RNA–Protein interactions for RNA: ENST00000588234.5

C19orf53-202, Transcript of chromosome 19 open reading frame 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C19orf53, Length 873 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf53-202ENST00000588234 HMGB2P26583 209 aaKnown RBP17.42■□□□□ 0.38
C19orf53-202ENST00000588234 RXRBP28702 533 aa17.42■□□□□ 0.38
C19orf53-202ENST00000588234 MARCH10Q8NA82 808 aaPredicted RBP17.42■□□□□ 0.38
C19orf53-202ENST00000588234 THUMPD2Q9BTF0 503 aaKnown RBP17.42■□□□□ 0.38
C19orf53-202ENST00000588234 SIPA1L3O60292 1781 aaPredicted RBP17.42■□□□□ 0.38
C19orf53-202ENST00000588234 BTBD11A6QL63 1104 aa17.41■□□□□ 0.38
C19orf53-202ENST00000588234 SEPT12Q8IYM1 358 aa17.41■□□□□ 0.38
C19orf53-202ENST00000588234 ALDH1L2Q3SY69 923 aa17.4■□□□□ 0.38
C19orf53-202ENST00000588234 ZNF790Q6PG37 636 aa17.4■□□□□ 0.38
C19orf53-202ENST00000588234 NFATC2IPQ8NCF5 419 aa17.4■□□□□ 0.38
C19orf53-202ENST00000588234 VSIG10Q8N0Z9 540 aa17.39■□□□□ 0.37
C19orf53-202ENST00000588234 TMOD3Q9NYL9 352 aa17.39■□□□□ 0.37
C19orf53-202ENST00000588234 RGS17Q9UGC6 210 aaPredicted RBP17.39■□□□□ 0.37
C19orf53-202ENST00000588234 EIF4A1P60842 406 aaKnown RBP17.38■□□□□ 0.37
C19orf53-202ENST00000588234 RNF123Q5XPI4 1314 aa17.38■□□□□ 0.37
C19orf53-202ENST00000588234 KDM3BQ7LBC6 1761 aa17.38■□□□□ 0.37
C19orf53-202ENST00000588234 VAMP4O75379 141 aa17.37■□□□□ 0.37
C19orf53-202ENST00000588234 EXOSC9Q06265 439 aaKnown RBP17.37■□□□□ 0.37
C19orf53-202ENST00000588234 FAM196AQ6ZSG2 479 aa17.37■□□□□ 0.37
C19orf53-202ENST00000588234 ILDR1Q86SU0 546 aaPredicted RBP17.37■□□□□ 0.37
C19orf53-202ENST00000588234 TSR2Q969E8 191 aaKnown RBP17.37■□□□□ 0.37
C19orf53-202ENST00000588234 RCAN3Q9UKA8 241 aa17.37■□□□□ 0.37
C19orf53-202ENST00000588234 VIRMAQ69YN4 1812 aaKnown RBP17.37■□□□□ 0.37
C19orf53-202ENST00000588234 SMARCC1Q92922 1105 aaPredicted RBP17.36■□□□□ 0.37
C19orf53-202ENST00000588234 TEX13AQ9BXU3 409 aaPredicted RBP17.36■□□□□ 0.37
C19orf53-202ENST00000588234 LAS1LQ9Y4W2 734 aaKnown RBP17.36■□□□□ 0.37
C19orf53-202ENST00000588234 TWISTNBQ3B726 338 aaPredicted RBP17.35■□□□□ 0.37
C19orf53-202ENST00000588234 KRT27Q7Z3Y8 459 aa17.35■□□□□ 0.37
C19orf53-202ENST00000588234 TTC5Q8N0Z6 440 aa17.35■□□□□ 0.37
C19orf53-202ENST00000588234 FMNL2Q96PY5 1086 aa17.35■□□□□ 0.37
C19orf53-202ENST00000588234 SENP3-EIF4A1A0A087X0R7 540 aa17.34■□□□□ 0.37
C19orf53-202ENST00000588234 PIGBQ92521 554 aa17.34■□□□□ 0.37
C19orf53-202ENST00000588234 PAPPAQ13219 1627 aa17.33■□□□□ 0.37
C19orf53-202ENST00000588234 ERBB4Q15303 1308 aa17.33■□□□□ 0.36
C19orf53-202ENST00000588234 GIGYF1O75420 1035 aaPredicted RBP17.33■□□□□ 0.36
C19orf53-202ENST00000588234 SNRPA1P09661 255 aaKnown RBP17.33■□□□□ 0.36
C19orf53-202ENST00000588234 RARSP54136 660 aaKnown RBP17.33■□□□□ 0.36
C19orf53-202ENST00000588234 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.33■□□□□ 0.36
C19orf53-202ENST00000588234 TOGARAM1Q9Y4F4 1720 aa17.33■□□□□ 0.36
C19orf53-202ENST00000588234 A0A0G2JS52 829 aa17.32■□□□□ 0.36
C19orf53-202ENST00000588234 PRIM1P49642 420 aaKnown RBP17.32■□□□□ 0.36
C19orf53-202ENST00000588234 MYT1Q01538 1121 aa17.32■□□□□ 0.36
C19orf53-202ENST00000588234 C8orf58Q8NAV2 365 aa17.32■□□□□ 0.36
C19orf53-202ENST00000588234 BCL11BQ9C0K0 894 aaPredicted RBP17.32■□□□□ 0.36
C19orf53-202ENST00000588234 CCDC30Q5VVM6 783 aa17.31■□□□□ 0.36
C19orf53-202ENST00000588234 POTEAQ6S8J7 498 aa17.31■□□□□ 0.36
C19orf53-202ENST00000588234 ARHGAP45Q92619 1136 aa17.31■□□□□ 0.36
C19orf53-202ENST00000588234 UBR2Q8IWV8 1755 aa17.3■□□□□ 0.36
C19orf53-202ENST00000588234 ZNF831Q5JPB2 1677 aa17.3■□□□□ 0.36
C19orf53-202ENST00000588234 KIF16BQ96L93 1317 aa17.3■□□□□ 0.36
C19orf53-202ENST00000588234 MS4A1P11836 297 aa17.3■□□□□ 0.36
C19orf53-202ENST00000588234 MIS18AQ9NYP9 233 aa17.3■□□□□ 0.36
C19orf53-202ENST00000588234 CICQ96RK0 1608 aaPredicted RBP17.29■□□□□ 0.36
C19orf53-202ENST00000588234 ITGB4P16144 1822 aa17.29■□□□□ 0.36
C19orf53-202ENST00000588234 ATG3Q9NT62 314 aa17.29■□□□□ 0.36
C19orf53-202ENST00000588234 NHSQ6T4R5 1651 aa17.29■□□□□ 0.36
C19orf53-202ENST00000588234 CACNA1FO60840 1977 aa17.28■□□□□ 0.36
C19orf53-202ENST00000588234 KCPQ6ZWJ8 1503 aa17.28■□□□□ 0.36
C19orf53-202ENST00000588234 IPO8O15397 1037 aaKnown RBP17.28■□□□□ 0.36
C19orf53-202ENST00000588234 TSPYL6Q8N831 410 aa17.28■□□□□ 0.36
C19orf53-202ENST00000588234 ZNF496Q96IT1 587 aaPredicted RBP17.28■□□□□ 0.36
C19orf53-202ENST00000588234 RGS12O14924 1447 aa17.28■□□□□ 0.36
C19orf53-202ENST00000588234 DOT1LQ8TEK3 1739 aa17.27■□□□□ 0.36
C19orf53-202ENST00000588234 ERICH6BQ5W0A0 696 aa17.27■□□□□ 0.36
C19orf53-202ENST00000588234 PDE3AQ14432 1141 aa17.26■□□□□ 0.35
C19orf53-202ENST00000588234 STK31Q9BXU1 1019 aa17.26■□□□□ 0.35
C19orf53-202ENST00000588234 DBF4Q9UBU7 674 aaPredicted RBP17.26■□□□□ 0.35
C19orf53-202ENST00000588234 PTPRCP08575 1304 aa17.25■□□□□ 0.35
C19orf53-202ENST00000588234 KCNQ3O43525 872 aa17.25■□□□□ 0.35
C19orf53-202ENST00000588234 SLC39A6Q13433 755 aa17.25■□□□□ 0.35
C19orf53-202ENST00000588234 SSH1Q8WYL5 1049 aa17.25■□□□□ 0.35
C19orf53-202ENST00000588234 ASAP1Q9ULH1 1129 aa17.25■□□□□ 0.35
C19orf53-202ENST00000588234 STARD3NLO95772 234 aa17.24■□□□□ 0.35
C19orf53-202ENST00000588234 HDGFL1Q5TGJ6 251 aa17.24■□□□□ 0.35
C19orf53-202ENST00000588234 MRPL50Q8N5N7 158 aaKnown RBP17.24■□□□□ 0.35
C19orf53-202ENST00000588234 DDX21Q9NR30 783 aaKnown RBP eCLIP17.24■□□□□ 0.35
C19orf53-202ENST00000588234 PLSCR1O15162 318 aa17.23■□□□□ 0.35
C19orf53-202ENST00000588234 RRP1P56182 461 aaKnown RBP17.23■□□□□ 0.35
C19orf53-202ENST00000588234 AAMPQ13685 434 aa17.23■□□□□ 0.35
C19orf53-202ENST00000588234 SYTL4Q96C24 671 aaPredicted RBP17.23■□□□□ 0.35
C19orf53-202ENST00000588234 SMC4Q9NTJ3 1288 aa17.23■□□□□ 0.35
C19orf53-202ENST00000588234 HYPKQ9NX55 129 aa17.23■□□□□ 0.35
C19orf53-202ENST00000588234 IBTKQ9P2D0 1353 aaPredicted RBP17.23■□□□□ 0.35
C19orf53-202ENST00000588234 SBF2Q86WG5 1849 aa17.23■□□□□ 0.35
C19orf53-202ENST00000588234 KAT6BQ8WYB5 2073 aa17.22■□□□□ 0.35
C19orf53-202ENST00000588234 BRWD3Q6RI45 1802 aa17.22■□□□□ 0.35
C19orf53-202ENST00000588234 PALLDQ8WX93 1383 aa17.22■□□□□ 0.35
C19orf53-202ENST00000588234 LOC102724428A0A0B4J2F2 783 aa17.21■□□□□ 0.35
C19orf53-202ENST00000588234 RGL2O15211 777 aa17.21■□□□□ 0.35
C19orf53-202ENST00000588234 KCNQ2O43526 872 aa17.21■□□□□ 0.35
C19orf53-202ENST00000588234 SIK1P57059 783 aa17.21■□□□□ 0.35
C19orf53-202ENST00000588234 KRT24Q2M2I5 525 aa17.21■□□□□ 0.35
C19orf53-202ENST00000588234 SLC27A3Q5K4L6 730 aa17.21■□□□□ 0.35
C19orf53-202ENST00000588234 ZKSCAN2Q63HK3 967 aa17.21■□□□□ 0.35
C19orf53-202ENST00000588234 ACSBG1Q96GR2 724 aa17.21■□□□□ 0.35
C19orf53-202ENST00000588234 API5Q9BZZ5 524 aaKnown RBP17.21■□□□□ 0.35
C19orf53-202ENST00000588234 SUPT16HQ9Y5B9 1047 aaKnown RBP17.21■□□□□ 0.35
C19orf53-202ENST00000588234 ELL2O00472 640 aaPredicted RBP17.2■□□□□ 0.34
C19orf53-202ENST00000588234 RC3H1Q5TC82 1133 aaKnown RBP17.2■□□□□ 0.34
C19orf53-202ENST00000588234 CCDC125Q86Z20 511 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms