RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 MAP2K2P36507 400 aa10.51□□□□□ -0.73
TPM4-210ENST00000588507 GRM1Q13255 1194 aa10.51□□□□□ -0.73
TPM4-210ENST00000588507 TRAK1Q9UPV9 953 aa10.51□□□□□ -0.73
TPM4-210ENST00000588507 CCDC61Q9Y6R9 512 aa10.51□□□□□ -0.73
TPM4-210ENST00000588507 CYP4F22Q6NT55 531 aa10.49□□□□□ -0.73
TPM4-210ENST00000588507 NLGN1Q8N2Q7 840 aa10.49□□□□□ -0.73
TPM4-210ENST00000588507 C4BP0C0L5 1744 aa10.48□□□□□ -0.73
TPM4-210ENST00000588507 TOGARAM1Q9Y4F4 1720 aa10.48□□□□□ -0.73
TPM4-210ENST00000588507 KCNH5Q8NCM2 988 aa10.48□□□□□ -0.73
TPM4-210ENST00000588507 TAF1LQ8IZX4 1826 aa10.48□□□□□ -0.73
TPM4-210ENST00000588507 UBR3Q6ZT12 1888 aa10.48□□□□□ -0.73
TPM4-210ENST00000588507 A0A0C4DFX4 3053 aa10.47□□□□□ -0.73
TPM4-210ENST00000588507 IQCA1LA6NCM1 817 aa10.47□□□□□ -0.73
TPM4-210ENST00000588507 TMF1P82094 1093 aa10.47□□□□□ -0.73
TPM4-210ENST00000588507 CDK19Q9BWU1 502 aa10.47□□□□□ -0.73
TPM4-210ENST00000588507 PARP3Q9Y6F1 533 aa10.47□□□□□ -0.73
TPM4-210ENST00000588507 TIAM2Q8IVF5 1701 aa10.47□□□□□ -0.73
TPM4-210ENST00000588507 DOT1LQ8TEK3 1739 aa10.47□□□□□ -0.73
TPM4-210ENST00000588507 AOC2O75106 756 aa10.46□□□□□ -0.73
TPM4-210ENST00000588507 CLEC11AQ9Y240 323 aa10.46□□□□□ -0.73
TPM4-210ENST00000588507 MEGF6O75095 1541 aa10.45□□□□□ -0.74
TPM4-210ENST00000588507 PALLDQ8WX93 1383 aa10.45□□□□□ -0.74
TPM4-210ENST00000588507 SOX12O15370 315 aa10.45□□□□□ -0.74
TPM4-210ENST00000588507 DDNO94850 711 aaPredicted RBP10.45□□□□□ -0.74
TPM4-210ENST00000588507 CNTROBQ8N137 903 aa10.45□□□□□ -0.74
TPM4-210ENST00000588507 TAF1DQ9H5J8 278 aaPredicted RBP10.45□□□□□ -0.74
TPM4-210ENST00000588507 CHRNA5P30532 468 aa10.44□□□□□ -0.74
TPM4-210ENST00000588507 BRPF1P55201 1214 aaPredicted RBP10.44□□□□□ -0.74
TPM4-210ENST00000588507 APLP2Q06481 763 aa10.44□□□□□ -0.74
TPM4-210ENST00000588507 EAPPQ56P03 285 aaPredicted RBP10.44□□□□□ -0.74
TPM4-210ENST00000588507 COLQQ9Y215 455 aaPredicted RBP10.44□□□□□ -0.74
TPM4-210ENST00000588507 CCDC88AQ3V6T2 1871 aa10.43□□□□□ -0.74
TPM4-210ENST00000588507 ERFEQ4G0M1 354 aa10.43□□□□□ -0.74
TPM4-210ENST00000588507 C4AP0C0L4 1744 aa10.42□□□□□ -0.74
TPM4-210ENST00000588507 TRIOBPQ9H2D6 2365 aa10.42□□□□□ -0.74
TPM4-210ENST00000588507 GNPATO15228 680 aa10.42□□□□□ -0.74
TPM4-210ENST00000588507 NBPF1Q3BBV0 1214 aa10.42□□□□□ -0.74
TPM4-210ENST00000588507 DDX21Q9NR30 783 aaKnown RBP eCLIP10.42□□□□□ -0.744e-7■■□□□ 12.4
TPM4-210ENST00000588507 HPS5Q9UPZ3 1129 aa10.42□□□□□ -0.74
TPM4-210ENST00000588507 NFKBIEO00221 500 aa10.41□□□□□ -0.74
TPM4-210ENST00000588507 MAP1SQ66K74 1059 aaPredicted RBP10.41□□□□□ -0.74
TPM4-210ENST00000588507 SMARCC1Q92922 1105 aaPredicted RBP10.41□□□□□ -0.74
TPM4-210ENST00000588507 TRAPPC3LQ5T215 181 aa10.4□□□□□ -0.74
TPM4-210ENST00000588507 CTU1Q7Z7A3 348 aaKnown RBP10.4□□□□□ -0.74
TPM4-210ENST00000588507 CIAPIN1Q6FI81 312 aa10.39□□□□□ -0.75
TPM4-210ENST00000588507 LINC00116Q8NCU8 138 aa10.39□□□□□ -0.75
TPM4-210ENST00000588507 ZCRB1Q8TBF4 217 aaKnown RBP10.39□□□□□ -0.75
TPM4-210ENST00000588507 ANKRD24Q8TF21 1146 aa10.39□□□□□ -0.75
TPM4-210ENST00000588507 L3MBTL3Q96JM7 780 aaPredicted RBP10.39□□□□□ -0.75
TPM4-210ENST00000588507 COL25A1Q9BXS0 654 aaPredicted RBP10.39□□□□□ -0.75
TPM4-210ENST00000588507 TLL2Q9Y6L7 1015 aa10.39□□□□□ -0.75
TPM4-210ENST00000588507 GYS1P13807 737 aa10.38□□□□□ -0.75
TPM4-210ENST00000588507 SZT2Q5T011 3432 aa10.38□□□□□ -0.75
TPM4-210ENST00000588507 SCN4AP35499 1836 aa10.37□□□□□ -0.75
TPM4-210ENST00000588507 ADGRB1O14514 1584 aa10.37□□□□□ -0.75
TPM4-210ENST00000588507 PNMA8AQ86V59 439 aaPredicted RBP10.37□□□□□ -0.75
TPM4-210ENST00000588507 SLC4A1APQ9BWU0 796 aaKnown RBP10.37□□□□□ -0.75
TPM4-210ENST00000588507 PRDM6Q9NQX0 595 aa10.37□□□□□ -0.75
TPM4-210ENST00000588507 EPHX2P34913 555 aa10.36□□□□□ -0.75
TPM4-210ENST00000588507 ITGAEP38570 1179 aa10.36□□□□□ -0.75
TPM4-210ENST00000588507 MPRIPQ6WCQ1 1025 aa10.36□□□□□ -0.75
TPM4-210ENST00000588507 TTLL6Q8N841 843 aa10.36□□□□□ -0.75
TPM4-210ENST00000588507 HACL1Q9UJ83 578 aa10.36□□□□□ -0.75
TPM4-210ENST00000588507 PKN2Q16513 984 aaKnown RBP10.35□□□□□ -0.75
TPM4-210ENST00000588507 RTCBQ9Y3I0 505 aaKnown RBP10.35□□□□□ -0.75
TPM4-210ENST00000588507 DICER1Q9UPY3 1922 aaKnown RBP10.35□□□□□ -0.75
TPM4-210ENST00000588507 LOC102724428A0A0B4J2F2 783 aa10.34□□□□□ -0.75
TPM4-210ENST00000588507 SIK1P57059 783 aa10.34□□□□□ -0.75
TPM4-210ENST00000588507 CST9Q5W186 159 aa10.34□□□□□ -0.75
TPM4-210ENST00000588507 ARHGEF1Q92888 912 aaKnown RBP10.34□□□□□ -0.75
TPM4-210ENST00000588507 CABP2Q9NPB3 220 aa10.34□□□□□ -0.75
TPM4-210ENST00000588507 ADAMTSL1Q8N6G6 1762 aa10.34□□□□□ -0.75
TPM4-210ENST00000588507 NFAT5O94916 1531 aa10.33□□□□□ -0.76
TPM4-210ENST00000588507 RFC4P35249 363 aa10.33□□□□□ -0.76
TPM4-210ENST00000588507 FMR1Q06787 632 aaKnown RBP eCLIP10.33□□□□□ -0.76
TPM4-210ENST00000588507 AKAP4Q5JQC9 854 aa10.33□□□□□ -0.76
TPM4-210ENST00000588507 SAGE1Q9NXZ1 904 aa10.33□□□□□ -0.76
TPM4-210ENST00000588507 ADRA2BP18089 450 aa10.32□□□□□ -0.76
TPM4-210ENST00000588507 SAPCD2Q86UD0 394 aa10.32□□□□□ -0.76
TPM4-210ENST00000588507 HHIPL1Q96JK4 782 aa10.32□□□□□ -0.76
TPM4-210ENST00000588507 COL9A1P20849 921 aa10.31□□□□□ -0.76
TPM4-210ENST00000588507 SRPK2P78362 688 aaKnown RBP10.31□□□□□ -0.76
TPM4-210ENST00000588507 NOGQ13253 232 aa10.31□□□□□ -0.76
TPM4-210ENST00000588507 ITPK1Q13572 414 aa10.31□□□□□ -0.76
TPM4-210ENST00000588507 CABP1Q9NZU7 370 aa10.31□□□□□ -0.76
TPM4-210ENST00000588507 ATP6V1AP38606 617 aa10.3□□□□□ -0.76
TPM4-210ENST00000588507 DDR1Q08345 913 aa10.3□□□□□ -0.76
TPM4-210ENST00000588507 OTUD5Q96G74 571 aa10.3□□□□□ -0.76
TPM4-210ENST00000588507 TTC21BQ7Z4L5 1316 aa10.3□□□□□ -0.76
TPM4-210ENST00000588507 CEP290O15078 2479 aa10.29□□□□□ -0.76
TPM4-210ENST00000588507 LTBP3Q9NS15 1303 aa10.29□□□□□ -0.76
TPM4-210ENST00000588507 COL6A3P12111 3177 aa10.28□□□□□ -0.76
TPM4-210ENST00000588507 PLA2G5P39877 138 aa10.28□□□□□ -0.76
TPM4-210ENST00000588507 ZIC5Q96T25 663 aa10.28□□□□□ -0.76
TPM4-210ENST00000588507 TAOK3Q9H2K8 898 aa10.28□□□□□ -0.76
TPM4-210ENST00000588507 TTC21AQ8NDW8 1320 aa10.28□□□□□ -0.76
TPM4-210ENST00000588507 TRPM7Q96QT4 1865 aa10.27□□□□□ -0.76
TPM4-210ENST00000588507 TRAF5O00463 557 aa10.27□□□□□ -0.77
TPM4-210ENST00000588507 TRPA1O75762 1119 aa10.27□□□□□ -0.77
TPM4-210ENST00000588507 PIGBQ92521 554 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms