RNA–Protein interactions for RNA: ENST00000588468.1

CNN1-207, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-207ENST00000588468 SIK1P57059 783 aa13.37□□□□□ -0.27
CNN1-207ENST00000588468 CNGB1Q14028 1251 aaPredicted RBP13.37□□□□□ -0.27
CNN1-207ENST00000588468 U2SURPO15042 1029 aaKnown RBP13.36□□□□□ -0.27
CNN1-207ENST00000588468 CABP4P57796 275 aa13.36□□□□□ -0.27
CNN1-207ENST00000588468 FLAD1Q8NFF5 587 aa13.36□□□□□ -0.27
CNN1-207ENST00000588468 ASAP1Q9ULH1 1129 aa13.36□□□□□ -0.27
CNN1-207ENST00000588468 NUDCQ9Y266 331 aa13.36□□□□□ -0.27
CNN1-207ENST00000588468 MAP3K5Q99683 1374 aa13.35□□□□□ -0.27
CNN1-207ENST00000588468 AK7Q96M32 723 aa13.35□□□□□ -0.27
CNN1-207ENST00000588468 SGIP1Q9BQI5 828 aa13.35□□□□□ -0.27
CNN1-207ENST00000588468 ATG3Q9NT62 314 aa13.35□□□□□ -0.27
CNN1-207ENST00000588468 MYH14Q7Z406 1995 aaKnown RBP13.34□□□□□ -0.27
CNN1-207ENST00000588468 C4AP0C0L4 1744 aa13.34□□□□□ -0.27
CNN1-207ENST00000588468 ZEB1P37275 1124 aaPredicted RBP13.34□□□□□ -0.27
CNN1-207ENST00000588468 GAS2L2Q8NHY3 880 aa13.34□□□□□ -0.27
CNN1-207ENST00000588468 ATF5Q9Y2D1 282 aaPredicted RBP13.34□□□□□ -0.27
CNN1-207ENST00000588468 MTHFSDQ2M296 383 aaKnown RBP13.33□□□□□ -0.28
CNN1-207ENST00000588468 LINC00116Q8NCU8 138 aa13.33□□□□□ -0.28
CNN1-207ENST00000588468 SSFA2P28290 1259 aa13.32□□□□□ -0.28
CNN1-207ENST00000588468 POLD1P28340 1107 aa13.32□□□□□ -0.28
CNN1-207ENST00000588468 ATP6V1AP38606 617 aa13.32□□□□□ -0.28
CNN1-207ENST00000588468 ITPK1Q13572 414 aa13.32□□□□□ -0.28
CNN1-207ENST00000588468 RSPH6AQ9H0K4 717 aa13.32□□□□□ -0.28
CNN1-207ENST00000588468 SLC52A2Q9HAB3 445 aa13.32□□□□□ -0.28
CNN1-207ENST00000588468 DLG5Q8TDM6 1919 aa13.32□□□□□ -0.28
CNN1-207ENST00000588468 KCPQ6ZWJ8 1503 aa13.32□□□□□ -0.28
CNN1-207ENST00000588468 RNMTO43148 476 aaKnown RBP13.31□□□□□ -0.28
CNN1-207ENST00000588468 COL23A1Q86Y22 540 aaPredicted RBP13.31□□□□□ -0.28
CNN1-207ENST00000588468 CNTNAP4Q9C0A0 1308 aa13.31□□□□□ -0.28
CNN1-207ENST00000588468 PRKAR2BP31323 418 aa13.3□□□□□ -0.28
CNN1-207ENST00000588468 RALBP1Q15311 655 aa13.3□□□□□ -0.28
CNN1-207ENST00000588468 NFATC2IPQ8NCF5 419 aa13.3□□□□□ -0.28
CNN1-207ENST00000588468 ARXQ96QS3 562 aa13.3□□□□□ -0.28
CNN1-207ENST00000588468 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.29□□□□□ -0.28
CNN1-207ENST00000588468 GNAT3A8MTJ3 354 aa13.29□□□□□ -0.28
CNN1-207ENST00000588468 GNPATO15228 680 aa13.29□□□□□ -0.28
CNN1-207ENST00000588468 FCHSD2O94868 740 aa13.29□□□□□ -0.28
CNN1-207ENST00000588468 U2AF1L5P0DN76 240 aaPredicted RBP13.29□□□□□ -0.28
CNN1-207ENST00000588468 U2AF1Q01081 240 aaKnown RBP eCLIP13.29□□□□□ -0.28
CNN1-207ENST00000588468 RC3H1Q5TC82 1133 aaKnown RBP13.29□□□□□ -0.28
CNN1-207ENST00000588468 SLC4A9Q96Q91 983 aa13.29□□□□□ -0.28
CNN1-207ENST00000588468 RBM42Q9BTD8 480 aaKnown RBP13.29□□□□□ -0.28
CNN1-207ENST00000588468 CEMIPQ8WUJ3 1361 aa13.29□□□□□ -0.28
CNN1-207ENST00000588468 MSH5O43196 834 aa13.28□□□□□ -0.28
CNN1-207ENST00000588468 ADRA2BP18089 450 aa13.28□□□□□ -0.28
CNN1-207ENST00000588468 FHDC1Q9C0D6 1143 aaPredicted RBP13.28□□□□□ -0.28
CNN1-207ENST00000588468 LGR6Q9HBX8 967 aa13.28□□□□□ -0.28
CNN1-207ENST00000588468 DDX10Q13206 875 aaKnown RBP13.27□□□□□ -0.29
CNN1-207ENST00000588468 CHD4Q14839 1912 aa13.27□□□□□ -0.29
CNN1-207ENST00000588468 DCAF8L1A6NGE4 600 aa13.26□□□□□ -0.29
CNN1-207ENST00000588468 PTCD1O75127 700 aaKnown RBP13.26□□□□□ -0.29
CNN1-207ENST00000588468 PHF14O94880 888 aa13.26□□□□□ -0.29
CNN1-207ENST00000588468 TEFQ10587 303 aa13.26□□□□□ -0.29
CNN1-207ENST00000588468 AMIGO3Q86WK7 504 aa13.26□□□□□ -0.29
CNN1-207ENST00000588468 MYBBP1AQ9BQG0 1328 aaKnown RBP13.26□□□□□ -0.29
CNN1-207ENST00000588468 KIF13BQ9NQT8 1826 aa13.26□□□□□ -0.29
CNN1-207ENST00000588468 RTCBQ9Y3I0 505 aaKnown RBP13.26□□□□□ -0.29
CNN1-207ENST00000588468 NEFMP07197 916 aa13.25□□□□□ -0.29
CNN1-207ENST00000588468 PHACTR3Q96KR7 559 aa13.25□□□□□ -0.29
CNN1-207ENST00000588468 SYT17Q9BSW7 474 aa13.25□□□□□ -0.29
CNN1-207ENST00000588468 LAMB4A4D0S4 1761 aa13.25□□□□□ -0.29
CNN1-207ENST00000588468 RPS6KA4O75676 772 aa13.24□□□□□ -0.29
CNN1-207ENST00000588468 CRKLP46109 303 aaKnown RBP13.24□□□□□ -0.29
CNN1-207ENST00000588468 MSL1Q68DK7 614 aa13.24□□□□□ -0.29
CNN1-207ENST00000588468 VSIG10Q8N0Z9 540 aa13.24□□□□□ -0.29
CNN1-207ENST00000588468 KDM3BQ7LBC6 1761 aa13.24□□□□□ -0.29
CNN1-207ENST00000588468 HTATSF1O43719 755 aaKnown RBP13.23□□□□□ -0.29
CNN1-207ENST00000588468 TTC5Q8N0Z6 440 aa13.23□□□□□ -0.29
CNN1-207ENST00000588468 IL17REQ8NFR9 667 aa13.23□□□□□ -0.29
CNN1-207ENST00000588468 PNNQ9H307 717 aaKnown RBP13.23□□□□□ -0.29
CNN1-207ENST00000588468 SCN7AQ01118 1682 aa13.23□□□□□ -0.29
CNN1-207ENST00000588468 GOLGB1Q14789 3259 aaKnown RBP13.23□□□□□ -0.29
CNN1-207ENST00000588468 SLC39A6Q13433 755 aa13.22□□□□□ -0.29
CNN1-207ENST00000588468 TRAPPC3LQ5T215 181 aa13.22□□□□□ -0.29
CNN1-207ENST00000588468 RTF1Q92541 710 aaKnown RBP13.22□□□□□ -0.29
CNN1-207ENST00000588468 CCDC87Q9NVE4 849 aa13.22□□□□□ -0.29
CNN1-207ENST00000588468 HEG1Q9ULI3 1381 aa13.21□□□□□ -0.29
CNN1-207ENST00000588468 DNAJC10Q8IXB1 793 aa13.21□□□□□ -0.29
CNN1-207ENST00000588468 SOS1Q07889 1333 aaPredicted RBP13.2□□□□□ -0.3
CNN1-207ENST00000588468 MAPK8IP3Q9UPT6 1336 aa13.2□□□□□ -0.3
CNN1-207ENST00000588468 KIAA1551Q9HCM1 1747 aa13.2□□□□□ -0.3
CNN1-207ENST00000588468 RFC4P35249 363 aa13.2□□□□□ -0.3
CNN1-207ENST00000588468 ZNF790Q6PG37 636 aa13.2□□□□□ -0.3
CNN1-207ENST00000588468 KLHL34Q8N239 644 aa13.2□□□□□ -0.3
CNN1-207ENST00000588468 CD2APQ9Y5K6 639 aa13.2□□□□□ -0.3
CNN1-207ENST00000588468 BCORQ6W2J9 1755 aa13.2□□□□□ -0.3
CNN1-207ENST00000588468 USP42Q9H9J4 1324 aaKnown RBP13.19□□□□□ -0.3
CNN1-207ENST00000588468 CYP19A1P11511 503 aaPredicted RBP13.19□□□□□ -0.3
CNN1-207ENST00000588468 NFE2L2Q16236 605 aa13.19□□□□□ -0.3
CNN1-207ENST00000588468 INTS5Q6P9B9 1019 aaKnown RBP13.19□□□□□ -0.3
CNN1-207ENST00000588468 SMIM5Q71RC9 77 aa13.19□□□□□ -0.3
CNN1-207ENST00000588468 NLGN1Q8N2Q7 840 aa13.19□□□□□ -0.3
CNN1-207ENST00000588468 ARHGEF1Q92888 912 aaKnown RBP13.19□□□□□ -0.3
CNN1-207ENST00000588468 FMNL2Q96PY5 1086 aa13.19□□□□□ -0.3
CNN1-207ENST00000588468 PLEKHF1Q96S99 279 aa13.19□□□□□ -0.3
CNN1-207ENST00000588468 C10orf71Q711Q0 1435 aa13.19□□□□□ -0.3
CNN1-207ENST00000588468 COL15A1P39059 1388 aa13.19□□□□□ -0.3
CNN1-207ENST00000588468 UTRNP46939 3433 aa13.18□□□□□ -0.3
CNN1-207ENST00000588468 BTBD11A6QL63 1104 aa13.18□□□□□ -0.3
CNN1-207ENST00000588468 STARD3NLO95772 234 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms