RNA–Protein interactions for RNA: ENST00000585913.5

CIRBP-205, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-205ENST00000585913 FLAD1Q8NFF5 587 aa29.23■■■□□ 2.27
CIRBP-205ENST00000585913 SYT17Q9BSW7 474 aa29.22■■■□□ 2.27
CIRBP-205ENST00000585913 ATP6V1AP38606 617 aa29.21■■■□□ 2.27
CIRBP-205ENST00000585913 COL3A1P02461 1466 aaPredicted RBP29.21■■■□□ 2.27
CIRBP-205ENST00000585913 LINC00116Q8NCU8 138 aa29.2■■■□□ 2.26
CIRBP-205ENST00000585913 UBR3Q6ZT12 1888 aa29.19■■■□□ 2.26
CIRBP-205ENST00000585913 AKAP4Q5JQC9 854 aa29.19■■■□□ 2.26
CIRBP-205ENST00000585913 SCN11AQ9UI33 1791 aa29.18■■■□□ 2.26
CIRBP-205ENST00000585913 MAP3K5Q99683 1374 aa29.17■■■□□ 2.26
CIRBP-205ENST00000585913 ITPK1Q13572 414 aa29.17■■■□□ 2.26
CIRBP-205ENST00000585913 RBM42Q9BTD8 480 aaKnown RBP29.17■■■□□ 2.26
CIRBP-205ENST00000585913 ZNF831Q5JPB2 1677 aa29.16■■■□□ 2.26
CIRBP-205ENST00000585913 U2SURPO15042 1029 aaKnown RBP29.16■■■□□ 2.26
CIRBP-205ENST00000585913 KLHL34Q8N239 644 aa29.16■■■□□ 2.26
CIRBP-205ENST00000585913 PHF14O94880 888 aa29.15■■■□□ 2.26
CIRBP-205ENST00000585913 MSL1Q68DK7 614 aa29.15■■■□□ 2.26
CIRBP-205ENST00000585913 CFAP53Q96M91 514 aa29.15■■■□□ 2.26
CIRBP-205ENST00000585913 NFATC2IPQ8NCF5 419 aa29.14■■■□□ 2.26
CIRBP-205ENST00000585913 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.13■■■□□ 2.25
CIRBP-205ENST00000585913 SSFA2P28290 1259 aa29.13■■■□□ 2.25
CIRBP-205ENST00000585913 AMIGO3Q86WK7 504 aa29.13■■■□□ 2.25
CIRBP-205ENST00000585913 GNPATO15228 680 aa29.12■■■□□ 2.25
CIRBP-205ENST00000585913 VIRMAQ69YN4 1812 aaKnown RBP29.11■■■□□ 2.25
CIRBP-205ENST00000585913 MTHFSDQ2M296 383 aaKnown RBP29.11■■■□□ 2.25
CIRBP-205ENST00000585913 SMIM5Q71RC9 77 aa29.1■■■□□ 2.25
CIRBP-205ENST00000585913 SLC4A9Q96Q91 983 aa29.1■■■□□ 2.25
CIRBP-205ENST00000585913 COL5A3P25940 1745 aaPredicted RBP29.09■■■□□ 2.25
CIRBP-205ENST00000585913 PTCD1O75127 700 aaKnown RBP29.08■■■□□ 2.25
CIRBP-205ENST00000585913 PPP2R1AP30153 589 aa29.08■■■□□ 2.25
CIRBP-205ENST00000585913 LGR6Q9HBX8 967 aa29.08■■■□□ 2.25
CIRBP-205ENST00000585913 RNMTO43148 476 aaKnown RBP29.07■■■□□ 2.24
CIRBP-205ENST00000585913 MRC1P22897 1456 aa29.07■■■□□ 2.24
CIRBP-205ENST00000585913 SLC52A2Q9HAB3 445 aa29.07■■■□□ 2.24
CIRBP-205ENST00000585913 ADAMTS7Q9UKP4 1686 aa29.05■■■□□ 2.24
CIRBP-205ENST00000585913 NUDCQ9Y266 331 aa29.05■■■□□ 2.24
CIRBP-205ENST00000585913 RTCBQ9Y3I0 505 aaKnown RBP29.05■■■□□ 2.24
CIRBP-205ENST00000585913 CNTNAP4Q9C0A0 1308 aa29.04■■■□□ 2.24
CIRBP-205ENST00000585913 RC3H1Q5TC82 1133 aaKnown RBP29.04■■■□□ 2.24
CIRBP-205ENST00000585913 GAS2L2Q8NHY3 880 aa29.03■■■□□ 2.24
CIRBP-205ENST00000585913 CICQ96RK0 1608 aaPredicted RBP29.02■■■□□ 2.24
CIRBP-205ENST00000585913 TJP1Q07157 1748 aa29.01■■■□□ 2.23
CIRBP-205ENST00000585913 TRAPPC3LQ5T215 181 aa29■■■□□ 2.23
CIRBP-205ENST00000585913 NLGN2Q8NFZ4 835 aa29■■■□□ 2.23
CIRBP-205ENST00000585913 PRKAR2BP31323 418 aa28.99■■■□□ 2.23
CIRBP-205ENST00000585913 GNAT3A8MTJ3 354 aa28.98■■■□□ 2.23
CIRBP-205ENST00000585913 U2AF1L5P0DN76 240 aaPredicted RBP28.98■■■□□ 2.23
CIRBP-205ENST00000585913 ADRA2BP18089 450 aa28.98■■■□□ 2.23
CIRBP-205ENST00000585913 U2AF1Q01081 240 aaKnown RBP eCLIP28.98■■■□□ 2.237e-7■■■■□ 23.3
CIRBP-205ENST00000585913 GPR162Q16538 588 aa28.98■■■□□ 2.23
CIRBP-205ENST00000585913 RSPH6AQ9H0K4 717 aa28.98■■■□□ 2.23
CIRBP-205ENST00000585913 MYH14Q7Z406 1995 aaKnown RBP28.97■■■□□ 2.23
CIRBP-205ENST00000585913 RPS6KA4O75676 772 aa28.97■■■□□ 2.23
CIRBP-205ENST00000585913 SLC39A6Q13433 755 aa28.97■■■□□ 2.23
CIRBP-205ENST00000585913 CRKLP46109 303 aaKnown RBP28.96■■■□□ 2.23
CIRBP-205ENST00000585913 PELP1Q8IZL8 1130 aaKnown RBP28.96■■■□□ 2.23
CIRBP-205ENST00000585913 ZNF784Q8NCA9 323 aaPredicted RBP28.95■■■□□ 2.22
CIRBP-205ENST00000585913 CD2APQ9Y5K6 639 aa28.95■■■□□ 2.22
CIRBP-205ENST00000585913 RFC4P35249 363 aa28.94■■■□□ 2.22
CIRBP-205ENST00000585913 TEFQ10587 303 aa28.94■■■□□ 2.22
CIRBP-205ENST00000585913 ARHGEF1Q92888 912 aaKnown RBP28.94■■■□□ 2.22
CIRBP-205ENST00000585913 KCPQ6ZWJ8 1503 aa28.94■■■□□ 2.22
CIRBP-205ENST00000585913 PHACTR3Q96KR7 559 aa28.93■■■□□ 2.22
CIRBP-205ENST00000585913 C4AP0C0L4 1744 aa28.93■■■□□ 2.22
CIRBP-205ENST00000585913 DNAJC10Q8IXB1 793 aa28.92■■■□□ 2.22
CIRBP-205ENST00000585913 UBR2Q8IWV8 1755 aa28.91■■■□□ 2.22
CIRBP-205ENST00000585913 TTC5Q8N0Z6 440 aa28.91■■■□□ 2.22
CIRBP-205ENST00000585913 IL17REQ8NFR9 667 aa28.91■■■□□ 2.22
CIRBP-205ENST00000585913 FCHSD2O94868 740 aa28.9■■■□□ 2.22
CIRBP-205ENST00000585913 NLGN1Q8N2Q7 840 aa28.9■■■□□ 2.22
CIRBP-205ENST00000585913 UTRNP46939 3433 aa28.9■■■□□ 2.22
CIRBP-205ENST00000585913 CHD4Q14839 1912 aa28.9■■■□□ 2.22
CIRBP-205ENST00000585913 SIPA1L3O60292 1781 aaPredicted RBP28.9■■■□□ 2.22
CIRBP-205ENST00000585913 MMP10P09238 476 aa28.89■■■□□ 2.22
CIRBP-205ENST00000585913 CCDC87Q9NVE4 849 aa28.88■■■□□ 2.21
CIRBP-205ENST00000585913 INTS5Q6P9B9 1019 aaKnown RBP28.87■■■□□ 2.21
CIRBP-205ENST00000585913 VSIG10Q8N0Z9 540 aa28.87■■■□□ 2.21
CIRBP-205ENST00000585913 GYS1P13807 737 aa28.86■■■□□ 2.21
CIRBP-205ENST00000585913 CEMIPQ8WUJ3 1361 aa28.86■■■□□ 2.21
CIRBP-205ENST00000585913 CYP19A1P11511 503 aaPredicted RBP28.85■■■□□ 2.21
CIRBP-205ENST00000585913 DDX10Q13206 875 aaKnown RBP28.84■■■□□ 2.21
CIRBP-205ENST00000585913 ZNF790Q6PG37 636 aa28.83■■■□□ 2.21
CIRBP-205ENST00000585913 RTF1Q92541 710 aaKnown RBP28.83■■■□□ 2.21
CIRBP-205ENST00000585913 NEFMP07197 916 aa28.82■■■□□ 2.2
CIRBP-205ENST00000585913 YBX3P16989 372 aaKnown RBP eCLIP28.82■■■□□ 2.2
CIRBP-205ENST00000585913 SRP68Q9UHB9 627 aaKnown RBP28.82■■■□□ 2.2
CIRBP-205ENST00000585913 USP42Q9H9J4 1324 aaKnown RBP28.82■■■□□ 2.2
CIRBP-205ENST00000585913 SOS1Q07889 1333 aaPredicted RBP28.81■■■□□ 2.2
CIRBP-205ENST00000585913 GRIN3BO60391 1043 aa28.81■■■□□ 2.2
CIRBP-205ENST00000585913 RALBP1Q15311 655 aa28.81■■■□□ 2.2
CIRBP-205ENST00000585913 GOLGB1Q14789 3259 aaKnown RBP28.8■■■□□ 2.2
CIRBP-205ENST00000585913 HEG1Q9ULI3 1381 aa28.8■■■□□ 2.2
CIRBP-205ENST00000585913 ZNF496Q96IT1 587 aaPredicted RBP28.8■■■□□ 2.2
CIRBP-205ENST00000585913 PARP3Q9Y6F1 533 aa28.8■■■□□ 2.2
CIRBP-205ENST00000585913 BTBD11A6QL63 1104 aa28.79■■■□□ 2.2
CIRBP-205ENST00000585913 STARD3NLO95772 234 aa28.79■■■□□ 2.2
CIRBP-205ENST00000585913 ZBTB1Q9Y2K1 713 aa28.79■■■□□ 2.2
CIRBP-205ENST00000585913 KIF13BQ9NQT8 1826 aa28.78■■■□□ 2.2
CIRBP-205ENST00000585913 ZPR1O75312 459 aa28.78■■■□□ 2.2
CIRBP-205ENST00000585913 FMNL2Q96PY5 1086 aa28.78■■■□□ 2.2
CIRBP-205ENST00000585913 COL15A1P39059 1388 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms