RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 ASAP1Q9ULH1 1129 aa13.91□□□□□ -0.18
SMARCA4-209ENST00000586122 COL24A1Q17RW2 1714 aa13.9□□□□□ -0.18
SMARCA4-209ENST00000586122 U2AF1L5P0DN76 240 aaPredicted RBP13.9□□□□□ -0.18
SMARCA4-209ENST00000586122 U2AF1Q01081 240 aaKnown RBP eCLIP13.9□□□□□ -0.18
SMARCA4-209ENST00000586122 PPP1R1BQ9UD71 204 aaPredicted RBP13.9□□□□□ -0.18
SMARCA4-209ENST00000586122 CICQ96RK0 1608 aaPredicted RBP13.9□□□□□ -0.19
SMARCA4-209ENST00000586122 PNPLA7Q6ZV29 1317 aa13.9□□□□□ -0.19
SMARCA4-209ENST00000586122 UBR3Q6ZT12 1888 aa13.89□□□□□ -0.19
SMARCA4-209ENST00000586122 MAP3K5Q99683 1374 aa13.89□□□□□ -0.19
SMARCA4-209ENST00000586122 KCNQ4P56696 695 aa13.89□□□□□ -0.19
SMARCA4-209ENST00000586122 RSPH6AQ9H0K4 717 aa13.89□□□□□ -0.19
SMARCA4-209ENST00000586122 SLC52A2Q9HAB3 445 aa13.89□□□□□ -0.19
SMARCA4-209ENST00000586122 RNMTO43148 476 aaKnown RBP13.88□□□□□ -0.19
SMARCA4-209ENST00000586122 ZBTB7AO95365 584 aa13.88□□□□□ -0.19
SMARCA4-209ENST00000586122 NEFMP07197 916 aa13.88□□□□□ -0.19
SMARCA4-209ENST00000586122 PRKAR2BP31323 418 aa13.88□□□□□ -0.19
SMARCA4-209ENST00000586122 ATP6V1AP38606 617 aa13.88□□□□□ -0.19
SMARCA4-209ENST00000586122 NFATC2IPQ8NCF5 419 aa13.88□□□□□ -0.19
SMARCA4-209ENST00000586122 AK7Q96M32 723 aa13.88□□□□□ -0.19
SMARCA4-209ENST00000586122 PDGFDQ9GZP0 370 aaPredicted RBP13.88□□□□□ -0.19
SMARCA4-209ENST00000586122 COL5A3P25940 1745 aaPredicted RBP13.87□□□□□ -0.19
SMARCA4-209ENST00000586122 GNAT3A8MTJ3 354 aa13.87□□□□□ -0.19
SMARCA4-209ENST00000586122 PNNQ9H307 717 aaKnown RBP13.87□□□□□ -0.19
SMARCA4-209ENST00000586122 MYBBP1AQ9BQG0 1328 aaKnown RBP13.87□□□□□ -0.19
SMARCA4-209ENST00000586122 SSFA2P28290 1259 aa13.86□□□□□ -0.19
SMARCA4-209ENST00000586122 PTGER2P43116 358 aa13.86□□□□□ -0.19
SMARCA4-209ENST00000586122 POLD1P28340 1107 aa13.85□□□□□ -0.19
SMARCA4-209ENST00000586122 SGIP1Q9BQI5 828 aa13.85□□□□□ -0.19
SMARCA4-209ENST00000586122 RBM42Q9BTD8 480 aaKnown RBP13.85□□□□□ -0.19
SMARCA4-209ENST00000586122 LGR6Q9HBX8 967 aa13.85□□□□□ -0.19
SMARCA4-209ENST00000586122 ATF5Q9Y2D1 282 aaPredicted RBP13.85□□□□□ -0.19
SMARCA4-209ENST00000586122 SIPA1L3O60292 1781 aaPredicted RBP13.85□□□□□ -0.19
SMARCA4-209ENST00000586122 CNTNAP4Q9C0A0 1308 aa13.85□□□□□ -0.19
SMARCA4-209ENST00000586122 UBR2Q8IWV8 1755 aa13.84□□□□□ -0.19
SMARCA4-209ENST00000586122 HTATSF1O43719 755 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-209ENST00000586122 TEFQ10587 303 aa13.84□□□□□ -0.19
SMARCA4-209ENST00000586122 ITPK1Q13572 414 aa13.84□□□□□ -0.19
SMARCA4-209ENST00000586122 RC3H1Q5TC82 1133 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-209ENST00000586122 COL23A1Q86Y22 540 aaPredicted RBP13.84□□□□□ -0.19
SMARCA4-209ENST00000586122 LINC00116Q8NCU8 138 aa13.84□□□□□ -0.19
SMARCA4-209ENST00000586122 CEMIPQ8WUJ3 1361 aa13.83□□□□□ -0.19
SMARCA4-209ENST00000586122 ADRA2BP18089 450 aa13.83□□□□□ -0.2
SMARCA4-209ENST00000586122 PHACTR3Q96KR7 559 aa13.83□□□□□ -0.2
SMARCA4-209ENST00000586122 TJP1Q07157 1748 aa13.83□□□□□ -0.2
SMARCA4-209ENST00000586122 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-209ENST00000586122 GNPATO15228 680 aa13.82□□□□□ -0.2
SMARCA4-209ENST00000586122 MSH5O43196 834 aa13.82□□□□□ -0.2
SMARCA4-209ENST00000586122 VSIG10Q8N0Z9 540 aa13.82□□□□□ -0.2
SMARCA4-209ENST00000586122 RTF1Q92541 710 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-209ENST00000586122 SLC4A9Q96Q91 983 aa13.82□□□□□ -0.2
SMARCA4-209ENST00000586122 ARXQ96QS3 562 aa13.82□□□□□ -0.2
SMARCA4-209ENST00000586122 MYH14Q7Z406 1995 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-209ENST00000586122 PTCD1O75127 700 aaKnown RBP13.81□□□□□ -0.2
SMARCA4-209ENST00000586122 TTC5Q8N0Z6 440 aa13.81□□□□□ -0.2
SMARCA4-209ENST00000586122 IL17REQ8NFR9 667 aa13.81□□□□□ -0.2
SMARCA4-209ENST00000586122 PRKRIP1Q9H875 184 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-209ENST00000586122 RTCBQ9Y3I0 505 aaKnown RBP13.81□□□□□ -0.2
SMARCA4-209ENST00000586122 DLG5Q8TDM6 1919 aa13.81□□□□□ -0.2
SMARCA4-209ENST00000586122 KCPQ6ZWJ8 1503 aa13.8□□□□□ -0.2
SMARCA4-209ENST00000586122 MAPK8IP3Q9UPT6 1336 aa13.8□□□□□ -0.2
SMARCA4-209ENST00000586122 ZNF316A6NFI3 1004 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-209ENST00000586122 DCAF8L1A6NGE4 600 aa13.79□□□□□ -0.2
SMARCA4-209ENST00000586122 RPS6KA4O75676 772 aa13.79□□□□□ -0.2
SMARCA4-209ENST00000586122 PHF14O94880 888 aa13.78□□□□□ -0.2
SMARCA4-209ENST00000586122 TRAPPC3LQ5T215 181 aa13.78□□□□□ -0.2
SMARCA4-209ENST00000586122 ZNF790Q6PG37 636 aa13.78□□□□□ -0.2
SMARCA4-209ENST00000586122 PLEKHF1Q96S99 279 aa13.78□□□□□ -0.2
SMARCA4-209ENST00000586122 TEX13AQ9BXU3 409 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-209ENST00000586122 CRKLP46109 303 aaKnown RBP13.77□□□□□ -0.21
SMARCA4-209ENST00000586122 SLC39A6Q13433 755 aa13.77□□□□□ -0.21
SMARCA4-209ENST00000586122 NFE2L2Q16236 605 aa13.77□□□□□ -0.21
SMARCA4-209ENST00000586122 FHDC1Q9C0D6 1143 aaPredicted RBP13.77□□□□□ -0.21
SMARCA4-209ENST00000586122 C4AP0C0L4 1744 aa13.76□□□□□ -0.21
SMARCA4-209ENST00000586122 HEG1Q9ULI3 1381 aa13.76□□□□□ -0.21
SMARCA4-209ENST00000586122 WDR43Q15061 677 aaKnown RBP eCLIP13.76□□□□□ -0.21
SMARCA4-209ENST00000586122 AMIGO3Q86WK7 504 aa13.76□□□□□ -0.21
SMARCA4-209ENST00000586122 DNAJC10Q8IXB1 793 aa13.76□□□□□ -0.21
SMARCA4-209ENST00000586122 FMNL2Q96PY5 1086 aa13.76□□□□□ -0.21
SMARCA4-209ENST00000586122 SYT17Q9BSW7 474 aa13.76□□□□□ -0.21
SMARCA4-209ENST00000586122 CCDC87Q9NVE4 849 aa13.76□□□□□ -0.21
SMARCA4-209ENST00000586122 BTBD11A6QL63 1104 aa13.75□□□□□ -0.21
SMARCA4-209ENST00000586122 STARD3NLO95772 234 aa13.75□□□□□ -0.21
SMARCA4-209ENST00000586122 RFC4P35249 363 aa13.75□□□□□ -0.21
SMARCA4-209ENST00000586122 NLGN1Q8N2Q7 840 aa13.75□□□□□ -0.21
SMARCA4-209ENST00000586122 PNISRQ8TF01 805 aaKnown RBP13.75□□□□□ -0.21
SMARCA4-209ENST00000586122 CYP19A1P11511 503 aaPredicted RBP13.74□□□□□ -0.21
SMARCA4-209ENST00000586122 LMOD3Q0VAK6 560 aa13.74□□□□□ -0.21
SMARCA4-209ENST00000586122 MCM10Q7L590 875 aa13.74□□□□□ -0.21
SMARCA4-209ENST00000586122 ZNF496Q96IT1 587 aaPredicted RBP13.74□□□□□ -0.21
SMARCA4-209ENST00000586122 TAF7Q15545 349 aaPredicted RBP13.73□□□□□ -0.21
SMARCA4-209ENST00000586122 MSL1Q68DK7 614 aa13.73□□□□□ -0.21
SMARCA4-209ENST00000586122 INTS5Q6P9B9 1019 aaKnown RBP13.73□□□□□ -0.21
SMARCA4-209ENST00000586122 ARHGEF1Q92888 912 aaKnown RBP13.73□□□□□ -0.21
SMARCA4-209ENST00000586122 CD2APQ9Y5K6 639 aa13.73□□□□□ -0.21
SMARCA4-209ENST00000586122 SOS1Q07889 1333 aaPredicted RBP13.72□□□□□ -0.21
SMARCA4-209ENST00000586122 KDM3BQ7LBC6 1761 aa13.72□□□□□ -0.21
SMARCA4-209ENST00000586122 USP42Q9H9J4 1324 aaKnown RBP13.71□□□□□ -0.21
SMARCA4-209ENST00000586122 RUNDC1Q96C34 613 aa13.71□□□□□ -0.21
SMARCA4-209ENST00000586122 COL15A1P39059 1388 aa13.71□□□□□ -0.22
SMARCA4-209ENST00000586122 A0A087WZG4 1122 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms