RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, human

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-219	ENST00000588411	HMOX1	P09601	288 aa		29.4	■■■□□ 2.3
CIRBP-219	ENST00000588411	TAF1L	Q8IZX4	1826 aa		29.4	■■■□□ 2.3
CIRBP-219	ENST00000588411	AKAP4	Q5JQC9	854 aa		29.39	■■■□□ 2.3
CIRBP-219	ENST00000588411	LINC00116	Q8NCU8	138 aa		29.38	■■■□□ 2.29
CIRBP-219	ENST00000588411	KLHL34	Q8N239	644 aa		29.37	■■■□□ 2.29
CIRBP-219	ENST00000588411	CFAP53	Q96M91	514 aa		29.37	■■■□□ 2.29
CIRBP-219	ENST00000588411	SSFA2	P28290	1259 aa		29.36	■■■□□ 2.29
CIRBP-219	ENST00000588411	RBM42	Q9BTD8	480 aa	Known RBP	29.36	■■■□□ 2.29
CIRBP-219	ENST00000588411	PHF14	O94880	888 aa		29.35	■■■□□ 2.29
CIRBP-219	ENST00000588411	ITPK1	Q13572	414 aa		29.35	■■■□□ 2.29
CIRBP-219	ENST00000588411	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	29.34	■■■□□ 2.29
CIRBP-219	ENST00000588411	U2SURP	O15042	1029 aa	Known RBP	29.34	■■■□□ 2.29
CIRBP-219	ENST00000588411	COL24A1	Q17RW2	1714 aa		29.34	■■■□□ 2.29
CIRBP-219	ENST00000588411	GNPAT	O15228	680 aa		29.33	■■■□□ 2.29
CIRBP-219	ENST00000588411	MSL1	Q68DK7	614 aa		29.33	■■■□□ 2.29
CIRBP-219	ENST00000588411	NFATC2IP	Q8NCF5	419 aa		29.33	■■■□□ 2.29
CIRBP-219	ENST00000588411	COL3A1	P02461	1466 aa	Predicted RBP	29.32	■■■□□ 2.28
CIRBP-219	ENST00000588411	YY1	P25490	414 aa		29.29	■■■□□ 2.28
CIRBP-219	ENST00000588411	MTHFSD	Q2M296	383 aa	Known RBP	29.28	■■■□□ 2.28
CIRBP-219	ENST00000588411	AMIGO3	Q86WK7	504 aa		29.28	■■■□□ 2.28
CIRBP-219	ENST00000588411	SLC52A2	Q9HAB3	445 aa		29.27	■■■□□ 2.28
CIRBP-219	ENST00000588411	NUDC	Q9Y266	331 aa		29.27	■■■□□ 2.28
CIRBP-219	ENST00000588411	RTCB	Q9Y3I0	505 aa	Known RBP	29.27	■■■□□ 2.28
CIRBP-219	ENST00000588411	ZNF831	Q5JPB2	1677 aa		29.27	■■■□□ 2.28
CIRBP-219	ENST00000588411	UBR3	Q6ZT12	1888 aa		29.27	■■■□□ 2.28
CIRBP-219	ENST00000588411	RNMT	O43148	476 aa	Known RBP	29.26	■■■□□ 2.27
CIRBP-219	ENST00000588411	PTCD1	O75127	700 aa	Known RBP	29.26	■■■□□ 2.27
CIRBP-219	ENST00000588411	RC3H1	Q5TC82	1133 aa	Known RBP	29.26	■■■□□ 2.27
CIRBP-219	ENST00000588411	SLC4A9	Q96Q91	983 aa		29.26	■■■□□ 2.27
CIRBP-219	ENST00000588411	CNTNAP4	Q9C0A0	1308 aa		29.25	■■■□□ 2.27
CIRBP-219	ENST00000588411	GAS2L2	Q8NHY3	880 aa		29.25	■■■□□ 2.27
CIRBP-219	ENST00000588411	SCN11A	Q9UI33	1791 aa		29.24	■■■□□ 2.27
CIRBP-219	ENST00000588411	PPP2R1A	P30153	589 aa		29.24	■■■□□ 2.27
CIRBP-219	ENST00000588411	LGR6	Q9HBX8	967 aa		29.24	■■■□□ 2.27
CIRBP-219	ENST00000588411	ADRA2B	P18089	450 aa		29.23	■■■□□ 2.27
CIRBP-219	ENST00000588411	GPR162	Q16538	588 aa		29.23	■■■□□ 2.27
CIRBP-219	ENST00000588411	TRAPPC3L	Q5T215	181 aa		29.23	■■■□□ 2.27
CIRBP-219	ENST00000588411	SMIM5	Q71RC9	77 aa		29.23	■■■□□ 2.27
CIRBP-219	ENST00000588411	MRC1	P22897	1456 aa		29.21	■■■□□ 2.27
CIRBP-219	ENST00000588411	CD2AP	Q9Y5K6	639 aa		29.2	■■■□□ 2.26
CIRBP-219	ENST00000588411	RPS6KA4	O75676	772 aa		29.19	■■■□□ 2.26
CIRBP-219	ENST00000588411	NLGN2	Q8NFZ4	835 aa		29.19	■■■□□ 2.26
CIRBP-219	ENST00000588411	GNAT3	A8MTJ3	354 aa		29.17	■■■□□ 2.26
CIRBP-219	ENST00000588411	PELP1	Q8IZL8	1130 aa	Known RBP	29.17	■■■□□ 2.26
CIRBP-219	ENST00000588411	U2AF1L5	P0DN76	240 aa	Predicted RBP	29.16	■■■□□ 2.26
CIRBP-219	ENST00000588411	PRKAR2B	P31323	418 aa		29.16	■■■□□ 2.26
CIRBP-219	ENST00000588411	RFC4	P35249	363 aa		29.16	■■■□□ 2.26
CIRBP-219	ENST00000588411	U2AF1	Q01081	240 aa	Known RBP eCLIP	29.16	■■■□□ 2.26
CIRBP-219	ENST00000588411	COL5A3	P25940	1745 aa	Predicted RBP	29.16	■■■□□ 2.26
CIRBP-219	ENST00000588411	CRKL	P46109	303 aa	Known RBP	29.15	■■■□□ 2.26
CIRBP-219	ENST00000588411	RSPH6A	Q9H0K4	717 aa		29.15	■■■□□ 2.26
CIRBP-219	ENST00000588411	TEF	Q10587	303 aa		29.14	■■■□□ 2.26
CIRBP-219	ENST00000588411	NLGN1	Q8N2Q7	840 aa		29.14	■■■□□ 2.26
CIRBP-219	ENST00000588411	ARHGEF1	Q92888	912 aa	Known RBP	29.14	■■■□□ 2.26
CIRBP-219	ENST00000588411	ADAMTS7	Q9UKP4	1686 aa		29.13	■■■□□ 2.25
CIRBP-219	ENST00000588411	SLC39A6	Q13433	755 aa		29.13	■■■□□ 2.25
CIRBP-219	ENST00000588411	TTC5	Q8N0Z6	440 aa		29.12	■■■□□ 2.25
CIRBP-219	ENST00000588411	FCHSD2	O94868	740 aa		29.11	■■■□□ 2.25
CIRBP-219	ENST00000588411	CIC	Q96RK0	1608 aa	Predicted RBP	29.11	■■■□□ 2.25
CIRBP-219	ENST00000588411	MMP10	P09238	476 aa		29.1	■■■□□ 2.25
CIRBP-219	ENST00000588411	DNAJC10	Q8IXB1	793 aa		29.1	■■■□□ 2.25
CIRBP-219	ENST00000588411	GRIN3B	O60391	1043 aa		29.09	■■■□□ 2.25
CIRBP-219	ENST00000588411	VSIG10	Q8N0Z9	540 aa		29.09	■■■□□ 2.25
CIRBP-219	ENST00000588411	IL17RE	Q8NFR9	667 aa		29.08	■■■□□ 2.25
CIRBP-219	ENST00000588411	PHACTR3	Q96KR7	559 aa		29.08	■■■□□ 2.25
CIRBP-219	ENST00000588411	CCDC87	Q9NVE4	849 aa		29.08	■■■□□ 2.25
CIRBP-219	ENST00000588411	TJP1	Q07157	1748 aa		29.08	■■■□□ 2.25
CIRBP-219	ENST00000588411	KCP	Q6ZWJ8	1503 aa		29.06	■■■□□ 2.24
CIRBP-219	ENST00000588411	INTS5	Q6P9B9	1019 aa	Known RBP	29.06	■■■□□ 2.24
CIRBP-219	ENST00000588411	VIRMA	Q69YN4	1812 aa	Known RBP	29.06	■■■□□ 2.24
CIRBP-219	ENST00000588411	MYH14	Q7Z406	1995 aa	Known RBP	29.05	■■■□□ 2.24
CIRBP-219	ENST00000588411	NEFM	P07197	916 aa		29.05	■■■□□ 2.24
CIRBP-219	ENST00000588411	GYS1	P13807	737 aa		29.05	■■■□□ 2.24
CIRBP-219	ENST00000588411	RTF1	Q92541	710 aa	Known RBP	29.05	■■■□□ 2.24
CIRBP-219	ENST00000588411	UTRN	P46939	3433 aa		29.04	■■■□□ 2.24
CIRBP-219	ENST00000588411	CYP19A1	P11511	503 aa	Predicted RBP	29.04	■■■□□ 2.24
CIRBP-219	ENST00000588411	CEMIP	Q8WUJ3	1361 aa		29.03	■■■□□ 2.24
CIRBP-219	ENST00000588411	PARP3	Q9Y6F1	533 aa		29.03	■■■□□ 2.24
CIRBP-219	ENST00000588411	USP42	Q9H9J4	1324 aa	Known RBP	29.02	■■■□□ 2.24
CIRBP-219	ENST00000588411	STARD3NL	O95772	234 aa		29.02	■■■□□ 2.24
CIRBP-219	ENST00000588411	ZNF790	Q6PG37	636 aa		29.02	■■■□□ 2.24
CIRBP-219	ENST00000588411	ZPR1	O75312	459 aa		29.01	■■■□□ 2.23
CIRBP-219	ENST00000588411	YBX3	P16989	372 aa	Known RBP eCLIP	29.01	■■■□□ 2.23
CIRBP-219	ENST00000588411	CHD4	Q14839	1912 aa		29	■■■□□ 2.23
CIRBP-219	ENST00000588411	SOS1	Q07889	1333 aa	Predicted RBP	29	■■■□□ 2.23
CIRBP-219	ENST00000588411	RALBP1	Q15311	655 aa		29	■■■□□ 2.23
CIRBP-219	ENST00000588411	TEX13A	Q9BXU3	409 aa	Predicted RBP	29	■■■□□ 2.23
CIRBP-219	ENST00000588411	SRP68	Q9UHB9	627 aa	Known RBP	28.99	■■■□□ 2.23
CIRBP-219	ENST00000588411	C4A	P0C0L4	1744 aa		28.98	■■■□□ 2.23
CIRBP-219	ENST00000588411	BTBD11	A6QL63	1104 aa		28.98	■■■□□ 2.23
CIRBP-219	ENST00000588411	HTATSF1	O43719	755 aa	Known RBP	28.98	■■■□□ 2.23
CIRBP-219	ENST00000588411	ZNF496	Q96IT1	587 aa	Predicted RBP	28.98	■■■□□ 2.23
CIRBP-219	ENST00000588411	FMNL2	Q96PY5	1086 aa		28.98	■■■□□ 2.23
CIRBP-219	ENST00000588411	PNN	Q9H307	717 aa	Known RBP	28.97	■■■□□ 2.23
CIRBP-219	ENST00000588411	ZBTB1	Q9Y2K1	713 aa		28.97	■■■□□ 2.23
CIRBP-219	ENST00000588411	UBR2	Q8IWV8	1755 aa		28.97	■■■□□ 2.23
CIRBP-219	ENST00000588411	HEG1	Q9ULI3	1381 aa		28.97	■■■□□ 2.23
CIRBP-219	ENST00000588411	DDX10	Q13206	875 aa	Known RBP	28.96	■■■□□ 2.23
CIRBP-219	ENST00000588411	GOLGB1	Q14789	3259 aa	Known RBP	28.96	■■■□□ 2.23
CIRBP-219	ENST00000588411	TGFB2	P61812	414 aa		28.95	■■■□□ 2.22

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