RNA–Protein interactions for RNA: ENST00000586718.1

NPC1-204, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-204ENST00000586718 AFF2P51816 1311 aa10.96□□□□□ -0.65
NPC1-204ENST00000586718 BTBD11A6QL63 1104 aa10.96□□□□□ -0.65
NPC1-204ENST00000586718 RARSP54136 660 aaKnown RBP10.96□□□□□ -0.65
NPC1-204ENST00000586718 ALDH1L2Q3SY69 923 aa10.96□□□□□ -0.65
NPC1-204ENST00000586718 ERICH6BQ5W0A0 696 aa10.96□□□□□ -0.65
NPC1-204ENST00000586718 BARGINQ6ZT62 677 aa10.96□□□□□ -0.65
NPC1-204ENST00000586718 UBR2Q8IWV8 1755 aa10.95□□□□□ -0.66
NPC1-204ENST00000586718 GLI3P10071 1580 aa10.95□□□□□ -0.66
NPC1-204ENST00000586718 ATRNO75882 1429 aa10.95□□□□□ -0.66
NPC1-204ENST00000586718 EXOC5O00471 708 aa10.95□□□□□ -0.66
NPC1-204ENST00000586718 MS4A1P11836 297 aa10.95□□□□□ -0.66
NPC1-204ENST00000586718 DDB1Q16531 1140 aa10.95□□□□□ -0.66
NPC1-204ENST00000586718 DDX54Q8TDD1 881 aaKnown RBP10.95□□□□□ -0.66
NPC1-204ENST00000586718 SLC52A2Q9HAB3 445 aa10.95□□□□□ -0.66
NPC1-204ENST00000586718 LGR6Q9HBX8 967 aa10.95□□□□□ -0.66
NPC1-204ENST00000586718 CACNA1FO60840 1977 aa10.95□□□□□ -0.66
NPC1-204ENST00000586718 ITGB4P16144 1822 aa10.95□□□□□ -0.66
NPC1-204ENST00000586718 A0A0G2JS52 829 aa10.94□□□□□ -0.66
NPC1-204ENST00000586718 CABP4P57796 275 aa10.94□□□□□ -0.66
NPC1-204ENST00000586718 MYT1Q01538 1121 aa10.94□□□□□ -0.66
NPC1-204ENST00000586718 NKX1-1Q15270 411 aaPredicted RBP10.94□□□□□ -0.66
NPC1-204ENST00000586718 TTC5Q8N0Z6 440 aa10.94□□□□□ -0.66
NPC1-204ENST00000586718 C5P01031 1676 aa10.93□□□□□ -0.66
NPC1-204ENST00000586718 ERVV-2B6SEH9 535 aa10.93□□□□□ -0.66
NPC1-204ENST00000586718 HOXB7P09629 217 aa10.93□□□□□ -0.66
NPC1-204ENST00000586718 IRX6P78412 446 aaPredicted RBP10.93□□□□□ -0.66
NPC1-204ENST00000586718 FRAT1Q92837 279 aaPredicted RBP10.93□□□□□ -0.66
NPC1-204ENST00000586718 BCL2L13Q9BXK5 485 aa10.93□□□□□ -0.66
NPC1-204ENST00000586718 MIS18AQ9NYP9 233 aa10.93□□□□□ -0.66
NPC1-204ENST00000586718 TRPC5Q9UL62 973 aaPredicted RBP10.93□□□□□ -0.66
NPC1-204ENST00000586718 ELL2O00472 640 aaPredicted RBP10.92□□□□□ -0.66
NPC1-204ENST00000586718 IPO8O15397 1037 aaKnown RBP10.92□□□□□ -0.66
NPC1-204ENST00000586718 BCAR3O75815 825 aa10.92□□□□□ -0.66
NPC1-204ENST00000586718 FAM98CQ17RN3 349 aaKnown RBP10.92□□□□□ -0.66
NPC1-204ENST00000586718 ZKSCAN2Q63HK3 967 aa10.92□□□□□ -0.66
NPC1-204ENST00000586718 FTSJ3Q8IY81 847 aaKnown RBP10.92□□□□□ -0.66
NPC1-204ENST00000586718 C8orf58Q8NAV2 365 aa10.92□□□□□ -0.66
NPC1-204ENST00000586718 FBXO41Q8TF61 875 aa10.92□□□□□ -0.66
NPC1-204ENST00000586718 SSH1Q8WYL5 1049 aa10.92□□□□□ -0.66
NPC1-204ENST00000586718 STK31Q9BXU1 1019 aa10.92□□□□□ -0.66
NPC1-204ENST00000586718 TMOD3Q9NYL9 352 aa10.92□□□□□ -0.66
NPC1-204ENST00000586718 VAMP4O75379 141 aa10.91□□□□□ -0.66
NPC1-204ENST00000586718 N4BP2Q86UW6 1770 aaPredicted RBP10.9□□□□□ -0.66
NPC1-204ENST00000586718 NHSQ6T4R5 1651 aa10.9□□□□□ -0.66
NPC1-204ENST00000586718 EIF4A1P60842 406 aaKnown RBP10.9□□□□□ -0.66
NPC1-204ENST00000586718 PDE3AQ14432 1141 aa10.9□□□□□ -0.66
NPC1-204ENST00000586718 HDGFL1Q5TGJ6 251 aa10.9□□□□□ -0.66
NPC1-204ENST00000586718 CCDC30Q5VVM6 783 aa10.9□□□□□ -0.66
NPC1-204ENST00000586718 ZNF790Q6PG37 636 aa10.9□□□□□ -0.66
NPC1-204ENST00000586718 TSPYL6Q8N831 410 aa10.9□□□□□ -0.66
NPC1-204ENST00000586718 KCPQ6ZWJ8 1503 aa10.89□□□□□ -0.67
NPC1-204ENST00000586718 PLIN1O60240 522 aa10.89□□□□□ -0.67
NPC1-204ENST00000586718 BRPF1P55201 1214 aaPredicted RBP10.89□□□□□ -0.67
NPC1-204ENST00000586718 KRT24Q2M2I5 525 aa10.89□□□□□ -0.67
NPC1-204ENST00000586718 ZNF772Q68DY9 489 aaPredicted RBP10.89□□□□□ -0.67
NPC1-204ENST00000586718 NFATC2IPQ8NCF5 419 aa10.89□□□□□ -0.67
NPC1-204ENST00000586718 GJD4Q96KN9 370 aaPredicted RBP10.89□□□□□ -0.67
NPC1-204ENST00000586718 FMNL2Q96PY5 1086 aa10.89□□□□□ -0.67
NPC1-204ENST00000586718 API5Q9BZZ5 524 aaKnown RBP10.89□□□□□ -0.67
NPC1-204ENST00000586718 ATF7IPQ6VMQ6 1270 aa10.88□□□□□ -0.67
NPC1-204ENST00000586718 MRPL50Q8N5N7 158 aaKnown RBP10.88□□□□□ -0.67
NPC1-204ENST00000586718 PTPRCP08575 1304 aa10.87□□□□□ -0.67
NPC1-204ENST00000586718 BCL9O00512 1426 aa10.87□□□□□ -0.67
NPC1-204ENST00000586718 CICQ96RK0 1608 aaPredicted RBP10.87□□□□□ -0.67
NPC1-204ENST00000586718 PXDNLA1KZ92 1463 aa10.87□□□□□ -0.67
NPC1-204ENST00000586718 KAT6BQ8WYB5 2073 aa10.86□□□□□ -0.67
NPC1-204ENST00000586718 KCNQ3O43525 872 aa10.86□□□□□ -0.67
NPC1-204ENST00000586718 SLC39A6Q13433 755 aa10.86□□□□□ -0.67
NPC1-204ENST00000586718 DZIP1LQ8IYY4 767 aaKnown RBP10.86□□□□□ -0.67
NPC1-204ENST00000586718 ARHGAP45Q92619 1136 aa10.86□□□□□ -0.67
NPC1-204ENST00000586718 SYTL4Q96C24 671 aaPredicted RBP10.86□□□□□ -0.67
NPC1-204ENST00000586718 CRBNQ96SW2 442 aa10.86□□□□□ -0.67
NPC1-204ENST00000586718 PPP4R2Q9NY27 417 aa10.86□□□□□ -0.67
NPC1-204ENST00000586718 NOB1Q9ULX3 412 aaKnown RBP10.86□□□□□ -0.67
NPC1-204ENST00000586718 HEG1Q9ULI3 1381 aa10.86□□□□□ -0.67
NPC1-204ENST00000586718 TCERG1O14776 1098 aaKnown RBP10.85□□□□□ -0.67
NPC1-204ENST00000586718 GIGYF1O75420 1035 aaPredicted RBP10.85□□□□□ -0.67
NPC1-204ENST00000586718 SNRPA1P09661 255 aaKnown RBP10.85□□□□□ -0.67
NPC1-204ENST00000586718 TRIM27P14373 513 aa10.85□□□□□ -0.67
NPC1-204ENST00000586718 EIF2S2P20042 333 aaKnown RBP10.85□□□□□ -0.67
NPC1-204ENST00000586718 MARCH10Q8NA82 808 aaPredicted RBP10.85□□□□□ -0.67
NPC1-204ENST00000586718 CHMP4BQ9H444 224 aaKnown RBP10.85□□□□□ -0.67
NPC1-204ENST00000586718 QTRT2Q9H974 415 aaKnown RBP10.85□□□□□ -0.67
NPC1-204ENST00000586718 ERBB4Q15303 1308 aa10.84□□□□□ -0.67
NPC1-204ENST00000586718 TJP1Q07157 1748 aa10.84□□□□□ -0.67
NPC1-204ENST00000586718 BTAF1O14981 1849 aa10.84□□□□□ -0.67
NPC1-204ENST00000586718 BRWD3Q6RI45 1802 aa10.84□□□□□ -0.67
NPC1-204ENST00000586718 SLC4A2P04920 1241 aa10.84□□□□□ -0.67
NPC1-204ENST00000586718 AAMPQ13685 434 aa10.84□□□□□ -0.67
NPC1-204ENST00000586718 C20orf194Q5TEA3 1177 aa10.84□□□□□ -0.67
NPC1-204ENST00000586718 ITPRIPQ8IWB1 547 aa10.84□□□□□ -0.67
NPC1-204ENST00000586718 EXOC6Q8TAG9 804 aa10.84□□□□□ -0.67
NPC1-204ENST00000586718 PANK1Q8TE04 598 aa10.84□□□□□ -0.67
NPC1-204ENST00000586718 NECTIN2Q92692 538 aa10.84□□□□□ -0.67
NPC1-204ENST00000586718 ZNF496Q96IT1 587 aaPredicted RBP10.84□□□□□ -0.67
NPC1-204ENST00000586718 DBF4Q9UBU7 674 aaPredicted RBP10.84□□□□□ -0.67
NPC1-204ENST00000586718 SBF2Q86WG5 1849 aa10.84□□□□□ -0.67
NPC1-204ENST00000586718 ABCC4O15439 1325 aa10.84□□□□□ -0.67
NPC1-204ENST00000586718 ZNF831Q5JPB2 1677 aa10.83□□□□□ -0.68
NPC1-204ENST00000586718 FLIIQ13045 1269 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms