RNA–Protein interactions for RNA: ENST00000588428.5

NCLN-204, Transcript of nicalin, humanhuman

TSL 5

Gene NCLN, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-204ENST00000588428 MRC1P22897 1456 aa28.25■■■□□ 2.11
NCLN-204ENST00000588428 CICQ96RK0 1608 aaPredicted RBP28.24■■■□□ 2.11
NCLN-204ENST00000588428 COL5A3P25940 1745 aaPredicted RBP28.23■■■□□ 2.11
NCLN-204ENST00000588428 CABP4P57796 275 aa28.23■■■□□ 2.11
NCLN-204ENST00000588428 FLAD1Q8NFF5 587 aa28.22■■■□□ 2.11
NCLN-204ENST00000588428 U2SURPO15042 1029 aaKnown RBP28.2■■■□□ 2.1
NCLN-204ENST00000588428 MTHFSDQ2M296 383 aaKnown RBP28.2■■■□□ 2.1
NCLN-204ENST00000588428 COL23A1Q86Y22 540 aaPredicted RBP28.19■■■□□ 2.1
NCLN-204ENST00000588428 ATP6V1AP38606 617 aa28.18■■■□□ 2.1
NCLN-204ENST00000588428 ITPK1Q13572 414 aa28.18■■■□□ 2.1
NCLN-204ENST00000588428 LINC00116Q8NCU8 138 aa28.18■■■□□ 2.1
NCLN-204ENST00000588428 MAP3K5Q99683 1374 aa28.18■■■□□ 2.1
NCLN-204ENST00000588428 NFATC2IPQ8NCF5 419 aa28.17■■■□□ 2.1
NCLN-204ENST00000588428 AK7Q96M32 723 aa28.17■■■□□ 2.1
NCLN-204ENST00000588428 NUDCQ9Y266 331 aa28.17■■■□□ 2.1
NCLN-204ENST00000588428 ARXQ96QS3 562 aa28.16■■■□□ 2.1
NCLN-204ENST00000588428 RNMTO43148 476 aaKnown RBP28.15■■■□□ 2.1
NCLN-204ENST00000588428 SLC4A9Q96Q91 983 aa28.15■■■□□ 2.1
NCLN-204ENST00000588428 SLC52A2Q9HAB3 445 aa28.15■■■□□ 2.1
NCLN-204ENST00000588428 SSFA2P28290 1259 aa28.14■■■□□ 2.1
NCLN-204ENST00000588428 GAS2L2Q8NHY3 880 aa28.14■■■□□ 2.1
NCLN-204ENST00000588428 MYH14Q7Z406 1995 aaKnown RBP28.13■■■□□ 2.09
NCLN-204ENST00000588428 TJP1Q07157 1748 aa28.13■■■□□ 2.09
NCLN-204ENST00000588428 POLD1P28340 1107 aa28.13■■■□□ 2.09
NCLN-204ENST00000588428 RSPH6AQ9H0K4 717 aa28.13■■■□□ 2.09
NCLN-204ENST00000588428 LGR6Q9HBX8 967 aa28.13■■■□□ 2.09
NCLN-204ENST00000588428 SIPA1L3O60292 1781 aaPredicted RBP28.13■■■□□ 2.09
NCLN-204ENST00000588428 UBR2Q8IWV8 1755 aa28.11■■■□□ 2.09
NCLN-204ENST00000588428 FHDC1Q9C0D6 1143 aaPredicted RBP28.11■■■□□ 2.09
NCLN-204ENST00000588428 RC3H1Q5TC82 1133 aaKnown RBP28.1■■■□□ 2.09
NCLN-204ENST00000588428 AMIGO3Q86WK7 504 aa28.1■■■□□ 2.09
NCLN-204ENST00000588428 SYT17Q9BSW7 474 aa28.1■■■□□ 2.09
NCLN-204ENST00000588428 RBM42Q9BTD8 480 aaKnown RBP28.1■■■□□ 2.09
NCLN-204ENST00000588428 CNTNAP4Q9C0A0 1308 aa28.1■■■□□ 2.09
NCLN-204ENST00000588428 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.09■■■□□ 2.09
NCLN-204ENST00000588428 MSH5O43196 834 aa28.08■■■□□ 2.09
NCLN-204ENST00000588428 FCHSD2O94868 740 aa28.08■■■□□ 2.09
NCLN-204ENST00000588428 PRKAR2BP31323 418 aa28.08■■■□□ 2.09
NCLN-204ENST00000588428 GNAT3A8MTJ3 354 aa28.07■■■□□ 2.08
NCLN-204ENST00000588428 U2AF1L5P0DN76 240 aaPredicted RBP28.07■■■□□ 2.08
NCLN-204ENST00000588428 U2AF1Q01081 240 aaKnown RBP eCLIP28.07■■■□□ 2.08
NCLN-204ENST00000588428 KCPQ6ZWJ8 1503 aa28.07■■■□□ 2.08
NCLN-204ENST00000588428 GNPATO15228 680 aa28.06■■■□□ 2.08
NCLN-204ENST00000588428 ZEB1P37275 1124 aaPredicted RBP28.06■■■□□ 2.08
NCLN-204ENST00000588428 RALBP1Q15311 655 aa28.06■■■□□ 2.08
NCLN-204ENST00000588428 PHACTR3Q96KR7 559 aa28.05■■■□□ 2.08
NCLN-204ENST00000588428 CEMIPQ8WUJ3 1361 aa28.04■■■□□ 2.08
NCLN-204ENST00000588428 PTCD1O75127 700 aaKnown RBP28.04■■■□□ 2.08
NCLN-204ENST00000588428 C4AP0C0L4 1744 aa28.04■■■□□ 2.08
NCLN-204ENST00000588428 PHF14O94880 888 aa28.03■■■□□ 2.08
NCLN-204ENST00000588428 ADRA2BP18089 450 aa28.03■■■□□ 2.08
NCLN-204ENST00000588428 DDX10Q13206 875 aaKnown RBP28.03■■■□□ 2.08
NCLN-204ENST00000588428 IL17REQ8NFR9 667 aa28.02■■■□□ 2.08
NCLN-204ENST00000588428 RTCBQ9Y3I0 505 aaKnown RBP28.02■■■□□ 2.08
NCLN-204ENST00000588428 DCAF8L1A6NGE4 600 aa28.01■■■□□ 2.07
NCLN-204ENST00000588428 RPS6KA4O75676 772 aa28■■■□□ 2.07
NCLN-204ENST00000588428 MSL1Q68DK7 614 aa28■■■□□ 2.07
NCLN-204ENST00000588428 DLG5Q8TDM6 1919 aa27.99■■■□□ 2.07
NCLN-204ENST00000588428 SMIM5Q71RC9 77 aa27.99■■■□□ 2.07
NCLN-204ENST00000588428 TEFQ10587 303 aa27.98■■■□□ 2.07
NCLN-204ENST00000588428 SLC39A6Q13433 755 aa27.98■■■□□ 2.07
NCLN-204ENST00000588428 VSIG10Q8N0Z9 540 aa27.98■■■□□ 2.07
NCLN-204ENST00000588428 CRKLP46109 303 aaKnown RBP27.97■■■□□ 2.07
NCLN-204ENST00000588428 TRAPPC3LQ5T215 181 aa27.97■■■□□ 2.07
NCLN-204ENST00000588428 HTATSF1O43719 755 aaKnown RBP27.94■■■□□ 2.06
NCLN-204ENST00000588428 DNAJC10Q8IXB1 793 aa27.94■■■□□ 2.06
NCLN-204ENST00000588428 MYBBP1AQ9BQG0 1328 aaKnown RBP27.93■■■□□ 2.06
NCLN-204ENST00000588428 CHD4Q14839 1912 aa27.93■■■□□ 2.06
NCLN-204ENST00000588428 ARHGEF1Q92888 912 aaKnown RBP27.93■■■□□ 2.06
NCLN-204ENST00000588428 INTS5Q6P9B9 1019 aaKnown RBP27.92■■■□□ 2.06
NCLN-204ENST00000588428 ZNF790Q6PG37 636 aa27.92■■■□□ 2.06
NCLN-204ENST00000588428 TTC5Q8N0Z6 440 aa27.92■■■□□ 2.06
NCLN-204ENST00000588428 CD2APQ9Y5K6 639 aa27.92■■■□□ 2.06
NCLN-204ENST00000588428 KIF13BQ9NQT8 1826 aa27.92■■■□□ 2.06
NCLN-204ENST00000588428 CYP19A1P11511 503 aaPredicted RBP27.91■■■□□ 2.06
NCLN-204ENST00000588428 PLEKHF1Q96S99 279 aa27.91■■■□□ 2.06
NCLN-204ENST00000588428 PNNQ9H307 717 aaKnown RBP27.9■■■□□ 2.06
NCLN-204ENST00000588428 CCDC87Q9NVE4 849 aa27.9■■■□□ 2.06
NCLN-204ENST00000588428 HEG1Q9ULI3 1381 aa27.89■■■□□ 2.06
NCLN-204ENST00000588428 NEFMP07197 916 aa27.89■■■□□ 2.06
NCLN-204ENST00000588428 RFC4P35249 363 aa27.89■■■□□ 2.06
NCLN-204ENST00000588428 KLHL34Q8N239 644 aa27.89■■■□□ 2.06
NCLN-204ENST00000588428 NLGN1Q8N2Q7 840 aa27.89■■■□□ 2.06
NCLN-204ENST00000588428 RTF1Q92541 710 aaKnown RBP27.89■■■□□ 2.06
NCLN-204ENST00000588428 SOS1Q07889 1333 aaPredicted RBP27.88■■■□□ 2.05
NCLN-204ENST00000588428 GYS1P13807 737 aa27.87■■■□□ 2.05
NCLN-204ENST00000588428 NLGN2Q8NFZ4 835 aa27.87■■■□□ 2.05
NCLN-204ENST00000588428 ZNF496Q96IT1 587 aaPredicted RBP27.87■■■□□ 2.05
NCLN-204ENST00000588428 USP42Q9H9J4 1324 aaKnown RBP27.86■■■□□ 2.05
NCLN-204ENST00000588428 TEX13AQ9BXU3 409 aaPredicted RBP27.85■■■□□ 2.05
NCLN-204ENST00000588428 BTBD11A6QL63 1104 aa27.84■■■□□ 2.05
NCLN-204ENST00000588428 MMP10P09238 476 aa27.84■■■□□ 2.05
NCLN-204ENST00000588428 MCM10Q7L590 875 aa27.84■■■□□ 2.05
NCLN-204ENST00000588428 FMNL2Q96PY5 1086 aa27.84■■■□□ 2.05
NCLN-204ENST00000588428 STARD3NLO95772 234 aa27.83■■■□□ 2.05
NCLN-204ENST00000588428 KDM3BQ7LBC6 1761 aa27.82■■■□□ 2.04
NCLN-204ENST00000588428 NFE2L2Q16236 605 aa27.82■■■□□ 2.04
NCLN-204ENST00000588428 PRKRIP1Q9H875 184 aaPredicted RBP27.82■■■□□ 2.04
NCLN-204ENST00000588428 ZBTB1Q9Y2K1 713 aa27.82■■■□□ 2.04
NCLN-204ENST00000588428 COL15A1P39059 1388 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms