RNA–Protein interactions for RNA: ENST00000586365.5

CXXC1-204, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-204ENST00000586365 ATG3Q9NT62 314 aa27.45■■□□□ 1.98
CXXC1-204ENST00000586365 PHKG2P15735 406 aa27.44■■□□□ 1.98
CXXC1-204ENST00000586365 APLP1P51693 650 aa27.43■■□□□ 1.98
CXXC1-204ENST00000586365 TRAPPC3LQ5T215 181 aa27.43■■□□□ 1.98
CXXC1-204ENST00000586365 NLGN1Q8N2Q7 840 aa27.43■■□□□ 1.98
CXXC1-204ENST00000586365 KIF13BQ9NQT8 1826 aa27.43■■□□□ 1.98
CXXC1-204ENST00000586365 RTCBQ9Y3I0 505 aaKnown RBP27.42■■□□□ 1.98
CXXC1-204ENST00000586365 PXDNLA1KZ92 1463 aa27.42■■□□□ 1.98
CXXC1-204ENST00000586365 ANKRD26Q9UPS8 1709 aa27.41■■□□□ 1.98
CXXC1-204ENST00000586365 BCS1LQ9Y276 419 aa27.41■■□□□ 1.98
CXXC1-204ENST00000586365 TOMM70O94826 608 aa27.4■■□□□ 1.98
CXXC1-204ENST00000586365 A0A0G2JLW4 131 aa27.39■■□□□ 1.98
CXXC1-204ENST00000586365 N4BP2Q86UW6 1770 aaPredicted RBP27.38■■□□□ 1.97
CXXC1-204ENST00000586365 ADRA2BP18089 450 aa27.37■■□□□ 1.97
CXXC1-204ENST00000586365 RC3H1Q5TC82 1133 aaKnown RBP27.37■■□□□ 1.97
CXXC1-204ENST00000586365 ARHGAP27Q6ZUM4 889 aa27.37■■□□□ 1.97
CXXC1-204ENST00000586365 KIAA1551Q9HCM1 1747 aa27.37■■□□□ 1.97
CXXC1-204ENST00000586365 POLKQ9UBT6 870 aa27.37■■□□□ 1.97
CXXC1-204ENST00000586365 CCDC87Q9NVE4 849 aa27.36■■□□□ 1.97
CXXC1-204ENST00000586365 ERVV-2B6SEH9 535 aa27.35■■□□□ 1.97
CXXC1-204ENST00000586365 ARHGEF1Q92888 912 aaKnown RBP27.35■■□□□ 1.97
CXXC1-204ENST00000586365 KDRP35968 1356 aa27.35■■□□□ 1.97
CXXC1-204ENST00000586365 PLEKHG2Q9H7P9 1386 aa27.35■■□□□ 1.97
CXXC1-204ENST00000586365 C10orf71Q711Q0 1435 aa27.34■■□□□ 1.97
CXXC1-204ENST00000586365 RBM42Q9BTD8 480 aaKnown RBP27.34■■□□□ 1.97
CXXC1-204ENST00000586365 ZNF831Q5JPB2 1677 aa27.33■■□□□ 1.97
CXXC1-204ENST00000586365 DPEP1P16444 411 aa27.33■■□□□ 1.97
CXXC1-204ENST00000586365 RFC4P35249 363 aa27.33■■□□□ 1.97
CXXC1-204ENST00000586365 DNAJC5GQ8N7S2 189 aa27.33■■□□□ 1.97
CXXC1-204ENST00000586365 SLC4A9Q96Q91 983 aa27.33■■□□□ 1.97
CXXC1-204ENST00000586365 FCHSD2O94868 740 aa27.32■■□□□ 1.96
CXXC1-204ENST00000586365 HSP90AB1P08238 724 aaKnown RBP27.32■■□□□ 1.96
CXXC1-204ENST00000586365 GYS1P13807 737 aa27.32■■□□□ 1.96
CXXC1-204ENST00000586365 EIF4A2Q14240 407 aaKnown RBP27.32■■□□□ 1.96
CXXC1-204ENST00000586365 PARP3Q9Y6F1 533 aa27.32■■□□□ 1.96
CXXC1-204ENST00000586365 RPS6KA4O75676 772 aa27.31■■□□□ 1.96
CXXC1-204ENST00000586365 DCAF5Q96JK2 942 aa27.31■■□□□ 1.96
CXXC1-204ENST00000586365 CNTNAP4Q9C0A0 1308 aa27.31■■□□□ 1.96
CXXC1-204ENST00000586365 NMRK2Q9NPI5 230 aa27.3■■□□□ 1.96
CXXC1-204ENST00000586365 C4AP0C0L4 1744 aa27.3■■□□□ 1.96
CXXC1-204ENST00000586365 BRCA1P38398 1863 aaKnown RBP27.27■■□□□ 1.96
CXXC1-204ENST00000586365 COL5A3P25940 1745 aaPredicted RBP27.27■■□□□ 1.96
CXXC1-204ENST00000586365 PLEKHO1Q53GL0 409 aaPredicted RBP27.27■■□□□ 1.96
CXXC1-204ENST00000586365 KCNA3P22001 575 aa27.26■■□□□ 1.95
CXXC1-204ENST00000586365 C9orf131Q5VYM1 1079 aa27.26■■□□□ 1.95
CXXC1-204ENST00000586365 RBM46Q8TBY0 533 aaKnown RBP27.26■■□□□ 1.95
CXXC1-204ENST00000586365 TNNT2P45379 298 aaPredicted RBP27.25■■□□□ 1.95
CXXC1-204ENST00000586365 CABP4P57796 275 aa27.25■■□□□ 1.95
CXXC1-204ENST00000586365 C16orf71Q8IYS4 520 aaPredicted RBP27.25■■□□□ 1.95
CXXC1-204ENST00000586365 PIM2Q9P1W9 311 aa27.25■■□□□ 1.95
CXXC1-204ENST00000586365 MYH14Q7Z406 1995 aaKnown RBP27.25■■□□□ 1.95
CXXC1-204ENST00000586365 ARFGEF1Q9Y6D6 1849 aa27.24■■□□□ 1.95
CXXC1-204ENST00000586365 AMOTQ4VCS5 1084 aa27.23■■□□□ 1.95
CXXC1-204ENST00000586365 ZNF530Q6P9A1 599 aaPredicted RBP27.22■■□□□ 1.95
CXXC1-204ENST00000586365 DALRD3Q5D0E6 543 aaKnown RBP27.2■■□□□ 1.94
CXXC1-204ENST00000586365 KDM2BQ8NHM5 1336 aa27.19■■□□□ 1.94
CXXC1-204ENST00000586365 WDR90Q96KV7 1748 aa27.19■■□□□ 1.94
CXXC1-204ENST00000586365 KDM6AO15550 1401 aaPredicted RBP27.19■■□□□ 1.94
CXXC1-204ENST00000586365 PTCD1O75127 700 aaKnown RBP27.19■■□□□ 1.94
CXXC1-204ENST00000586365 MTHFSP49914 203 aa27.19■■□□□ 1.94
CXXC1-204ENST00000586365 FSTL1Q12841 308 aa27.19■■□□□ 1.94
CXXC1-204ENST00000586365 TRIM26Q12899 539 aaPredicted RBP27.19■■□□□ 1.94
CXXC1-204ENST00000586365 CRKLP46109 303 aaKnown RBP27.18■■□□□ 1.94
CXXC1-204ENST00000586365 C1orf141Q5JVX7 400 aa27.17■■□□□ 1.94
CXXC1-204ENST00000586365 SRP68Q9UHB9 627 aaKnown RBP27.17■■□□□ 1.94
CXXC1-204ENST00000586365 USP42Q9H9J4 1324 aaKnown RBP27.16■■□□□ 1.94
CXXC1-204ENST00000586365 FKBP8Q14318 412 aa27.16■■□□□ 1.94
CXXC1-204ENST00000586365 NFATC2IPQ8NCF5 419 aa27.16■■□□□ 1.94
CXXC1-204ENST00000586365 KLRG1Q96E93 195 aa27.16■■□□□ 1.94
CXXC1-204ENST00000586365 POLR3GLQ9BT43 218 aa27.16■■□□□ 1.94
CXXC1-204ENST00000586365 RNF181Q9P0P0 153 aa27.16■■□□□ 1.94
CXXC1-204ENST00000586365 DDR1Q08345 913 aa27.14■■□□□ 1.94
CXXC1-204ENST00000586365 KCPQ6ZWJ8 1503 aa27.13■■□□□ 1.93
CXXC1-204ENST00000586365 JMYQ8N9B5 988 aa27.13■■□□□ 1.93
CXXC1-204ENST00000586365 RRAGCQ9HB90 399 aa27.13■■□□□ 1.93
CXXC1-204ENST00000586365 HTRA3P83110 453 aa27.12■■□□□ 1.93
CXXC1-204ENST00000586365 TIMELESSQ9UNS1 1208 aa27.12■■□□□ 1.93
CXXC1-204ENST00000586365 SBF1O95248 1867 aa27.12■■□□□ 1.93
CXXC1-204ENST00000586365 CHRNA5P30532 468 aa27.11■■□□□ 1.93
CXXC1-204ENST00000586365 TM4SF1P30408 202 aa27.1■■□□□ 1.93
CXXC1-204ENST00000586365 POLRMTO00411 1230 aaKnown RBP27.09■■□□□ 1.93
CXXC1-204ENST00000586365 INTS5Q6P9B9 1019 aaKnown RBP27.09■■□□□ 1.93
CXXC1-204ENST00000586365 AEBP1Q8IUX7 1158 aa27.09■■□□□ 1.93
CXXC1-204ENST00000586365 ZPR1O75312 459 aa27.08■■□□□ 1.93
CXXC1-204ENST00000586365 TNRC6CQ9HCJ0 1690 aaKnown RBP27.07■■□□□ 1.92
CXXC1-204ENST00000586365 TJP1Q07157 1748 aa27.07■■□□□ 1.92
CXXC1-204ENST00000586365 SULT6B1Q6IMI4 303 aa27.06■■□□□ 1.92
CXXC1-204ENST00000586365 SMC1BQ8NDV3 1235 aa27.06■■□□□ 1.92
CXXC1-204ENST00000586365 PANK3Q9H999 370 aa27.06■■□□□ 1.92
CXXC1-204ENST00000586365 COL13A1Q5TAT6 717 aaPredicted RBP27.05■■□□□ 1.92
CXXC1-204ENST00000586365 USPL1Q5W0Q7 1092 aa27.05■■□□□ 1.92
CXXC1-204ENST00000586365 ZC3H4Q9UPT8 1303 aaKnown RBP27.05■■□□□ 1.92
CXXC1-204ENST00000586365 SCN11AQ9UI33 1791 aa27.04■■□□□ 1.92
CXXC1-204ENST00000586365 MORC1Q86VD1 984 aa27.03■■□□□ 1.92
CXXC1-204ENST00000586365 DNAJC10Q8IXB1 793 aa27.03■■□□□ 1.92
CXXC1-204ENST00000586365 ADAMTS7Q9UKP4 1686 aa27.03■■□□□ 1.92
CXXC1-204ENST00000586365 PCNTO95613 3336 aa27.03■■□□□ 1.92
CXXC1-204ENST00000586365 SOS1Q07889 1333 aaPredicted RBP27.01■■□□□ 1.91
CXXC1-204ENST00000586365 AKAP4Q5JQC9 854 aa27.01■■□□□ 1.91
CXXC1-204ENST00000586365 LMNB1P20700 586 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms