RNA–Protein interactions for RNA: ENST00000587376.5

ERCC2-210, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-210ENST00000587376 NPC1L1Q9UHC9 1359 aa20.8■□□□□ 0.92
ERCC2-210ENST00000587376 PHF14O94880 888 aa20.79■□□□□ 0.92
ERCC2-210ENST00000587376 RBM42Q9BTD8 480 aaKnown RBP20.79■□□□□ 0.92
ERCC2-210ENST00000587376 SSFA2P28290 1259 aa20.78■□□□□ 0.92
ERCC2-210ENST00000587376 ATG3Q9NT62 314 aa20.78■□□□□ 0.92
ERCC2-210ENST00000587376 COL24A1Q17RW2 1714 aa20.78■□□□□ 0.92
ERCC2-210ENST00000587376 GPR162Q16538 588 aa20.77■□□□□ 0.92
ERCC2-210ENST00000587376 MSL1Q68DK7 614 aa20.77■□□□□ 0.92
ERCC2-210ENST00000587376 GNPATO15228 680 aa20.76■□□□□ 0.91
ERCC2-210ENST00000587376 HMOX1P09601 288 aa20.76■□□□□ 0.91
ERCC2-210ENST00000587376 AKAP4Q5JQC9 854 aa20.76■□□□□ 0.91
ERCC2-210ENST00000587376 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.75■□□□□ 0.91
ERCC2-210ENST00000587376 LINC00116Q8NCU8 138 aa20.75■□□□□ 0.91
ERCC2-210ENST00000587376 CFAP53Q96M91 514 aa20.75■□□□□ 0.91
ERCC2-210ENST00000587376 KDM6AO15550 1401 aaPredicted RBP20.74■□□□□ 0.91
ERCC2-210ENST00000587376 PELP1Q8IZL8 1130 aaKnown RBP20.74■□□□□ 0.91
ERCC2-210ENST00000587376 UBR3Q6ZT12 1888 aa20.73■□□□□ 0.91
ERCC2-210ENST00000587376 U2SURPO15042 1029 aaKnown RBP20.73■□□□□ 0.91
ERCC2-210ENST00000587376 ITPK1Q13572 414 aa20.73■□□□□ 0.91
ERCC2-210ENST00000587376 NFATC2IPQ8NCF5 419 aa20.73■□□□□ 0.91
ERCC2-210ENST00000587376 RTCBQ9Y3I0 505 aaKnown RBP20.73■□□□□ 0.91
ERCC2-210ENST00000587376 ZNF831Q5JPB2 1677 aa20.71■□□□□ 0.91
ERCC2-210ENST00000587376 PTCD1O75127 700 aaKnown RBP20.7■□□□□ 0.9
ERCC2-210ENST00000587376 TRAPPC3LQ5T215 181 aa20.7■□□□□ 0.9
ERCC2-210ENST00000587376 SCN11AQ9UI33 1791 aa20.69■□□□□ 0.9
ERCC2-210ENST00000587376 RC3H1Q5TC82 1133 aaKnown RBP20.69■□□□□ 0.9
ERCC2-210ENST00000587376 NUDCQ9Y266 331 aa20.68■□□□□ 0.9
ERCC2-210ENST00000587376 CD2APQ9Y5K6 639 aa20.68■□□□□ 0.9
ERCC2-210ENST00000587376 ADRA2BP18089 450 aa20.67■□□□□ 0.9
ERCC2-210ENST00000587376 SLC52A2Q9HAB3 445 aa20.67■□□□□ 0.9
ERCC2-210ENST00000587376 CNTNAP4Q9C0A0 1308 aa20.67■□□□□ 0.9
ERCC2-210ENST00000587376 RFC4P35249 363 aa20.66■□□□□ 0.9
ERCC2-210ENST00000587376 NLGN2Q8NFZ4 835 aa20.66■□□□□ 0.9
ERCC2-210ENST00000587376 CHD4Q14839 1912 aa20.66■□□□□ 0.9
ERCC2-210ENST00000587376 RNMTO43148 476 aaKnown RBP20.65■□□□□ 0.9
ERCC2-210ENST00000587376 GRIN3BO60391 1043 aa20.65■□□□□ 0.9
ERCC2-210ENST00000587376 MTHFSDQ2M296 383 aaKnown RBP20.65■□□□□ 0.9
ERCC2-210ENST00000587376 SMIM5Q71RC9 77 aa20.65■□□□□ 0.9
ERCC2-210ENST00000587376 AMIGO3Q86WK7 504 aa20.65■□□□□ 0.9
ERCC2-210ENST00000587376 GAS2L2Q8NHY3 880 aa20.65■□□□□ 0.9
ERCC2-210ENST00000587376 COL5A3P25940 1745 aaPredicted RBP20.64■□□□□ 0.9
ERCC2-210ENST00000587376 RPS6KA4O75676 772 aa20.64■□□□□ 0.89
ERCC2-210ENST00000587376 NLGN1Q8N2Q7 840 aa20.64■□□□□ 0.89
ERCC2-210ENST00000587376 SLC4A9Q96Q91 983 aa20.64■□□□□ 0.89
ERCC2-210ENST00000587376 LGR6Q9HBX8 967 aa20.63■□□□□ 0.89
ERCC2-210ENST00000587376 COL3A1P02461 1466 aaPredicted RBP20.62■□□□□ 0.89
ERCC2-210ENST00000587376 CRKLP46109 303 aaKnown RBP20.62■□□□□ 0.89
ERCC2-210ENST00000587376 TTC5Q8N0Z6 440 aa20.62■□□□□ 0.89
ERCC2-210ENST00000587376 VIRMAQ69YN4 1812 aaKnown RBP20.62■□□□□ 0.89
ERCC2-210ENST00000587376 GNAT3A8MTJ3 354 aa20.61■□□□□ 0.89
ERCC2-210ENST00000587376 TEFQ10587 303 aa20.61■□□□□ 0.89
ERCC2-210ENST00000587376 ARHGEF1Q92888 912 aaKnown RBP20.61■□□□□ 0.89
ERCC2-210ENST00000587376 MMP10P09238 476 aa20.6■□□□□ 0.89
ERCC2-210ENST00000587376 MRC1P22897 1456 aa20.6■□□□□ 0.89
ERCC2-210ENST00000587376 PPP2R1AP30153 589 aa20.59■□□□□ 0.89
ERCC2-210ENST00000587376 NEFMP07197 916 aa20.58■□□□□ 0.89
ERCC2-210ENST00000587376 U2AF1L5P0DN76 240 aaPredicted RBP20.58■□□□□ 0.89
ERCC2-210ENST00000587376 U2AF1Q01081 240 aaKnown RBP eCLIP20.58■□□□□ 0.89
ERCC2-210ENST00000587376 PARP3Q9Y6F1 533 aa20.58■□□□□ 0.89
ERCC2-210ENST00000587376 CICQ96RK0 1608 aaPredicted RBP20.57■□□□□ 0.88
ERCC2-210ENST00000587376 PRKAR2BP31323 418 aa20.57■□□□□ 0.88
ERCC2-210ENST00000587376 SLC39A6Q13433 755 aa20.57■□□□□ 0.88
ERCC2-210ENST00000587376 CCDC87Q9NVE4 849 aa20.57■□□□□ 0.88
ERCC2-210ENST00000587376 TJP1Q07157 1748 aa20.56■□□□□ 0.88
ERCC2-210ENST00000587376 ADAMTS7Q9UKP4 1686 aa20.55■□□□□ 0.88
ERCC2-210ENST00000587376 ZPR1O75312 459 aa20.55■□□□□ 0.88
ERCC2-210ENST00000587376 GYS1P13807 737 aa20.55■□□□□ 0.88
ERCC2-210ENST00000587376 VSIG10Q8N0Z9 540 aa20.55■□□□□ 0.88
ERCC2-210ENST00000587376 ZNF784Q8NCA9 323 aaPredicted RBP20.55■□□□□ 0.88
ERCC2-210ENST00000587376 RTF1Q92541 710 aaKnown RBP20.55■□□□□ 0.88
ERCC2-210ENST00000587376 UTRNP46939 3433 aa20.55■□□□□ 0.88
ERCC2-210ENST00000587376 MYH14Q7Z406 1995 aaKnown RBP20.54■□□□□ 0.88
ERCC2-210ENST00000587376 YBX3P16989 372 aaKnown RBP eCLIP20.54■□□□□ 0.887e-8■□□□□ 8.2
ERCC2-210ENST00000587376 DNAJC10Q8IXB1 793 aa20.54■□□□□ 0.88
ERCC2-210ENST00000587376 RSPH6AQ9H0K4 717 aa20.54■□□□□ 0.88
ERCC2-210ENST00000587376 C4AP0C0L4 1744 aa20.53■□□□□ 0.88
ERCC2-210ENST00000587376 FCHSD2O94868 740 aa20.53■□□□□ 0.88
ERCC2-210ENST00000587376 STARD3NLO95772 234 aa20.53■□□□□ 0.88
ERCC2-210ENST00000587376 TEX13AQ9BXU3 409 aaPredicted RBP20.52■□□□□ 0.88
ERCC2-210ENST00000587376 CYP19A1P11511 503 aaPredicted RBP20.51■□□□□ 0.87
ERCC2-210ENST00000587376 TGFB2P61812 414 aa20.51■□□□□ 0.87
ERCC2-210ENST00000587376 INTS5Q6P9B9 1019 aaKnown RBP20.51■□□□□ 0.87
ERCC2-210ENST00000587376 NPM2Q86SE8 214 aaKnown RBP20.51■□□□□ 0.87
ERCC2-210ENST00000587376 KCPQ6ZWJ8 1503 aa20.51■□□□□ 0.87
ERCC2-210ENST00000587376 USP42Q9H9J4 1324 aaKnown RBP20.51■□□□□ 0.87
ERCC2-210ENST00000587376 ZNF790Q6PG37 636 aa20.5■□□□□ 0.87
ERCC2-210ENST00000587376 IL17REQ8NFR9 667 aa20.5■□□□□ 0.87
ERCC2-210ENST00000587376 GOLGB1Q14789 3259 aaKnown RBP20.49■□□□□ 0.87
ERCC2-210ENST00000587376 PHACTR3Q96KR7 559 aa20.49■□□□□ 0.87
ERCC2-210ENST00000587376 FMNL2Q96PY5 1086 aa20.49■□□□□ 0.87
ERCC2-210ENST00000587376 SRP68Q9UHB9 627 aaKnown RBP20.49■□□□□ 0.87
ERCC2-210ENST00000587376 UBR2Q8IWV8 1755 aa20.49■□□□□ 0.87
ERCC2-210ENST00000587376 BTBD11A6QL63 1104 aa20.48■□□□□ 0.87
ERCC2-210ENST00000587376 PNNQ9H307 717 aaKnown RBP20.48■□□□□ 0.87
ERCC2-210ENST00000587376 WWC3Q9ULE0 1092 aa20.48■□□□□ 0.87
ERCC2-210ENST00000587376 SOS1Q07889 1333 aaPredicted RBP20.48■□□□□ 0.87
ERCC2-210ENST00000587376 COL15A1P39059 1388 aa20.47■□□□□ 0.87
ERCC2-210ENST00000587376 KIF13BQ9NQT8 1826 aa20.46■□□□□ 0.87
ERCC2-210ENST00000587376 C10orf71Q711Q0 1435 aa20.46■□□□□ 0.87
ERCC2-210ENST00000587376 A0A087WZG4 1122 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms