RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 DIAPH1O60610 1272 aaKnown RBP15.19■□□□□ 0.02
ACTN4-209ENST00000586538 GPR162Q16538 588 aa15.19■□□□□ 0.02
ACTN4-209ENST00000586538 CC2D1BQ5T0F9 858 aaKnown RBP15.19■□□□□ 0.02
ACTN4-209ENST00000586538 ASAP1Q9ULH1 1129 aa15.19■□□□□ 0.02
ACTN4-209ENST00000586538 AKAP4Q5JQC9 854 aa15.18■□□□□ 0.02
ACTN4-209ENST00000586538 ATG3Q9NT62 314 aa15.18■□□□□ 0.02
ACTN4-209ENST00000586538 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.17■□□□□ 0.02
ACTN4-209ENST00000586538 GNPATO15228 680 aa15.17■□□□□ 0.02
ACTN4-209ENST00000586538 PHF14O94880 888 aa15.17■□□□□ 0.02
ACTN4-209ENST00000586538 ADRA2BP18089 450 aa15.17■□□□□ 0.02
ACTN4-209ENST00000586538 AEBP1Q8IUX7 1158 aa15.17■□□□□ 0.02
ACTN4-209ENST00000586538 RBM42Q9BTD8 480 aaKnown RBP15.17■□□□□ 0.02
ACTN4-209ENST00000586538 RTCBQ9Y3I0 505 aaKnown RBP15.17■□□□□ 0.02
ACTN4-209ENST00000586538 CD2APQ9Y5K6 639 aa15.17■□□□□ 0.02
ACTN4-209ENST00000586538 CHD4Q14839 1912 aa15.17■□□□□ 0.02
ACTN4-209ENST00000586538 KDM6AO15550 1401 aaPredicted RBP15.17■□□□□ 0.02
ACTN4-209ENST00000586538 LINC00116Q8NCU8 138 aa15.16■□□□□ 0.02
ACTN4-209ENST00000586538 CFAP53Q96M91 514 aa15.16■□□□□ 0.02
ACTN4-209ENST00000586538 GRIN3BO60391 1043 aa15.15■□□□□ 0.02
ACTN4-209ENST00000586538 RC3H1Q5TC82 1133 aaKnown RBP15.15■□□□□ 0.02
ACTN4-209ENST00000586538 MSL1Q68DK7 614 aa15.15■□□□□ 0.02
ACTN4-209ENST00000586538 CNTNAP4Q9C0A0 1308 aa15.15■□□□□ 0.02
ACTN4-209ENST00000586538 SCN11AQ9UI33 1791 aa15.14■□□□□ 0.01
ACTN4-209ENST00000586538 TRAPPC3LQ5T215 181 aa15.14■□□□□ 0.01
ACTN4-209ENST00000586538 COL5A3P25940 1745 aaPredicted RBP15.13■□□□□ 0.01
ACTN4-209ENST00000586538 ITPK1Q13572 414 aa15.13■□□□□ 0.01
ACTN4-209ENST00000586538 PELP1Q8IZL8 1130 aaKnown RBP15.13■□□□□ 0.01
ACTN4-209ENST00000586538 CICQ96RK0 1608 aaPredicted RBP15.13■□□□□ 0.01
ACTN4-209ENST00000586538 HMOX1P09601 288 aa15.12■□□□□ 0.01
ACTN4-209ENST00000586538 NFATC2IPQ8NCF5 419 aa15.12■□□□□ 0.01
ACTN4-209ENST00000586538 SLC52A2Q9HAB3 445 aa15.12■□□□□ 0.01
ACTN4-209ENST00000586538 NUDCQ9Y266 331 aa15.12■□□□□ 0.01
ACTN4-209ENST00000586538 NLGN1Q8N2Q7 840 aa15.11■□□□□ 0.01
ACTN4-209ENST00000586538 GAS2L2Q8NHY3 880 aa15.11■□□□□ 0.01
ACTN4-209ENST00000586538 MRC1P22897 1456 aa15.11■□□□□ 0.01
ACTN4-209ENST00000586538 UTRNP46939 3433 aa15.1■□□□□ 0.01
ACTN4-209ENST00000586538 U2SURPO15042 1029 aaKnown RBP15.1■□□□□ 0.01
ACTN4-209ENST00000586538 RPS6KA4O75676 772 aa15.1■□□□□ 0.01
ACTN4-209ENST00000586538 RFC4P35249 363 aa15.1■□□□□ 0.01
ACTN4-209ENST00000586538 NLGN2Q8NFZ4 835 aa15.1■□□□□ 0.01
ACTN4-209ENST00000586538 COL3A1P02461 1466 aaPredicted RBP15.09■□□□□ 0.01
ACTN4-209ENST00000586538 RNMTO43148 476 aaKnown RBP15.09■□□□□ 0.01
ACTN4-209ENST00000586538 PTCD1O75127 700 aaKnown RBP15.09■□□□□ 0.01
ACTN4-209ENST00000586538 MTHFSDQ2M296 383 aaKnown RBP15.07■□□□□ 0
ACTN4-209ENST00000586538 TTC5Q8N0Z6 440 aa15.07■□□□□ 0
ACTN4-209ENST00000586538 VIRMAQ69YN4 1812 aaKnown RBP15.07■□□□□ 0
ACTN4-209ENST00000586538 ADAMTS7Q9UKP4 1686 aa15.06■□□□□ 0
ACTN4-209ENST00000586538 GNAT3A8MTJ3 354 aa15.06■□□□□ 0
ACTN4-209ENST00000586538 MMP10P09238 476 aa15.06■□□□□ 0
ACTN4-209ENST00000586538 CRKLP46109 303 aaKnown RBP15.06■□□□□ 0
ACTN4-209ENST00000586538 CNGB1Q14028 1251 aaPredicted RBP15.06■□□□□ 0
ACTN4-209ENST00000586538 AMIGO3Q86WK7 504 aa15.06■□□□□ 0
ACTN4-209ENST00000586538 VSIG10Q8N0Z9 540 aa15.06■□□□□ 0
ACTN4-209ENST00000586538 ZNF784Q8NCA9 323 aaPredicted RBP15.06■□□□□ 0
ACTN4-209ENST00000586538 SLC4A9Q96Q91 983 aa15.06■□□□□ 0
ACTN4-209ENST00000586538 CCDC87Q9NVE4 849 aa15.06■□□□□ 0
ACTN4-209ENST00000586538 NEFMP07197 916 aa15.05■□□□□ -0
ACTN4-209ENST00000586538 TEFQ10587 303 aa15.05■□□□□ -0
ACTN4-209ENST00000586538 ARHGEF1Q92888 912 aaKnown RBP15.05■□□□□ -0
ACTN4-209ENST00000586538 PARP3Q9Y6F1 533 aa15.05■□□□□ -0
ACTN4-209ENST00000586538 TJP1Q07157 1748 aa15.05■□□□□ -0
ACTN4-209ENST00000586538 TGFB2P61812 414 aa15.04■□□□□ -0
ACTN4-209ENST00000586538 LGR6Q9HBX8 967 aa15.04■□□□□ -0
ACTN4-209ENST00000586538 C4AP0C0L4 1744 aa15.03■□□□□ -0
ACTN4-209ENST00000586538 ZPR1O75312 459 aa15.03■□□□□ -0
ACTN4-209ENST00000586538 USP42Q9H9J4 1324 aaKnown RBP15.02■□□□□ -0
ACTN4-209ENST00000586538 STARD3NLO95772 234 aa15.02■□□□□ -0
ACTN4-209ENST00000586538 GYS1P13807 737 aa15.02■□□□□ -0
ACTN4-209ENST00000586538 YBX3P16989 372 aaKnown RBP eCLIP15.02■□□□□ -07e-8■■□□□ 12.3
ACTN4-209ENST00000586538 TEX13AQ9BXU3 409 aaPredicted RBP15.02■□□□□ -0
ACTN4-209ENST00000586538 MYH14Q7Z406 1995 aaKnown RBP15.02□□□□□ -0.01
ACTN4-209ENST00000586538 GOLGB1Q14789 3259 aaKnown RBP15.02□□□□□ -0.01
ACTN4-209ENST00000586538 KIF13BQ9NQT8 1826 aa15.01□□□□□ -0.01
ACTN4-209ENST00000586538 FCHSD2O94868 740 aa15.01□□□□□ -0.01
ACTN4-209ENST00000586538 PPP2R1AP30153 589 aa15.01□□□□□ -0.01
ACTN4-209ENST00000586538 PRKAR2BP31323 418 aa15.01□□□□□ -0.01
ACTN4-209ENST00000586538 SMIM5Q71RC9 77 aa15.01□□□□□ -0.01
ACTN4-209ENST00000586538 NPM2Q86SE8 214 aaKnown RBP15.01□□□□□ -0.01
ACTN4-209ENST00000586538 RTF1Q92541 710 aaKnown RBP15.01□□□□□ -0.01
ACTN4-209ENST00000586538 KCPQ6ZWJ8 1503 aa15.01□□□□□ -0.01
ACTN4-209ENST00000586538 UBR2Q8IWV8 1755 aa15.01□□□□□ -0.01
ACTN4-209ENST00000586538 C10orf71Q711Q0 1435 aa15□□□□□ -0.01
ACTN4-209ENST00000586538 U2AF1L5P0DN76 240 aaPredicted RBP15□□□□□ -0.01
ACTN4-209ENST00000586538 U2AF1Q01081 240 aaKnown RBP eCLIP15□□□□□ -0.01
ACTN4-209ENST00000586538 DNAJC10Q8IXB1 793 aa15□□□□□ -0.01
ACTN4-209ENST00000586538 A0A087WZG4 1122 aa14.99□□□□□ -0.01
ACTN4-209ENST00000586538 SLC39A6Q13433 755 aa14.99□□□□□ -0.01
ACTN4-209ENST00000586538 RSPH6AQ9H0K4 717 aa14.99□□□□□ -0.01
ACTN4-209ENST00000586538 PNNQ9H307 717 aaKnown RBP14.99□□□□□ -0.01
ACTN4-209ENST00000586538 COL15A1P39059 1388 aa14.98□□□□□ -0.01
ACTN4-209ENST00000586538 SOS1Q07889 1333 aaPredicted RBP14.98□□□□□ -0.01
ACTN4-209ENST00000586538 CYP19A1P11511 503 aaPredicted RBP14.98□□□□□ -0.01
ACTN4-209ENST00000586538 INTS5Q6P9B9 1019 aaKnown RBP14.98□□□□□ -0.01
ACTN4-209ENST00000586538 ZNF790Q6PG37 636 aa14.98□□□□□ -0.01
ACTN4-209ENST00000586538 FMNL2Q96PY5 1086 aa14.98□□□□□ -0.01
ACTN4-209ENST00000586538 CEMIPQ8WUJ3 1361 aa14.98□□□□□ -0.01
ACTN4-209ENST00000586538 PXDNLA1KZ92 1463 aa14.97□□□□□ -0.01
ACTN4-209ENST00000586538 HTATSF1O43719 755 aaKnown RBP14.97□□□□□ -0.01
ACTN4-209ENST00000586538 GIGYF1O75420 1035 aaPredicted RBP14.97□□□□□ -0.01
ACTN4-209ENST00000586538 HEG1Q9ULI3 1381 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms