RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 C10orf71Q711Q0 1435 aa19.68■□□□□ 0.74
CXXC1-208ENST00000587170 PHF14O94880 888 aa19.68■□□□□ 0.74
CXXC1-208ENST00000587170 ADAMTS7Q9UKP4 1686 aa19.68■□□□□ 0.74
CXXC1-208ENST00000587170 SBF1O95248 1867 aa19.67■□□□□ 0.74
CXXC1-208ENST00000587170 HSPA6P17066 643 aa19.67■□□□□ 0.74
CXXC1-208ENST00000587170 ITPK1Q13572 414 aa19.67■□□□□ 0.74
CXXC1-208ENST00000587170 SMIM5Q71RC9 77 aa19.67■□□□□ 0.74
CXXC1-208ENST00000587170 EYA1Q99502 592 aa19.67■□□□□ 0.74
CXXC1-208ENST00000587170 TMOD3Q9NYL9 352 aa19.67■□□□□ 0.74
CXXC1-208ENST00000587170 PHKG2P15735 406 aa19.66■□□□□ 0.74
CXXC1-208ENST00000587170 ASAP1Q9ULH1 1129 aa19.66■□□□□ 0.74
CXXC1-208ENST00000587170 WDR90Q96KV7 1748 aa19.65■□□□□ 0.74
CXXC1-208ENST00000587170 GNPATO15228 680 aa19.65■□□□□ 0.74
CXXC1-208ENST00000587170 IFNL2Q8IZJ0 200 aa19.64■□□□□ 0.73
CXXC1-208ENST00000587170 DLEC1Q9Y238 1755 aa19.63■□□□□ 0.73
CXXC1-208ENST00000587170 TNRC6CQ9HCJ0 1690 aaKnown RBP19.62■□□□□ 0.73
CXXC1-208ENST00000587170 KIF3CO14782 793 aa19.62■□□□□ 0.73
CXXC1-208ENST00000587170 ATP6V1AP38606 617 aa19.62■□□□□ 0.73
CXXC1-208ENST00000587170 ZNF526Q8TF50 670 aaPredicted RBP19.62■□□□□ 0.73
CXXC1-208ENST00000587170 ATG3Q9NT62 314 aa19.62■□□□□ 0.73
CXXC1-208ENST00000587170 POLKQ9UBT6 870 aa19.62■□□□□ 0.73
CXXC1-208ENST00000587170 KDM6AO15550 1401 aaPredicted RBP19.61■□□□□ 0.73
CXXC1-208ENST00000587170 MMP10P09238 476 aa19.61■□□□□ 0.73
CXXC1-208ENST00000587170 AFDNP55196 1824 aaKnown RBP19.6■□□□□ 0.73
CXXC1-208ENST00000587170 PCNTO95613 3336 aa19.6■□□□□ 0.73
CXXC1-208ENST00000587170 PPM1GO15355 546 aaPredicted RBP19.6■□□□□ 0.73
CXXC1-208ENST00000587170 CNTNAP4Q9C0A0 1308 aa19.59■□□□□ 0.73
CXXC1-208ENST00000587170 ADRA2BP18089 450 aa19.59■□□□□ 0.73
CXXC1-208ENST00000587170 TGFB2P61812 414 aa19.59■□□□□ 0.73
CXXC1-208ENST00000587170 EIF4A2Q14240 407 aaKnown RBP19.59■□□□□ 0.73
CXXC1-208ENST00000587170 SLC4A9Q96Q91 983 aa19.59■□□□□ 0.73
CXXC1-208ENST00000587170 ERVV-2B6SEH9 535 aa19.58■□□□□ 0.72
CXXC1-208ENST00000587170 RC3H1Q5TC82 1133 aaKnown RBP19.58■□□□□ 0.72
CXXC1-208ENST00000587170 WWC3Q9ULE0 1092 aa19.58■□□□□ 0.72
CXXC1-208ENST00000587170 NRXN2Q9P2S2 1712 aa19.58■□□□□ 0.72
CXXC1-208ENST00000587170 NLGN1Q8N2Q7 840 aa19.56■□□□□ 0.72
CXXC1-208ENST00000587170 RTCBQ9Y3I0 505 aaKnown RBP19.56■□□□□ 0.72
CXXC1-208ENST00000587170 CCDC88AQ3V6T2 1871 aa19.55■□□□□ 0.72
CXXC1-208ENST00000587170 DCAF5Q96JK2 942 aa19.55■□□□□ 0.72
CXXC1-208ENST00000587170 UBR2Q8IWV8 1755 aa19.55■□□□□ 0.72
CXXC1-208ENST00000587170 HSP90AB1P08238 724 aaKnown RBP19.54■□□□□ 0.72
CXXC1-208ENST00000587170 GYS1P13807 737 aa19.54■□□□□ 0.72
CXXC1-208ENST00000587170 TRAPPC3LQ5T215 181 aa19.54■□□□□ 0.72
CXXC1-208ENST00000587170 ARHGEF1Q92888 912 aaKnown RBP19.53■□□□□ 0.72
CXXC1-208ENST00000587170 TIMELESSQ9UNS1 1208 aa19.53■□□□□ 0.72
CXXC1-208ENST00000587170 TIAM2Q8IVF5 1701 aa19.52■□□□□ 0.72
CXXC1-208ENST00000587170 RPS6KA4O75676 772 aa19.52■□□□□ 0.72
CXXC1-208ENST00000587170 MRC1P22897 1456 aa19.52■□□□□ 0.72
CXXC1-208ENST00000587170 TOMM70O94826 608 aa19.51■□□□□ 0.71
CXXC1-208ENST00000587170 APLP1P51693 650 aa19.51■□□□□ 0.71
CXXC1-208ENST00000587170 CCDC87Q9NVE4 849 aa19.51■□□□□ 0.71
CXXC1-208ENST00000587170 BCS1LQ9Y276 419 aa19.51■□□□□ 0.71
CXXC1-208ENST00000587170 A0A0G2JLW4 131 aa19.5■□□□□ 0.71
CXXC1-208ENST00000587170 DPEP1P16444 411 aa19.49■□□□□ 0.71
CXXC1-208ENST00000587170 AMOTQ4VCS5 1084 aa19.49■□□□□ 0.71
CXXC1-208ENST00000587170 DICER1Q9UPY3 1922 aaKnown RBP19.49■□□□□ 0.71
CXXC1-208ENST00000587170 KCNA3P22001 575 aa19.48■□□□□ 0.71
CXXC1-208ENST00000587170 RFC4P35249 363 aa19.48■□□□□ 0.71
CXXC1-208ENST00000587170 RBM42Q9BTD8 480 aaKnown RBP19.48■□□□□ 0.71
CXXC1-208ENST00000587170 PLEKHO1Q53GL0 409 aaPredicted RBP19.47■□□□□ 0.71
CXXC1-208ENST00000587170 ZNF530Q6P9A1 599 aaPredicted RBP19.47■□□□□ 0.71
CXXC1-208ENST00000587170 DNAJC5GQ8N7S2 189 aa19.47■□□□□ 0.71
CXXC1-208ENST00000587170 PARP3Q9Y6F1 533 aa19.47■□□□□ 0.71
CXXC1-208ENST00000587170 USP42Q9H9J4 1324 aaKnown RBP19.47■□□□□ 0.71
CXXC1-208ENST00000587170 TNNT2P45379 298 aaPredicted RBP19.46■□□□□ 0.71
CXXC1-208ENST00000587170 SIPA1L3O60292 1781 aaPredicted RBP19.46■□□□□ 0.71
CXXC1-208ENST00000587170 FCHSD2O94868 740 aa19.45■□□□□ 0.7
CXXC1-208ENST00000587170 CRKLP46109 303 aaKnown RBP19.45■□□□□ 0.7
CXXC1-208ENST00000587170 CABP4P57796 275 aa19.45■□□□□ 0.7
CXXC1-208ENST00000587170 ARHGAP27Q6ZUM4 889 aa19.45■□□□□ 0.7
CXXC1-208ENST00000587170 NMRK2Q9NPI5 230 aa19.45■□□□□ 0.7
CXXC1-208ENST00000587170 ANKRD31Q8N7Z5 1873 aa19.45■□□□□ 0.7
CXXC1-208ENST00000587170 CLSPNQ9HAW4 1339 aa19.45■□□□□ 0.7
CXXC1-208ENST00000587170 KCPQ6ZWJ8 1503 aa19.45■□□□□ 0.7
CXXC1-208ENST00000587170 SCN7AQ01118 1682 aa19.44■□□□□ 0.7
CXXC1-208ENST00000587170 DDR1Q08345 913 aa19.43■□□□□ 0.7
CXXC1-208ENST00000587170 AEBP1Q8IUX7 1158 aa19.43■□□□□ 0.7
CXXC1-208ENST00000587170 RBM46Q8TBY0 533 aaKnown RBP19.43■□□□□ 0.7
CXXC1-208ENST00000587170 C9orf131Q5VYM1 1079 aa19.42■□□□□ 0.7
CXXC1-208ENST00000587170 PIM2Q9P1W9 311 aa19.42■□□□□ 0.7
CXXC1-208ENST00000587170 ARFGEF2Q9Y6D5 1785 aa19.42■□□□□ 0.7
CXXC1-208ENST00000587170 FER1L6Q2WGJ9 1857 aa19.41■□□□□ 0.7
CXXC1-208ENST00000587170 PTCD1O75127 700 aaKnown RBP19.41■□□□□ 0.7
CXXC1-208ENST00000587170 MTHFSP49914 203 aa19.41■□□□□ 0.7
CXXC1-208ENST00000587170 FKBP8Q14318 412 aa19.41■□□□□ 0.7
CXXC1-208ENST00000587170 SRP68Q9UHB9 627 aaKnown RBP19.41■□□□□ 0.7
CXXC1-208ENST00000587170 COL11A2P13942 1736 aaPredicted RBP19.41■□□□□ 0.7
CXXC1-208ENST00000587170 TRIM26Q12899 539 aaPredicted RBP19.4■□□□□ 0.7
CXXC1-208ENST00000587170 C1orf141Q5JVX7 400 aa19.4■□□□□ 0.7
CXXC1-208ENST00000587170 NFATC2IPQ8NCF5 419 aa19.4■□□□□ 0.7
CXXC1-208ENST00000587170 CACNA1SQ13698 1873 aa19.39■□□□□ 0.7
CXXC1-208ENST00000587170 DALRD3Q5D0E6 543 aaKnown RBP19.39■□□□□ 0.69
CXXC1-208ENST00000587170 INTS5Q6P9B9 1019 aaKnown RBP19.39■□□□□ 0.69
CXXC1-208ENST00000587170 PANK3Q9H999 370 aa19.39■□□□□ 0.69
CXXC1-208ENST00000587170 POLRMTO00411 1230 aaKnown RBP19.38■□□□□ 0.69
CXXC1-208ENST00000587170 TM4SF1P30408 202 aa19.38■□□□□ 0.69
CXXC1-208ENST00000587170 FSTL1Q12841 308 aa19.38■□□□□ 0.69
CXXC1-208ENST00000587170 KDM2BQ8NHM5 1336 aa19.38■□□□□ 0.69
CXXC1-208ENST00000587170 ZC3H4Q9UPT8 1303 aaKnown RBP19.38■□□□□ 0.69
CXXC1-208ENST00000587170 BCORQ6W2J9 1755 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms