RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 ST18O60284 1047 aa24.38■■□□□ 1.49
MBD1-216ENST00000587605 XRCC6P12956 609 aaKnown RBP eCLIP24.37■■□□□ 1.492e-6■■■■■ 29.9
MBD1-216ENST00000587605 PDE1AP54750 535 aa24.37■■□□□ 1.49
MBD1-216ENST00000587605 NUCB2P80303 420 aa24.37■■□□□ 1.49
MBD1-216ENST00000587605 GZF1Q9H116 711 aaPredicted RBP24.37■■□□□ 1.49
MBD1-216ENST00000587605 CWC22Q9HCG8 908 aaKnown RBP24.37■■□□□ 1.49
MBD1-216ENST00000587605 KCNA6P17658 529 aa24.37■■□□□ 1.49
MBD1-216ENST00000587605 FKBP5Q13451 457 aaPredicted RBP24.37■■□□□ 1.49
MBD1-216ENST00000587605 ATP8B2P98198 1209 aa24.36■■□□□ 1.49
MBD1-216ENST00000587605 ABTB2Q8N961 1025 aa24.35■■□□□ 1.49
MBD1-216ENST00000587605 LRRCC1Q9C099 1032 aa24.35■■□□□ 1.49
MBD1-216ENST00000587605 TUBGCP6Q96RT7 1819 aa24.35■■□□□ 1.49
MBD1-216ENST00000587605 SRCIN1Q9C0H9 1055 aa24.35■■□□□ 1.49
MBD1-216ENST00000587605 APBB1O00213 710 aa24.34■■□□□ 1.49
MBD1-216ENST00000587605 AOX1Q06278 1338 aa24.34■■□□□ 1.49
MBD1-216ENST00000587605 SALL3Q9BXA9 1300 aa24.34■■□□□ 1.49
MBD1-216ENST00000587605 LTN1O94822 1766 aa24.34■■□□□ 1.49
MBD1-216ENST00000587605 IL17REQ8NFR9 667 aa24.33■■□□□ 1.49
MBD1-216ENST00000587605 IBTKQ9P2D0 1353 aaPredicted RBP24.33■■□□□ 1.49
MBD1-216ENST00000587605 CHD2O14647 1828 aaKnown RBP24.33■■□□□ 1.48
MBD1-216ENST00000587605 HOXB7P09629 217 aa24.32■■□□□ 1.48
MBD1-216ENST00000587605 MED1Q15648 1581 aaPredicted RBP24.32■■□□□ 1.48
MBD1-216ENST00000587605 PHRF1Q9P1Y6 1649 aaKnown RBP24.32■■□□□ 1.48
MBD1-216ENST00000587605 CEMIPQ8WUJ3 1361 aa24.31■■□□□ 1.48
MBD1-216ENST00000587605 IP6K1Q92551 441 aa24.31■■□□□ 1.48
MBD1-216ENST00000587605 STAP2Q9UGK3 403 aa24.31■■□□□ 1.48
MBD1-216ENST00000587605 PHF8Q9UPP1 1060 aa24.31■■□□□ 1.48
MBD1-216ENST00000587605 ADGRL3Q9HAR2 1447 aa24.3■■□□□ 1.48
MBD1-216ENST00000587605 GRPEL1Q9HAV7 217 aa24.3■■□□□ 1.48
MBD1-216ENST00000587605 FOXD4L1Q9NU39 408 aa24.3■■□□□ 1.48
MBD1-216ENST00000587605 NFAT5O94916 1531 aa24.3■■□□□ 1.48
MBD1-216ENST00000587605 MX1P20591 662 aa24.29■■□□□ 1.48
MBD1-216ENST00000587605 SSFA2P28290 1259 aa24.29■■□□□ 1.48
MBD1-216ENST00000587605 MCM2P49736 904 aa24.29■■□□□ 1.48
MBD1-216ENST00000587605 EPB41L2O43491 1005 aaKnown RBP24.29■■□□□ 1.48
MBD1-216ENST00000587605 MCCP23508 829 aa24.28■■□□□ 1.48
MBD1-216ENST00000587605 EXOC6BQ9Y2D4 811 aa24.28■■□□□ 1.48
MBD1-216ENST00000587605 BAG4O95429 457 aaKnown RBP24.27■■□□□ 1.48
MBD1-216ENST00000587605 KDM3BQ7LBC6 1761 aa24.27■■□□□ 1.48
MBD1-216ENST00000587605 RAB11FIP3O75154 756 aa24.27■■□□□ 1.48
MBD1-216ENST00000587605 CYP2E1P05181 493 aaPredicted RBP24.27■■□□□ 1.48
MBD1-216ENST00000587605 UBTFL1P0CB47 393 aaPredicted RBP24.27■■□□□ 1.48
MBD1-216ENST00000587605 HDGFL1Q5TGJ6 251 aa24.27■■□□□ 1.48
MBD1-216ENST00000587605 ANAPC15P60006 121 aa24.26■■□□□ 1.47
MBD1-216ENST00000587605 KLHL40Q2TBA0 621 aa24.26■■□□□ 1.47
MBD1-216ENST00000587605 NUTM2GQ5VZR2 741 aa24.26■■□□□ 1.47
MBD1-216ENST00000587605 KCNH5Q8NCM2 988 aa24.26■■□□□ 1.47
MBD1-216ENST00000587605 ZNF142P52746 1687 aaPredicted RBP24.26■■□□□ 1.47
MBD1-216ENST00000587605 LMO7Q8WWI1 1683 aa24.26■■□□□ 1.47
MBD1-216ENST00000587605 ESYT1Q9BSJ8 1104 aa24.25■■□□□ 1.47
MBD1-216ENST00000587605 LRRFIP2Q9Y608 721 aaKnown RBP24.25■■□□□ 1.47
MBD1-216ENST00000587605 PNMA6EA0A0J9YXQ4 647 aa24.24■■□□□ 1.47
MBD1-216ENST00000587605 SSH3Q8TE77 659 aa24.24■■□□□ 1.47
MBD1-216ENST00000587605 IL17RAQ96F46 866 aa24.24■■□□□ 1.47
MBD1-216ENST00000587605 LTV1Q96GA3 475 aaPredicted RBP24.24■■□□□ 1.47
MBD1-216ENST00000587605 USP44Q9H0E7 712 aa24.24■■□□□ 1.47
MBD1-216ENST00000587605 OVOS2A0A0G2JMS6 1433 aa24.23■■□□□ 1.47
MBD1-216ENST00000587605 ANKLE2Q86XL3 938 aa24.22■■□□□ 1.47
MBD1-216ENST00000587605 NCAPD2Q15021 1401 aa24.22■■□□□ 1.47
MBD1-216ENST00000587605 C14orf37Q86TY3 774 aa24.21■■□□□ 1.47
MBD1-216ENST00000587605 CHMLP26374 656 aa24.2■■□□□ 1.46
MBD1-216ENST00000587605 NECTIN2Q92692 538 aa24.2■■□□□ 1.46
MBD1-216ENST00000587605 PANK2Q9BZ23 570 aa24.2■■□□□ 1.46
MBD1-216ENST00000587605 EIF4A1P60842 406 aaKnown RBP24.2■■□□□ 1.46
MBD1-216ENST00000587605 POLA2Q14181 598 aa24.2■■□□□ 1.46
MBD1-216ENST00000587605 ARXQ96QS3 562 aa24.2■■□□□ 1.46
MBD1-216ENST00000587605 AKAP4Q5JQC9 854 aa24.18■■□□□ 1.46
MBD1-216ENST00000587605 DDX49Q9Y6V7 483 aaKnown RBP24.18■■□□□ 1.46
MBD1-216ENST00000587605 AMOTQ4VCS5 1084 aa24.18■■□□□ 1.46
MBD1-216ENST00000587605 PLEKHO1Q53GL0 409 aaPredicted RBP24.18■■□□□ 1.46
MBD1-216ENST00000587605 HSP90AB4PQ58FF6 505 aa24.18■■□□□ 1.46
MBD1-216ENST00000587605 TRIM6-TRIM34B2RNG4 842 aa24.16■■□□□ 1.46
MBD1-216ENST00000587605 PSME1Q06323 249 aa24.16■■□□□ 1.46
MBD1-216ENST00000587605 USHBP1Q8N6Y0 703 aa24.16■■□□□ 1.46
MBD1-216ENST00000587605 LMTK3Q96Q04 1460 aa24.16■■□□□ 1.46
MBD1-216ENST00000587605 NBPF6Q5VWK0 638 aa24.16■■□□□ 1.46
MBD1-216ENST00000587605 NBPF4Q96M43 638 aa24.16■■□□□ 1.46
MBD1-216ENST00000587605 SLIT3O75094 1523 aa24.15■■□□□ 1.46
MBD1-216ENST00000587605 NEK4P51957 841 aa24.15■■□□□ 1.46
MBD1-216ENST00000587605 RILPL2Q969X0 211 aa24.15■■□□□ 1.46
MBD1-216ENST00000587605 KIF1BPQ96EK5 621 aa24.15■■□□□ 1.46
MBD1-216ENST00000587605 PHAXQ9H814 394 aaKnown RBP24.15■■□□□ 1.46
MBD1-216ENST00000587605 HDAC5Q9UQL6 1122 aa24.15■■□□□ 1.46
MBD1-216ENST00000587605 AK9Q5TCS8 1911 aa24.15■■□□□ 1.46
MBD1-216ENST00000587605 TEFQ10587 303 aa24.14■■□□□ 1.46
MBD1-216ENST00000587605 CUL4AQ13619 759 aa24.14■■□□□ 1.46
MBD1-216ENST00000587605 MCTP1Q6DN14 999 aa24.14■■□□□ 1.46
MBD1-216ENST00000587605 DNAAF4Q8WXU2 420 aa24.14■■□□□ 1.46
MBD1-216ENST00000587605 INTS4Q96HW7 963 aaKnown RBP24.14■■□□□ 1.46
MBD1-216ENST00000587605 RRAGDQ9NQL2 400 aaPredicted RBP24.14■■□□□ 1.46
MBD1-216ENST00000587605 PPP1R42Q7Z4L9 355 aa24.14■■□□□ 1.45
MBD1-216ENST00000587605 ZNF445P59923 1031 aa24.13■■□□□ 1.45
MBD1-216ENST00000587605 GAS2L3Q86XJ1 694 aa24.13■■□□□ 1.45
MBD1-216ENST00000587605 CAMTA1Q9Y6Y1 1673 aa24.12■■□□□ 1.45
MBD1-216ENST00000587605 BEND3Q5T5X7 828 aa24.12■■□□□ 1.45
MBD1-216ENST00000587605 TMX3Q96JJ7 454 aa24.12■■□□□ 1.45
MBD1-216ENST00000587605 ANO2Q9NQ90 1003 aa24.12■■□□□ 1.45
MBD1-216ENST00000587605 LMBRD1Q9NUN5 540 aa24.12■■□□□ 1.45
MBD1-216ENST00000587605 TSHZ3Q63HK5 1081 aa24.12■■□□□ 1.45
MBD1-216ENST00000587605 ZNF530Q6P9A1 599 aaPredicted RBP24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms