RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 SSFA2P28290 1259 aa22.99■■□□□ 1.27
TRIM47-203ENST00000586495 MSL1Q68DK7 614 aa22.99■■□□□ 1.27
TRIM47-203ENST00000586495 LINC00116Q8NCU8 138 aa22.99■■□□□ 1.27
TRIM47-203ENST00000586495 PHF14O94880 888 aa22.98■■□□□ 1.27
TRIM47-203ENST00000586495 NPC1L1Q9UHC9 1359 aa22.98■■□□□ 1.27
TRIM47-203ENST00000586495 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.97■■□□□ 1.27
TRIM47-203ENST00000586495 ITPK1Q13572 414 aa22.97■■□□□ 1.27
TRIM47-203ENST00000586495 GPR162Q16538 588 aa22.97■■□□□ 1.27
TRIM47-203ENST00000586495 RBM42Q9BTD8 480 aaKnown RBP22.97■■□□□ 1.27
TRIM47-203ENST00000586495 KDM6AO15550 1401 aaPredicted RBP22.96■■□□□ 1.27
TRIM47-203ENST00000586495 DIAPH1O60610 1272 aaKnown RBP22.95■■□□□ 1.26
TRIM47-203ENST00000586495 GNPATO15228 680 aa22.94■■□□□ 1.26
TRIM47-203ENST00000586495 AKAP4Q5JQC9 854 aa22.94■■□□□ 1.26
TRIM47-203ENST00000586495 UBR3Q6ZT12 1888 aa22.94■■□□□ 1.26
TRIM47-203ENST00000586495 AMIGO3Q86WK7 504 aa22.93■■□□□ 1.26
TRIM47-203ENST00000586495 HMOX1P09601 288 aa22.92■■□□□ 1.26
TRIM47-203ENST00000586495 CNGB1Q14028 1251 aaPredicted RBP22.92■■□□□ 1.26
TRIM47-203ENST00000586495 PELP1Q8IZL8 1130 aaKnown RBP22.92■■□□□ 1.26
TRIM47-203ENST00000586495 NFATC2IPQ8NCF5 419 aa22.92■■□□□ 1.26
TRIM47-203ENST00000586495 NLGN2Q8NFZ4 835 aa22.92■■□□□ 1.26
TRIM47-203ENST00000586495 SMIM5Q71RC9 77 aa22.91■■□□□ 1.26
TRIM47-203ENST00000586495 RTCBQ9Y3I0 505 aaKnown RBP22.91■■□□□ 1.26
TRIM47-203ENST00000586495 CD2APQ9Y5K6 639 aa22.91■■□□□ 1.26
TRIM47-203ENST00000586495 RC3H1Q5TC82 1133 aaKnown RBP22.9■■□□□ 1.26
TRIM47-203ENST00000586495 SLC4A9Q96Q91 983 aa22.9■■□□□ 1.26
TRIM47-203ENST00000586495 TRAPPC3LQ5T215 181 aa22.89■■□□□ 1.25
TRIM47-203ENST00000586495 ZNF831Q5JPB2 1677 aa22.89■■□□□ 1.25
TRIM47-203ENST00000586495 PTCD1O75127 700 aaKnown RBP22.88■■□□□ 1.25
TRIM47-203ENST00000586495 CNTNAP4Q9C0A0 1308 aa22.87■■□□□ 1.25
TRIM47-203ENST00000586495 CHD4Q14839 1912 aa22.87■■□□□ 1.25
TRIM47-203ENST00000586495 ADRA2BP18089 450 aa22.86■■□□□ 1.25
TRIM47-203ENST00000586495 SLC52A2Q9HAB3 445 aa22.86■■□□□ 1.25
TRIM47-203ENST00000586495 U2SURPO15042 1029 aaKnown RBP22.85■■□□□ 1.25
TRIM47-203ENST00000586495 RNMTO43148 476 aaKnown RBP22.85■■□□□ 1.25
TRIM47-203ENST00000586495 GRIN3BO60391 1043 aa22.85■■□□□ 1.25
TRIM47-203ENST00000586495 RPS6KA4O75676 772 aa22.85■■□□□ 1.25
TRIM47-203ENST00000586495 SCN11AQ9UI33 1791 aa22.84■■□□□ 1.25
TRIM47-203ENST00000586495 MTHFSDQ2M296 383 aaKnown RBP22.84■■□□□ 1.25
TRIM47-203ENST00000586495 LGR6Q9HBX8 967 aa22.84■■□□□ 1.25
TRIM47-203ENST00000586495 NLGN1Q8N2Q7 840 aa22.83■■□□□ 1.25
TRIM47-203ENST00000586495 ARHGEF1Q92888 912 aaKnown RBP22.83■■□□□ 1.25
TRIM47-203ENST00000586495 CFAP53Q96M91 514 aa22.83■■□□□ 1.25
TRIM47-203ENST00000586495 RFC4P35249 363 aa22.82■■□□□ 1.24
TRIM47-203ENST00000586495 ZNF784Q8NCA9 323 aaPredicted RBP22.82■■□□□ 1.24
TRIM47-203ENST00000586495 COL3A1P02461 1466 aaPredicted RBP22.81■■□□□ 1.24
TRIM47-203ENST00000586495 COL5A3P25940 1745 aaPredicted RBP22.8■■□□□ 1.24
TRIM47-203ENST00000586495 MMP10P09238 476 aa22.8■■□□□ 1.24
TRIM47-203ENST00000586495 YBX3P16989 372 aaKnown RBP eCLIP22.8■■□□□ 1.24
TRIM47-203ENST00000586495 CRKLP46109 303 aaKnown RBP22.8■■□□□ 1.24
TRIM47-203ENST00000586495 GAS2L2Q8NHY3 880 aa22.8■■□□□ 1.24
TRIM47-203ENST00000586495 UTRNP46939 3433 aa22.78■■□□□ 1.24
TRIM47-203ENST00000586495 NUDCQ9Y266 331 aa22.78■■□□□ 1.24
TRIM47-203ENST00000586495 MRC1P22897 1456 aa22.78■■□□□ 1.24
TRIM47-203ENST00000586495 GYS1P13807 737 aa22.76■■□□□ 1.23
TRIM47-203ENST00000586495 SLC39A6Q13433 755 aa22.76■■□□□ 1.23
TRIM47-203ENST00000586495 MYH14Q7Z406 1995 aaKnown RBP22.76■■□□□ 1.23
TRIM47-203ENST00000586495 GNAT3A8MTJ3 354 aa22.75■■□□□ 1.23
TRIM47-203ENST00000586495 DNAJC10Q8IXB1 793 aa22.75■■□□□ 1.23
TRIM47-203ENST00000586495 CICQ96RK0 1608 aaPredicted RBP22.74■■□□□ 1.23
TRIM47-203ENST00000586495 PPP2R1AP30153 589 aa22.73■■□□□ 1.23
TRIM47-203ENST00000586495 TEFQ10587 303 aa22.73■■□□□ 1.23
TRIM47-203ENST00000586495 INTS5Q6P9B9 1019 aaKnown RBP22.73■■□□□ 1.23
TRIM47-203ENST00000586495 VSIG10Q8N0Z9 540 aa22.73■■□□□ 1.23
TRIM47-203ENST00000586495 CCDC87Q9NVE4 849 aa22.73■■□□□ 1.23
TRIM47-203ENST00000586495 PARP3Q9Y6F1 533 aa22.73■■□□□ 1.23
TRIM47-203ENST00000586495 ADAMTS7Q9UKP4 1686 aa22.73■■□□□ 1.23
TRIM47-203ENST00000586495 TJP1Q07157 1748 aa22.72■■□□□ 1.23
TRIM47-203ENST00000586495 TTC5Q8N0Z6 440 aa22.72■■□□□ 1.23
TRIM47-203ENST00000586495 VIRMAQ69YN4 1812 aaKnown RBP22.72■■□□□ 1.23
TRIM47-203ENST00000586495 PRKAR2BP31323 418 aa22.71■■□□□ 1.23
TRIM47-203ENST00000586495 TGFB2P61812 414 aa22.71■■□□□ 1.23
TRIM47-203ENST00000586495 USP42Q9H9J4 1324 aaKnown RBP22.71■■□□□ 1.23
TRIM47-203ENST00000586495 CYP19A1P11511 503 aaPredicted RBP22.7■■□□□ 1.22
TRIM47-203ENST00000586495 IL17REQ8NFR9 667 aa22.7■■□□□ 1.22
TRIM47-203ENST00000586495 RSPH6AQ9H0K4 717 aa22.7■■□□□ 1.22
TRIM47-203ENST00000586495 ZPR1O75312 459 aa22.69■■□□□ 1.22
TRIM47-203ENST00000586495 U2AF1L5P0DN76 240 aaPredicted RBP22.69■■□□□ 1.22
TRIM47-203ENST00000586495 U2AF1Q01081 240 aaKnown RBP eCLIP22.69■■□□□ 1.22
TRIM47-203ENST00000586495 SRP68Q9UHB9 627 aaKnown RBP22.69■■□□□ 1.22
TRIM47-203ENST00000586495 KCPQ6ZWJ8 1503 aa22.68■■□□□ 1.22
TRIM47-203ENST00000586495 C4AP0C0L4 1744 aa22.68■■□□□ 1.22
TRIM47-203ENST00000586495 SOS1Q07889 1333 aaPredicted RBP22.67■■□□□ 1.22
TRIM47-203ENST00000586495 FCHSD2O94868 740 aa22.67■■□□□ 1.22
TRIM47-203ENST00000586495 PHACTR3Q96KR7 559 aa22.67■■□□□ 1.22
TRIM47-203ENST00000586495 WWC3Q9ULE0 1092 aa22.67■■□□□ 1.22
TRIM47-203ENST00000586495 C10orf71Q711Q0 1435 aa22.66■■□□□ 1.22
TRIM47-203ENST00000586495 FKBP8Q14318 412 aa22.66■■□□□ 1.22
TRIM47-203ENST00000586495 ZNF790Q6PG37 636 aa22.66■■□□□ 1.22
TRIM47-203ENST00000586495 STARD3NLO95772 234 aa22.65■■□□□ 1.22
TRIM47-203ENST00000586495 TEX13AQ9BXU3 409 aaPredicted RBP22.65■■□□□ 1.22
TRIM47-203ENST00000586495 ZBTB1Q9Y2K1 713 aa22.65■■□□□ 1.22
TRIM47-203ENST00000586495 KIF13BQ9NQT8 1826 aa22.65■■□□□ 1.22
TRIM47-203ENST00000586495 GOLGB1Q14789 3259 aaKnown RBP22.65■■□□□ 1.22
TRIM47-203ENST00000586495 USPL1Q5W0Q7 1092 aa22.64■■□□□ 1.21
TRIM47-203ENST00000586495 RTF1Q92541 710 aaKnown RBP22.64■■□□□ 1.21
TRIM47-203ENST00000586495 PXDNLA1KZ92 1463 aa22.64■■□□□ 1.21
TRIM47-203ENST00000586495 CEMIPQ8WUJ3 1361 aa22.63■■□□□ 1.21
TRIM47-203ENST00000586495 A0A0G2JLW4 131 aa22.63■■□□□ 1.21
TRIM47-203ENST00000586495 ZNF496Q96IT1 587 aaPredicted RBP22.63■■□□□ 1.21
TRIM47-203ENST00000586495 NARFQ9UHQ1 456 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms