RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 HSP90AB1P08238 724 aaKnown RBP14.66□□□□□ -0.06
VMP1-207ENST00000588131 NKX1-1Q15270 411 aaPredicted RBP14.66□□□□□ -0.06
VMP1-207ENST00000588131 TAF7Q15545 349 aaPredicted RBP14.66□□□□□ -0.06
VMP1-207ENST00000588131 FAM98CQ17RN3 349 aaKnown RBP14.66□□□□□ -0.06
VMP1-207ENST00000588131 DCAF5Q96JK2 942 aa14.66□□□□□ -0.06
VMP1-207ENST00000588131 TSPYL4Q9UJ04 414 aa14.66□□□□□ -0.06
VMP1-207ENST00000588131 EXOC5O00471 708 aa14.65□□□□□ -0.06
VMP1-207ENST00000588131 TEFQ10587 303 aa14.65□□□□□ -0.06
VMP1-207ENST00000588131 RNF39Q9H2S5 420 aa14.65□□□□□ -0.06
VMP1-207ENST00000588131 DDB1Q16531 1140 aa14.64□□□□□ -0.07
VMP1-207ENST00000588131 KRT24Q2M2I5 525 aa14.64□□□□□ -0.07
VMP1-207ENST00000588131 TSPYL6Q8N831 410 aa14.64□□□□□ -0.07
VMP1-207ENST00000588131 C8orf58Q8NAV2 365 aa14.64□□□□□ -0.07
VMP1-207ENST00000588131 GJD4Q96KN9 370 aaPredicted RBP14.64□□□□□ -0.07
VMP1-207ENST00000588131 SLC52A2Q9HAB3 445 aa14.64□□□□□ -0.07
VMP1-207ENST00000588131 TRPC5Q9UL62 973 aaPredicted RBP14.64□□□□□ -0.07
VMP1-207ENST00000588131 BABAM1Q9NWV8 329 aa14.63□□□□□ -0.07
VMP1-207ENST00000588131 RNF123Q5XPI4 1314 aa14.63□□□□□ -0.07
VMP1-207ENST00000588131 BTBD11A6QL63 1104 aa14.62□□□□□ -0.07
VMP1-207ENST00000588131 KCNQ3O43525 872 aa14.62□□□□□ -0.07
VMP1-207ENST00000588131 DOT1LQ8TEK3 1739 aa14.62□□□□□ -0.07
VMP1-207ENST00000588131 ELL2O00472 640 aaPredicted RBP14.61□□□□□ -0.07
VMP1-207ENST00000588131 CT47B1P0C2W7 299 aaPredicted RBP14.61□□□□□ -0.07
VMP1-207ENST00000588131 RARSP54136 660 aaKnown RBP14.61□□□□□ -0.07
VMP1-207ENST00000588131 CABP4P57796 275 aa14.61□□□□□ -0.07
VMP1-207ENST00000588131 TWISTNBQ3B726 338 aaPredicted RBP14.61□□□□□ -0.07
VMP1-207ENST00000588131 MARCH10Q8NA82 808 aaPredicted RBP14.61□□□□□ -0.07
VMP1-207ENST00000588131 NFATC2IPQ8NCF5 419 aa14.61□□□□□ -0.07
VMP1-207ENST00000588131 QTRT2Q9H974 415 aaKnown RBP14.61□□□□□ -0.07
VMP1-207ENST00000588131 PAPPAQ13219 1627 aa14.61□□□□□ -0.07
VMP1-207ENST00000588131 ITGB4P16144 1822 aa14.6□□□□□ -0.07
VMP1-207ENST00000588131 ERVV-2B6SEH9 535 aa14.6□□□□□ -0.07
VMP1-207ENST00000588131 VAMP4O75379 141 aa14.6□□□□□ -0.07
VMP1-207ENST00000588131 BCAR3O75815 825 aa14.6□□□□□ -0.07
VMP1-207ENST00000588131 A0A0G2JS52 829 aa14.59□□□□□ -0.07
VMP1-207ENST00000588131 RRP1P56182 461 aaKnown RBP14.59□□□□□ -0.07
VMP1-207ENST00000588131 EIF4A1P60842 406 aaKnown RBP14.59□□□□□ -0.07
VMP1-207ENST00000588131 MYT1Q01538 1121 aa14.59□□□□□ -0.07
VMP1-207ENST00000588131 ONECUT3O60422 494 aaPredicted RBP14.58□□□□□ -0.08
VMP1-207ENST00000588131 SLC39A6Q13433 755 aa14.58□□□□□ -0.08
VMP1-207ENST00000588131 BCL2L13Q9BXK5 485 aa14.58□□□□□ -0.08
VMP1-207ENST00000588131 PLIN1O60240 522 aa14.57□□□□□ -0.08
VMP1-207ENST00000588131 KCNA4P22459 653 aa14.57□□□□□ -0.08
VMP1-207ENST00000588131 IRX6P78412 446 aaPredicted RBP14.57□□□□□ -0.08
VMP1-207ENST00000588131 ZNF772Q68DY9 489 aaPredicted RBP14.57□□□□□ -0.08
VMP1-207ENST00000588131 SSH1Q8WYL5 1049 aa14.57□□□□□ -0.08
VMP1-207ENST00000588131 UBR2Q8IWV8 1755 aa14.57□□□□□ -0.08
VMP1-207ENST00000588131 C5P01031 1676 aa14.56□□□□□ -0.08
VMP1-207ENST00000588131 TCERG1O14776 1098 aaKnown RBP14.56□□□□□ -0.08
VMP1-207ENST00000588131 ZNF790Q6PG37 636 aa14.56□□□□□ -0.08
VMP1-207ENST00000588131 HEG1Q9ULI3 1381 aa14.56□□□□□ -0.08
VMP1-207ENST00000588131 ALDH1L2Q3SY69 923 aa14.55□□□□□ -0.08
VMP1-207ENST00000588131 SEPT12Q8IYM1 358 aa14.55□□□□□ -0.08
VMP1-207ENST00000588131 ZNF428Q96B54 188 aa14.55□□□□□ -0.08
VMP1-207ENST00000588131 SMC4Q9NTJ3 1288 aa14.55□□□□□ -0.08
VMP1-207ENST00000588131 TMOD3Q9NYL9 352 aa14.55□□□□□ -0.08
VMP1-207ENST00000588131 GTF3C3Q9Y5Q9 886 aa14.55□□□□□ -0.08
VMP1-207ENST00000588131 BCL9O00512 1426 aa14.55□□□□□ -0.08
VMP1-207ENST00000588131 KCPQ6ZWJ8 1503 aa14.55□□□□□ -0.08
VMP1-207ENST00000588131 BRWD3Q6RI45 1802 aa14.55□□□□□ -0.08
VMP1-207ENST00000588131 MRPL50Q8N5N7 158 aaKnown RBP14.54□□□□□ -0.08
VMP1-207ENST00000588131 PIGBQ92521 554 aa14.54□□□□□ -0.08
VMP1-207ENST00000588131 ACSBG1Q96GR2 724 aa14.54□□□□□ -0.08
VMP1-207ENST00000588131 RGS17Q9UGC6 210 aaPredicted RBP14.54□□□□□ -0.08
VMP1-207ENST00000588131 SOS1Q07889 1333 aaPredicted RBP14.53□□□□□ -0.08
VMP1-207ENST00000588131 PRAMEF22A3QJZ6 481 aa14.53□□□□□ -0.08
VMP1-207ENST00000588131 PRIM1P49642 420 aaKnown RBP14.53□□□□□ -0.08
VMP1-207ENST00000588131 TTC5Q8N0Z6 440 aa14.53□□□□□ -0.08
VMP1-207ENST00000588131 ZNF496Q96IT1 587 aaPredicted RBP14.53□□□□□ -0.08
VMP1-207ENST00000588131 GIGYF1O75420 1035 aaPredicted RBP14.52□□□□□ -0.09
VMP1-207ENST00000588131 NEFLP07196 543 aa14.52□□□□□ -0.09
VMP1-207ENST00000588131 RBM6P78332 1123 aaKnown RBP14.52□□□□□ -0.09
VMP1-207ENST00000588131 FKBP8Q14318 412 aa14.52□□□□□ -0.09
VMP1-207ENST00000588131 FAM182BQ5T319 152 aa14.52□□□□□ -0.09
VMP1-207ENST00000588131 FRAT1Q92837 279 aaPredicted RBP14.52□□□□□ -0.09
VMP1-207ENST00000588131 SYTL4Q96C24 671 aaPredicted RBP14.52□□□□□ -0.09
VMP1-207ENST00000588131 HOXB7P09629 217 aa14.51□□□□□ -0.09
VMP1-207ENST00000588131 C20orf194Q5TEA3 1177 aa14.51□□□□□ -0.09
VMP1-207ENST00000588131 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.51□□□□□ -0.09
VMP1-207ENST00000588131 NECTIN2Q92692 538 aa14.51□□□□□ -0.09
VMP1-207ENST00000588131 FMNL2Q96PY5 1086 aa14.51□□□□□ -0.09
VMP1-207ENST00000588131 ATG3Q9NT62 314 aa14.51□□□□□ -0.09
VMP1-207ENST00000588131 ASAP1Q9ULH1 1129 aa14.51□□□□□ -0.09
VMP1-207ENST00000588131 TNNQ9UQP3 1299 aa14.51□□□□□ -0.09
VMP1-207ENST00000588131 LAMB4A4D0S4 1761 aa14.51□□□□□ -0.09
VMP1-207ENST00000588131 NHSQ6T4R5 1651 aa14.51□□□□□ -0.09
VMP1-207ENST00000588131 BRPF1P55201 1214 aaPredicted RBP14.5□□□□□ -0.09
VMP1-207ENST00000588131 C1QBPQ07021 282 aaKnown RBP14.5□□□□□ -0.09
VMP1-207ENST00000588131 HDGFL1Q5TGJ6 251 aa14.5□□□□□ -0.09
VMP1-207ENST00000588131 NOB1Q9ULX3 412 aaKnown RBP14.5□□□□□ -0.09
VMP1-207ENST00000588131 KCNQ2O43526 872 aa14.49□□□□□ -0.09
VMP1-207ENST00000588131 EIF2S2P20042 333 aaKnown RBP14.49□□□□□ -0.09
VMP1-207ENST00000588131 CANXP27824 592 aaKnown RBP14.49□□□□□ -0.09
VMP1-207ENST00000588131 POTEAQ6S8J7 498 aa14.49□□□□□ -0.09
VMP1-207ENST00000588131 SBF2Q86WG5 1849 aa14.49□□□□□ -0.09
VMP1-207ENST00000588131 KIF16BQ96L93 1317 aa14.48□□□□□ -0.09
VMP1-207ENST00000588131 PTCD1O75127 700 aaKnown RBP14.48□□□□□ -0.09
VMP1-207ENST00000588131 CCDC30Q5VVM6 783 aa14.48□□□□□ -0.09
VMP1-207ENST00000588131 ZKSCAN2Q63HK3 967 aa14.48□□□□□ -0.09
VMP1-207ENST00000588131 RGS12O14924 1447 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms