RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 MORC1Q86VD1 984 aa27.6■■■□□ 2.01
CLPTM1-204ENST00000585961 PKD1L3Q7Z443 1732 aa27.59■■■□□ 2.01
CLPTM1-204ENST00000585961 SLC4A9Q96Q91 983 aa27.59■■■□□ 2.01
CLPTM1-204ENST00000585961 TAF1LQ8IZX4 1826 aa27.59■■■□□ 2.01
CLPTM1-204ENST00000585961 IGSF1Q8N6C5 1336 aa27.58■■■□□ 2.01
CLPTM1-204ENST00000585961 ERVV-2B6SEH9 535 aa27.57■■■□□ 2
CLPTM1-204ENST00000585961 TRAPPC3LQ5T215 181 aa27.57■■■□□ 2
CLPTM1-204ENST00000585961 ZNF530Q6P9A1 599 aaPredicted RBP27.57■■■□□ 2
CLPTM1-204ENST00000585961 CCER1Q8TC90 406 aaPredicted RBP27.57■■■□□ 2
CLPTM1-204ENST00000585961 ZNF526Q8TF50 670 aaPredicted RBP27.57■■■□□ 2
CLPTM1-204ENST00000585961 CABP4P57796 275 aa27.56■■■□□ 2
CLPTM1-204ENST00000585961 AEBP1Q8IUX7 1158 aa27.56■■■□□ 2
CLPTM1-204ENST00000585961 MMP10P09238 476 aa27.55■■■□□ 2
CLPTM1-204ENST00000585961 DCAF5Q96JK2 942 aa27.55■■■□□ 2
CLPTM1-204ENST00000585961 RTCBQ9Y3I0 505 aaKnown RBP27.55■■■□□ 2
CLPTM1-204ENST00000585961 HSP90AB1P08238 724 aaKnown RBP27.53■■■□□ 2
CLPTM1-204ENST00000585961 MTHFSP49914 203 aa27.53■■■□□ 2
CLPTM1-204ENST00000585961 PTCD1O75127 700 aaKnown RBP27.52■■■□□ 2
CLPTM1-204ENST00000585961 SULT6B1Q6IMI4 303 aa27.52■■■□□ 2
CLPTM1-204ENST00000585961 ARHGEF1Q92888 912 aaKnown RBP27.52■■■□□ 2
CLPTM1-204ENST00000585961 AMOTQ4VCS5 1084 aa27.51■■□□□ 1.99
CLPTM1-204ENST00000585961 ANKRD26Q9UPS8 1709 aa27.5■■□□□ 1.99
CLPTM1-204ENST00000585961 NFATC2IPQ8NCF5 419 aa27.5■■□□□ 1.99
CLPTM1-204ENST00000585961 KNSTRNQ9Y448 316 aa27.5■■□□□ 1.99
CLPTM1-204ENST00000585961 ATP10DQ9P241 1426 aa27.5■■□□□ 1.99
CLPTM1-204ENST00000585961 UBR3Q6ZT12 1888 aa27.49■■□□□ 1.99
CLPTM1-204ENST00000585961 C1orf141Q5JVX7 400 aa27.49■■□□□ 1.99
CLPTM1-204ENST00000585961 GPBP1L1Q9HC44 474 aaPredicted RBP27.49■■□□□ 1.99
CLPTM1-204ENST00000585961 A0A0G2JLW4 131 aa27.48■■□□□ 1.99
CLPTM1-204ENST00000585961 RFC4P35249 363 aa27.47■■□□□ 1.99
CLPTM1-204ENST00000585961 RC3H1Q5TC82 1133 aaKnown RBP27.47■■□□□ 1.99
CLPTM1-204ENST00000585961 NLGN1Q8N2Q7 840 aa27.47■■□□□ 1.99
CLPTM1-204ENST00000585961 RPS6KA4O75676 772 aa27.46■■□□□ 1.99
CLPTM1-204ENST00000585961 IL13P35225 146 aa27.45■■□□□ 1.98
CLPTM1-204ENST00000585961 KDM6AO15550 1401 aaPredicted RBP27.43■■□□□ 1.98
CLPTM1-204ENST00000585961 GYS1P13807 737 aa27.43■■□□□ 1.98
CLPTM1-204ENST00000585961 BCS1LQ9Y276 419 aa27.43■■□□□ 1.98
CLPTM1-204ENST00000585961 KDRP35968 1356 aa27.43■■□□□ 1.98
CLPTM1-204ENST00000585961 PARP3Q9Y6F1 533 aa27.41■■□□□ 1.98
CLPTM1-204ENST00000585961 CRKLP46109 303 aaKnown RBP27.4■■□□□ 1.98
CLPTM1-204ENST00000585961 TGFB2P61812 414 aa27.4■■□□□ 1.98
CLPTM1-204ENST00000585961 LGR6Q9HBX8 967 aa27.4■■□□□ 1.98
CLPTM1-204ENST00000585961 SRP68Q9UHB9 627 aaKnown RBP27.4■■□□□ 1.98
CLPTM1-204ENST00000585961 CNTNAP4Q9C0A0 1308 aa27.4■■□□□ 1.98
CLPTM1-204ENST00000585961 DPEP1P16444 411 aa27.39■■□□□ 1.98
CLPTM1-204ENST00000585961 ADRA2BP18089 450 aa27.39■■□□□ 1.98
CLPTM1-204ENST00000585961 CNGB1Q14028 1251 aaPredicted RBP27.39■■□□□ 1.98
CLPTM1-204ENST00000585961 ARHGAP27Q6ZUM4 889 aa27.39■■□□□ 1.98
CLPTM1-204ENST00000585961 HMOX1P09601 288 aa27.38■■□□□ 1.97
CLPTM1-204ENST00000585961 AMER1Q5JTC6 1135 aaPredicted RBP27.38■■□□□ 1.97
CLPTM1-204ENST00000585961 CCDC87Q9NVE4 849 aa27.38■■□□□ 1.97
CLPTM1-204ENST00000585961 PLEKHG2Q9H7P9 1386 aa27.35■■□□□ 1.97
CLPTM1-204ENST00000585961 FCHSD2O94868 740 aa27.35■■□□□ 1.97
CLPTM1-204ENST00000585961 FKBP8Q14318 412 aa27.35■■□□□ 1.97
CLPTM1-204ENST00000585961 ADCY9O60503 1353 aa27.35■■□□□ 1.97
CLPTM1-204ENST00000585961 CEP350Q5VT06 3117 aa27.34■■□□□ 1.97
CLPTM1-204ENST00000585961 SLC39A6Q13433 755 aa27.34■■□□□ 1.97
CLPTM1-204ENST00000585961 AKAP4Q5JQC9 854 aa27.34■■□□□ 1.97
CLPTM1-204ENST00000585961 INTS5Q6P9B9 1019 aaKnown RBP27.34■■□□□ 1.97
CLPTM1-204ENST00000585961 PXDNLA1KZ92 1463 aa27.33■■□□□ 1.97
CLPTM1-204ENST00000585961 CC2D1BQ5T0F9 858 aaKnown RBP27.33■■□□□ 1.97
CLPTM1-204ENST00000585961 DNAJC10Q8IXB1 793 aa27.33■■□□□ 1.97
CLPTM1-204ENST00000585961 KIF7Q2M1P5 1343 aa27.32■■□□□ 1.96
CLPTM1-204ENST00000585961 CICQ96RK0 1608 aaPredicted RBP27.31■■□□□ 1.96
CLPTM1-204ENST00000585961 KCNA3P22001 575 aa27.31■■□□□ 1.96
CLPTM1-204ENST00000585961 SLC52A2Q9HAB3 445 aa27.31■■□□□ 1.96
CLPTM1-204ENST00000585961 RNMTO43148 476 aaKnown RBP27.3■■□□□ 1.96
CLPTM1-204ENST00000585961 MYH14Q7Z406 1995 aaKnown RBP27.28■■□□□ 1.96
CLPTM1-204ENST00000585961 KIF3CO14782 793 aa27.28■■□□□ 1.96
CLPTM1-204ENST00000585961 DDR1Q08345 913 aa27.28■■□□□ 1.96
CLPTM1-204ENST00000585961 MTHFSDQ2M296 383 aaKnown RBP27.28■■□□□ 1.96
CLPTM1-204ENST00000585961 HSPA6P17066 643 aa27.27■■□□□ 1.96
CLPTM1-204ENST00000585961 C10orf71Q711Q0 1435 aa27.26■■□□□ 1.95
CLPTM1-204ENST00000585961 USP42Q9H9J4 1324 aaKnown RBP27.26■■□□□ 1.95
CLPTM1-204ENST00000585961 PER1O15534 1290 aaPredicted RBP27.26■■□□□ 1.95
CLPTM1-204ENST00000585961 ZPR1O75312 459 aa27.26■■□□□ 1.95
CLPTM1-204ENST00000585961 USPL1Q5W0Q7 1092 aa27.26■■□□□ 1.95
CLPTM1-204ENST00000585961 N4BP2Q86UW6 1770 aaPredicted RBP27.26■■□□□ 1.95
CLPTM1-204ENST00000585961 DIAPH1O60610 1272 aaKnown RBP27.25■■□□□ 1.95
CLPTM1-204ENST00000585961 CHRNA5P30532 468 aa27.25■■□□□ 1.95
CLPTM1-204ENST00000585961 PIM2Q9P1W9 311 aa27.25■■□□□ 1.95
CLPTM1-204ENST00000585961 CYP19A1P11511 503 aaPredicted RBP27.24■■□□□ 1.95
CLPTM1-204ENST00000585961 TM4SF1P30408 202 aa27.24■■□□□ 1.95
CLPTM1-204ENST00000585961 C9orf131Q5VYM1 1079 aa27.22■■□□□ 1.95
CLPTM1-204ENST00000585961 POLRMTO00411 1230 aaKnown RBP27.21■■□□□ 1.95
CLPTM1-204ENST00000585961 DALRD3Q5D0E6 543 aaKnown RBP27.21■■□□□ 1.95
CLPTM1-204ENST00000585961 COL5A3P25940 1745 aaPredicted RBP27.21■■□□□ 1.95
CLPTM1-204ENST00000585961 NMRK2Q9NPI5 230 aa27.2■■□□□ 1.94
CLPTM1-204ENST00000585961 ZNF831Q5JPB2 1677 aa27.2■■□□□ 1.94
CLPTM1-204ENST00000585961 C4AP0C0L4 1744 aa27.19■■□□□ 1.94
CLPTM1-204ENST00000585961 U2SURPO15042 1029 aaKnown RBP27.19■■□□□ 1.94
CLPTM1-204ENST00000585961 SOS1Q07889 1333 aaPredicted RBP27.18■■□□□ 1.94
CLPTM1-204ENST00000585961 CANXP27824 592 aaKnown RBP27.18■■□□□ 1.94
CLPTM1-204ENST00000585961 ZBTB1Q9Y2K1 713 aa27.18■■□□□ 1.94
CLPTM1-204ENST00000585961 NFIXQ14938 502 aa27.16■■□□□ 1.94
CLPTM1-204ENST00000585961 KIF13BQ9NQT8 1826 aa27.16■■□□□ 1.94
CLPTM1-204ENST00000585961 KIAA1551Q9HCM1 1747 aa27.16■■□□□ 1.94
CLPTM1-204ENST00000585961 NARFQ9UHQ1 456 aa27.15■■□□□ 1.94
CLPTM1-204ENST00000585961 BICDL1Q6ZP65 573 aa27.14■■□□□ 1.94
CLPTM1-204ENST00000585961 TOMM70O94826 608 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms