RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-208	ENST00000586548	SPG7	Q9UQ90	795 aa		28.15	■■■□□ 2.1
CIRBP-208	ENST00000586548	EIF4A1	P60842	406 aa	Known RBP	28.14	■■■□□ 2.1
CIRBP-208	ENST00000586548	PDZRN3	Q9UPQ7	1066 aa		28.14	■■■□□ 2.1
CIRBP-208	ENST00000586548	SCN11A	Q9UI33	1791 aa		28.13	■■■□□ 2.09
CIRBP-208	ENST00000586548	LTBP4	Q8N2S1	1624 aa		28.13	■■■□□ 2.09
CIRBP-208	ENST00000586548	BTBD11	A6QL63	1104 aa		28.12	■■■□□ 2.09
CIRBP-208	ENST00000586548	CHMP4A	Q9BY43	222 aa		28.12	■■■□□ 2.09
CIRBP-208	ENST00000586548	SMC5	Q8IY18	1101 aa		28.12	■■■□□ 2.09
CIRBP-208	ENST00000586548	G2E3	Q7L622	706 aa		28.11	■■■□□ 2.09
CIRBP-208	ENST00000586548	WDR17	Q8IZU2	1322 aa		28.11	■■■□□ 2.09
CIRBP-208	ENST00000586548	COL5A2	P05997	1499 aa	Predicted RBP	28.1	■■■□□ 2.09
CIRBP-208	ENST00000586548	PARP4	Q9UKK3	1724 aa	Known RBP	28.1	■■■□□ 2.09
CIRBP-208	ENST00000586548	FAM161A	Q3B820	660 aa		28.09	■■■□□ 2.09
CIRBP-208	ENST00000586548	HDGFL1	Q5TGJ6	251 aa		28.09	■■■□□ 2.09
CIRBP-208	ENST00000586548	ROBO1	Q9Y6N7	1651 aa		28.09	■■■□□ 2.09
CIRBP-208	ENST00000586548	PHKG2	P15735	406 aa		28.08	■■■□□ 2.09
CIRBP-208	ENST00000586548	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.07	■■■□□ 2.08
CIRBP-208	ENST00000586548	FLII	Q13045	1269 aa		28.07	■■■□□ 2.08
CIRBP-208	ENST00000586548	N4BP2	Q86UW6	1770 aa	Predicted RBP	28.07	■■■□□ 2.08
CIRBP-208	ENST00000586548	KDM6A	O15550	1401 aa	Predicted RBP	28.07	■■■□□ 2.08
CIRBP-208	ENST00000586548	IFNL2	Q8IZJ0	200 aa		28.06	■■■□□ 2.08
CIRBP-208	ENST00000586548	CCT4	P50991	539 aa	Known RBP	28.06	■■■□□ 2.08
CIRBP-208	ENST00000586548	KCNQ3	O43525	872 aa		28.05	■■■□□ 2.08
CIRBP-208	ENST00000586548	C1orf115	Q9H7X2	142 aa		28.05	■■■□□ 2.08
CIRBP-208	ENST00000586548	C8orf34	Q49A92	452 aa		28.04	■■■□□ 2.08
CIRBP-208	ENST00000586548	NECTIN2	Q92692	538 aa		28.04	■■■□□ 2.08
CIRBP-208	ENST00000586548	MRC1	P22897	1456 aa		28.04	■■■□□ 2.08
CIRBP-208	ENST00000586548	HEG1	Q9ULI3	1381 aa		28.04	■■■□□ 2.08
CIRBP-208	ENST00000586548	PXDNL	A1KZ92	1463 aa		28.04	■■■□□ 2.08
CIRBP-208	ENST00000586548	FKBP5	Q13451	457 aa	Predicted RBP	28.02	■■■□□ 2.08
CIRBP-208	ENST00000586548	TOM1L2	Q6ZVM7	507 aa		28.02	■■■□□ 2.08
CIRBP-208	ENST00000586548	GCC1	Q96CN9	775 aa		28.02	■■■□□ 2.08
CIRBP-208	ENST00000586548	HSP90AB1	P08238	724 aa	Known RBP	28.01	■■■□□ 2.07
CIRBP-208	ENST00000586548	SLC52A2	Q9HAB3	445 aa		28.01	■■■□□ 2.07
CIRBP-208	ENST00000586548		F6X3S4	739 aa		28.01	■■■□□ 2.07
CIRBP-208	ENST00000586548	COL22A1	Q8NFW1	1626 aa	Predicted RBP	28	■■■□□ 2.07
CIRBP-208	ENST00000586548	ANP32A	P39687	249 aa	Known RBP	28	■■■□□ 2.07
CIRBP-208	ENST00000586548	SIRT2	Q8IXJ6	389 aa		28	■■■□□ 2.07
CIRBP-208	ENST00000586548	DCAF5	Q96JK2	942 aa		28	■■■□□ 2.07
CIRBP-208	ENST00000586548	CYP27B1	O15528	508 aa		27.99	■■■□□ 2.07
CIRBP-208	ENST00000586548	NUCB1	Q02818	461 aa		27.99	■■■□□ 2.07
CIRBP-208	ENST00000586548	SLC4A10	Q6U841	1118 aa		27.99	■■■□□ 2.07
CIRBP-208	ENST00000586548	CARD10	Q9BWT7	1032 aa		27.99	■■■□□ 2.07
CIRBP-208	ENST00000586548	ATP10D	Q9P241	1426 aa		27.99	■■■□□ 2.07
CIRBP-208	ENST00000586548	EIF2S2	P20042	333 aa	Known RBP	27.98	■■■□□ 2.07
CIRBP-208	ENST00000586548	GIGYF1	O75420	1035 aa	Predicted RBP	27.97	■■■□□ 2.07
CIRBP-208	ENST00000586548	RPAP2	Q8IXW5	612 aa	Predicted RBP	27.97	■■■□□ 2.07
CIRBP-208	ENST00000586548	MEIS3	Q99687	375 aa		27.97	■■■□□ 2.07
CIRBP-208	ENST00000586548	ANKRD44	Q8N8A2	993 aa		27.96	■■■□□ 2.07
CIRBP-208	ENST00000586548	COL14A1	Q05707	1796 aa	Known RBP	27.95	■■■□□ 2.06
CIRBP-208	ENST00000586548	CHPF2	Q9P2E5	772 aa		27.95	■■■□□ 2.06
CIRBP-208	ENST00000586548	PCDH11X	Q9BZA7	1347 aa		27.94	■■■□□ 2.06
CIRBP-208	ENST00000586548	PCDH11Y	Q9BZA8	1340 aa		27.94	■■■□□ 2.06
CIRBP-208	ENST00000586548	ZNF790	Q6PG37	636 aa		27.94	■■■□□ 2.06
CIRBP-208	ENST00000586548	EVA1C	P58658	441 aa		27.93	■■■□□ 2.06
CIRBP-208	ENST00000586548	ZCRB1	Q8TBF4	217 aa	Known RBP	27.93	■■■□□ 2.06
CIRBP-208	ENST00000586548	CERK	Q8TCT0	537 aa		27.93	■■■□□ 2.06
CIRBP-208	ENST00000586548	PHAX	Q9H814	394 aa	Known RBP	27.93	■■■□□ 2.06
CIRBP-208	ENST00000586548	IL2RB	P14784	551 aa		27.92	■■■□□ 2.06
CIRBP-208	ENST00000586548	CEP85	Q6P2H3	762 aa		27.92	■■■□□ 2.06
CIRBP-208	ENST00000586548	CHD1L	Q86WJ1	897 aa		27.92	■■■□□ 2.06
CIRBP-208	ENST00000586548	DBF4	Q9UBU7	674 aa	Predicted RBP	27.92	■■■□□ 2.06
CIRBP-208	ENST00000586548	LARP1	Q6PKG0	1096 aa	Known RBP	27.92	■■■□□ 2.06
CIRBP-208	ENST00000586548	NFATC2IP	Q8NCF5	419 aa		27.92	■■■□□ 2.06
CIRBP-208	ENST00000586548	STRN4	Q9NRL3	753 aa		27.92	■■■□□ 2.06
CIRBP-208	ENST00000586548	SHANK3	Q9BYB0	1731 aa		27.91	■■■□□ 2.06
CIRBP-208	ENST00000586548	GNAI3	P08754	354 aa		27.89	■■■□□ 2.06
CIRBP-208	ENST00000586548	DCTPP1	Q9H773	170 aa		27.89	■■■□□ 2.06
CIRBP-208	ENST00000586548	C5	P01031	1676 aa		27.89	■■■□□ 2.06
CIRBP-208	ENST00000586548	COL16A1	Q07092	1604 aa	Predicted RBP	27.88	■■■□□ 2.05
CIRBP-208	ENST00000586548	SLC39A6	Q13433	755 aa		27.87	■■■□□ 2.05
CIRBP-208	ENST00000586548	ANKRD45	Q5TZF3	282 aa		27.87	■■■□□ 2.05
CIRBP-208	ENST00000586548	LNPK	Q9C0E8	428 aa		27.87	■■■□□ 2.05
CIRBP-208	ENST00000586548	PHLPP1	O60346	1717 aa		27.87	■■■□□ 2.05
CIRBP-208	ENST00000586548	GNAI2	P04899	355 aa		27.87	■■■□□ 2.05
CIRBP-208	ENST00000586548	CABP4	P57796	275 aa		27.87	■■■□□ 2.05
CIRBP-208	ENST00000586548	NPM2	Q86SE8	214 aa	Known RBP	27.87	■■■□□ 2.05
CIRBP-208	ENST00000586548	NKX1-1	Q15270	411 aa	Predicted RBP	27.86	■■■□□ 2.05
CIRBP-208	ENST00000586548	MSH5	O43196	834 aa		27.85	■■■□□ 2.05
CIRBP-208	ENST00000586548	IPO9	Q96P70	1041 aa	Known RBP	27.85	■■■□□ 2.05
CIRBP-208	ENST00000586548	BTG4	Q9NY30	223 aa		27.85	■■■□□ 2.05
CIRBP-208	ENST00000586548	PRAMEF22	A3QJZ6	481 aa		27.84	■■■□□ 2.05
CIRBP-208	ENST00000586548	HMMR	O75330	724 aa		27.84	■■■□□ 2.05
CIRBP-208	ENST00000586548	TTC5	Q8N0Z6	440 aa		27.84	■■■□□ 2.05
CIRBP-208	ENST00000586548	HYPK	Q9NX55	129 aa		27.84	■■■□□ 2.05
CIRBP-208	ENST00000586548	DNAAF4	Q8WXU2	420 aa		27.84	■■■□□ 2.05
CIRBP-208	ENST00000586548	SRCIN1	Q9C0H9	1055 aa		27.84	■■■□□ 2.05
CIRBP-208	ENST00000586548	DDX21	Q9NR30	783 aa	Known RBP eCLIP	27.83	■■■□□ 2.05
CIRBP-208	ENST00000586548	ADCY9	O60503	1353 aa		27.83	■■■□□ 2.05
CIRBP-208	ENST00000586548	ERVV-2	B6SEH9	535 aa		27.82	■■■□□ 2.04
CIRBP-208	ENST00000586548	ANXA1	P04083	346 aa		27.82	■■■□□ 2.04
CIRBP-208	ENST00000586548	ZNF496	Q96IT1	587 aa	Predicted RBP	27.82	■■■□□ 2.04
CIRBP-208	ENST00000586548	PI4KAP2	A4QPH2	592 aa		27.81	■■■□□ 2.04
CIRBP-208	ENST00000586548	PI4KAP1	Q8N8J0	262 aa		27.81	■■■□□ 2.04
CIRBP-208	ENST00000586548	TOM1	O60784	492 aa		27.81	■■■□□ 2.04
CIRBP-208	ENST00000586548	PROSER3	Q2NL68	480 aa		27.81	■■■□□ 2.04
CIRBP-208	ENST00000586548	FMNL2	Q96PY5	1086 aa		27.81	■■■□□ 2.04
CIRBP-208	ENST00000586548	PLCH1	Q4KWH8	1693 aa		27.8	■■■□□ 2.04
CIRBP-208	ENST00000586548	LAMB4	A4D0S4	1761 aa		27.8	■■■□□ 2.04
CIRBP-208	ENST00000586548	GLI3	P10071	1580 aa		27.8	■■■□□ 2.04

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