RNA–Protein interactions for RNA: ENST00000586287.1

TREM1-203, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

TSL 2

Gene TREM1, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-203ENST00000586287 NFATC2IPQ8NCF5 419 aa10.73□□□□□ -0.69
TREM1-203ENST00000586287 IFT57Q9NWB7 429 aa10.73□□□□□ -0.69
TREM1-203ENST00000586287 MIS18AQ9NYP9 233 aa10.73□□□□□ -0.69
TREM1-203ENST00000586287 BCL9O00512 1426 aa10.73□□□□□ -0.69
TREM1-203ENST00000586287 TOGARAM1Q9Y4F4 1720 aa10.72□□□□□ -0.69
TREM1-203ENST00000586287 E9PSI1 815 aa10.72□□□□□ -0.69
TREM1-203ENST00000586287 CABP4P57796 275 aa10.72□□□□□ -0.69
TREM1-203ENST00000586287 GNAI1P63096 354 aa10.72□□□□□ -0.69
TREM1-203ENST00000586287 KRT27Q7Z3Y8 459 aa10.72□□□□□ -0.69
TREM1-203ENST00000586287 KCNQ3O43525 872 aa10.71□□□□□ -0.69
TREM1-203ENST00000586287 PRIM1P49642 420 aaKnown RBP10.71□□□□□ -0.69
TREM1-203ENST00000586287 TEFQ10587 303 aa10.71□□□□□ -0.69
TREM1-203ENST00000586287 BRWD3Q6RI45 1802 aa10.71□□□□□ -0.69
TREM1-203ENST00000586287 PIGBQ92521 554 aa10.71□□□□□ -0.69
TREM1-203ENST00000586287 TSR2Q969E8 191 aaKnown RBP10.71□□□□□ -0.69
TREM1-203ENST00000586287 ACSBG1Q96GR2 724 aa10.71□□□□□ -0.69
TREM1-203ENST00000586287 MBIPQ9NS73 344 aa10.71□□□□□ -0.69
TREM1-203ENST00000586287 FANCIQ9NVI1 1328 aa10.71□□□□□ -0.69
TREM1-203ENST00000586287 BABAM1Q9NWV8 329 aa10.71□□□□□ -0.69
TREM1-203ENST00000586287 LAS1LQ9Y4W2 734 aaKnown RBP10.71□□□□□ -0.69
TREM1-203ENST00000586287 BTBD11A6QL63 1104 aa10.7□□□□□ -0.7
TREM1-203ENST00000586287 KCNQ2O43526 872 aa10.7□□□□□ -0.7
TREM1-203ENST00000586287 PTF1AQ7RTS3 328 aa10.7□□□□□ -0.7
TREM1-203ENST00000586287 VIRMAQ69YN4 1812 aaKnown RBP10.7□□□□□ -0.7
TREM1-203ENST00000586287 SIPA1L3O60292 1781 aaPredicted RBP10.7□□□□□ -0.7
TREM1-203ENST00000586287 SLC39A6Q13433 755 aa10.69□□□□□ -0.7
TREM1-203ENST00000586287 MYH16Q9H6N6 1097 aa10.69□□□□□ -0.7
TREM1-203ENST00000586287 TSPYL4Q9UJ04 414 aa10.69□□□□□ -0.7
TREM1-203ENST00000586287 DOT1LQ8TEK3 1739 aa10.68□□□□□ -0.7
TREM1-203ENST00000586287 EIF4A1P60842 406 aaKnown RBP10.68□□□□□ -0.7
TREM1-203ENST00000586287 EXOSC9Q06265 439 aaKnown RBP10.68□□□□□ -0.7
TREM1-203ENST00000586287 KRT24Q2M2I5 525 aa10.68□□□□□ -0.7
TREM1-203ENST00000586287 ZNF790Q6PG37 636 aa10.68□□□□□ -0.7
TREM1-203ENST00000586287 FAM196AQ6ZSG2 479 aa10.68□□□□□ -0.7
TREM1-203ENST00000586287 ATG3Q9NT62 314 aa10.68□□□□□ -0.7
TREM1-203ENST00000586287 TMOD3Q9NYL9 352 aa10.68□□□□□ -0.7
TREM1-203ENST00000586287 HEG1Q9ULI3 1381 aa10.67□□□□□ -0.7
TREM1-203ENST00000586287 TSPYL6Q8N831 410 aa10.67□□□□□ -0.7
TREM1-203ENST00000586287 C8orf58Q8NAV2 365 aa10.67□□□□□ -0.7
TREM1-203ENST00000586287 SYTL4Q96C24 671 aaPredicted RBP10.67□□□□□ -0.7
TREM1-203ENST00000586287 ASAP1Q9ULH1 1129 aa10.67□□□□□ -0.7
TREM1-203ENST00000586287 ITGB4P16144 1822 aa10.67□□□□□ -0.7
TREM1-203ENST00000586287 KDM3BQ7LBC6 1761 aa10.67□□□□□ -0.7
TREM1-203ENST00000586287 ZNF496Q96IT1 587 aaPredicted RBP10.66□□□□□ -0.7
TREM1-203ENST00000586287 VAMP4O75379 141 aa10.65□□□□□ -0.7
TREM1-203ENST00000586287 BCL11BQ9C0K0 894 aaPredicted RBP10.65□□□□□ -0.7
TREM1-203ENST00000586287 NHSQ6T4R5 1651 aa10.65□□□□□ -0.7
TREM1-203ENST00000586287 SBF2Q86WG5 1849 aa10.65□□□□□ -0.71
TREM1-203ENST00000586287 KCPQ6ZWJ8 1503 aa10.64□□□□□ -0.71
TREM1-203ENST00000586287 PRAMEF22A3QJZ6 481 aa10.64□□□□□ -0.71
TREM1-203ENST00000586287 ELL2O00472 640 aaPredicted RBP10.64□□□□□ -0.71
TREM1-203ENST00000586287 GIGYF1O75420 1035 aaPredicted RBP10.64□□□□□ -0.71
TREM1-203ENST00000586287 TRIM37O94972 964 aa10.64□□□□□ -0.71
TREM1-203ENST00000586287 UPF1Q92900 1129 aaKnown RBP eCLIP10.64□□□□□ -0.71
TREM1-203ENST00000586287 SLC4A9Q96Q91 983 aa10.64□□□□□ -0.71
TREM1-203ENST00000586287 PAPPAQ13219 1627 aa10.64□□□□□ -0.71
TREM1-203ENST00000586287 PTCD1O75127 700 aaKnown RBP10.63□□□□□ -0.71
TREM1-203ENST00000586287 TWISTNBQ3B726 338 aaPredicted RBP10.63□□□□□ -0.71
TREM1-203ENST00000586287 TTC5Q8N0Z6 440 aa10.63□□□□□ -0.71
TREM1-203ENST00000586287 CT47B1P0C2W7 299 aaPredicted RBP10.62□□□□□ -0.71
TREM1-203ENST00000586287 FMNL2Q96PY5 1086 aa10.62□□□□□ -0.71
TREM1-203ENST00000586287 KAT6BQ8WYB5 2073 aa10.62□□□□□ -0.71
TREM1-203ENST00000586287 PALLDQ8WX93 1383 aa10.62□□□□□ -0.71
TREM1-203ENST00000586287 UBR2Q8IWV8 1755 aa10.62□□□□□ -0.71
TREM1-203ENST00000586287 HOXB7P09629 217 aa10.61□□□□□ -0.71
TREM1-203ENST00000586287 SNRPA1P09661 255 aaKnown RBP10.61□□□□□ -0.71
TREM1-203ENST00000586287 VSIG10Q8N0Z9 540 aa10.61□□□□□ -0.71
TREM1-203ENST00000586287 SMARCC1Q92922 1105 aaPredicted RBP10.61□□□□□ -0.71
TREM1-203ENST00000586287 USP16Q9Y5T5 823 aa10.61□□□□□ -0.71
TREM1-203ENST00000586287 BTAF1O14981 1849 aa10.61□□□□□ -0.71
TREM1-203ENST00000586287 SOS1Q07889 1333 aaPredicted RBP10.6□□□□□ -0.71
TREM1-203ENST00000586287 LOC102724428A0A0B4J2F2 783 aa10.6□□□□□ -0.71
TREM1-203ENST00000586287 CENPBP07199 599 aaPredicted RBP10.6□□□□□ -0.71
TREM1-203ENST00000586287 RARSP54136 660 aaKnown RBP10.6□□□□□ -0.71
TREM1-203ENST00000586287 SIK1P57059 783 aa10.6□□□□□ -0.71
TREM1-203ENST00000586287 ZNF428Q96B54 188 aa10.6□□□□□ -0.71
TREM1-203ENST00000586287 RBM42Q9BTD8 480 aaKnown RBP10.6□□□□□ -0.71
TREM1-203ENST00000586287 TCERG1O14776 1098 aaKnown RBP10.59□□□□□ -0.71
TREM1-203ENST00000586287 BCAR3O75815 825 aa10.59□□□□□ -0.71
TREM1-203ENST00000586287 ITPK1Q13572 414 aa10.59□□□□□ -0.71
TREM1-203ENST00000586287 PPP4R3CPQ6ZMV5 832 aa10.59□□□□□ -0.71
TREM1-203ENST00000586287 DNAJC10Q8IXB1 793 aa10.59□□□□□ -0.71
TREM1-203ENST00000586287 PROM2Q8N271 834 aa10.59□□□□□ -0.71
TREM1-203ENST00000586287 SSH1Q8WYL5 1049 aa10.59□□□□□ -0.71
TREM1-203ENST00000586287 RCAN3Q9UKA8 241 aa10.59□□□□□ -0.71
TREM1-203ENST00000586287 PLSCR1O15162 318 aa10.58□□□□□ -0.72
TREM1-203ENST00000586287 EIF2S2P20042 333 aaKnown RBP10.58□□□□□ -0.72
TREM1-203ENST00000586287 BRPF1P55201 1214 aaPredicted RBP10.58□□□□□ -0.72
TREM1-203ENST00000586287 KCNQ4P56696 695 aa10.58□□□□□ -0.72
TREM1-203ENST00000586287 PDIA6Q15084 440 aa10.58□□□□□ -0.72
TREM1-203ENST00000586287 ALDH1L2Q3SY69 923 aa10.58□□□□□ -0.72
TREM1-203ENST00000586287 HDGFL1Q5TGJ6 251 aa10.58□□□□□ -0.72
TREM1-203ENST00000586287 NECTIN2Q92692 538 aa10.58□□□□□ -0.72
TREM1-203ENST00000586287 C5P01031 1676 aa10.57□□□□□ -0.72
TREM1-203ENST00000586287 APBA3O96018 575 aa10.57□□□□□ -0.72
TREM1-203ENST00000586287 CYP19A1P11511 503 aaPredicted RBP10.57□□□□□ -0.72
TREM1-203ENST00000586287 ATP6V1AP38606 617 aa10.57□□□□□ -0.72
TREM1-203ENST00000586287 CCDC30Q5VVM6 783 aa10.57□□□□□ -0.72
TREM1-203ENST00000586287 LRP10Q7Z4F1 713 aa10.57□□□□□ -0.72
TREM1-203ENST00000586287 MRPL50Q8N5N7 158 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms