RNA–Protein interactions for RNA: ENST00000585879.1

RPRD1A-203, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 425 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-203ENST00000585879 IL27Q8NEV9 243 aa10.09□□□□□ -0.79
RPRD1A-203ENST00000585879 SNRPNP63162 240 aaKnown RBP10.08□□□□□ -0.8
RPRD1A-203ENST00000585879 XAGE2Q96GT9 111 aa10.08□□□□□ -0.8
RPRD1A-203ENST00000585879 FHDC1Q9C0D6 1143 aaPredicted RBP10.08□□□□□ -0.8
RPRD1A-203ENST00000585879 ESF1Q9H501 851 aaKnown RBP10.08□□□□□ -0.8
RPRD1A-203ENST00000585879 NDUFB9Q9Y6M9 179 aa10.08□□□□□ -0.8
RPRD1A-203ENST00000585879 A0A1B0GTH6 734 aa10.07□□□□□ -0.8
RPRD1A-203ENST00000585879 C1orf229Q6ZS94 237 aaPredicted RBP10.07□□□□□ -0.8
RPRD1A-203ENST00000585879 BCANQ96GW7 911 aa10.07□□□□□ -0.8
RPRD1A-203ENST00000585879 CCDC85AQ96PX6 553 aaPredicted RBP10.07□□□□□ -0.8
RPRD1A-203ENST00000585879 CDCA7Q9BWT1 371 aaPredicted RBP10.07□□□□□ -0.8
RPRD1A-203ENST00000585879 SHISA8B8ZZ34 492 aa10.06□□□□□ -0.8
RPRD1A-203ENST00000585879 LBRQ14739 615 aaKnown RBP10.06□□□□□ -0.8
RPRD1A-203ENST00000585879 KLRG1Q96E93 195 aa10.06□□□□□ -0.8
RPRD1A-203ENST00000585879 ZSCAN10Q96SZ4 725 aaPredicted RBP10.06□□□□□ -0.8
RPRD1A-203ENST00000585879 GPAMQ9HCL2 828 aa10.06□□□□□ -0.8
RPRD1A-203ENST00000585879 CEP126Q9P2H0 1117 aa10.06□□□□□ -0.8
RPRD1A-203ENST00000585879 PHKA2P46019 1235 aa10.05□□□□□ -0.8
RPRD1A-203ENST00000585879 NEUROD2Q15784 382 aa10.05□□□□□ -0.8
RPRD1A-203ENST00000585879 PHF24Q9UPV7 400 aa10.05□□□□□ -0.8
RPRD1A-203ENST00000585879 C4orf17Q53FE4 359 aa10.04□□□□□ -0.8
RPRD1A-203ENST00000585879 GALNT6Q8NCL4 622 aa10.04□□□□□ -0.8
RPRD1A-203ENST00000585879 KRBA1A5PL33 1030 aa10.03□□□□□ -0.8
RPRD1A-203ENST00000585879 MYCP01106 439 aaPredicted RBP10.03□□□□□ -0.8
RPRD1A-203ENST00000585879 SNRKQ9NRH2 765 aa10.03□□□□□ -0.8
RPRD1A-203ENST00000585879 GDF2Q9UK05 429 aaPredicted RBP10.03□□□□□ -0.8
RPRD1A-203ENST00000585879 MKL2Q9ULH7 1088 aa10.02□□□□□ -0.81
RPRD1A-203ENST00000585879 HOXB4P17483 251 aaPredicted RBP10.01□□□□□ -0.81
RPRD1A-203ENST00000585879 GNASQ5JWF2 1037 aa10.01□□□□□ -0.81
RPRD1A-203ENST00000585879 EDARADDQ8WWZ3 215 aa10.01□□□□□ -0.81
RPRD1A-203ENST00000585879 RUBCNLQ9H714 662 aa10.01□□□□□ -0.81
RPRD1A-203ENST00000585879 NDFIP2Q9NV92 336 aa10.01□□□□□ -0.81
RPRD1A-203ENST00000585879 C2CD2LO14523 706 aa10□□□□□ -0.81
RPRD1A-203ENST00000585879 COL8A1P27658 744 aa10□□□□□ -0.81
RPRD1A-203ENST00000585879 MSX1P28360 303 aa10□□□□□ -0.81
RPRD1A-203ENST00000585879 XP32Q5T750 250 aa10□□□□□ -0.81
RPRD1A-203ENST00000585879 TMEM214Q6NUQ4 689 aaKnown RBP10□□□□□ -0.81
RPRD1A-203ENST00000585879 ALYREFQ86V81 257 aaKnown RBP10□□□□□ -0.81
RPRD1A-203ENST00000585879 PHTF2Q8N3S3 785 aa10□□□□□ -0.81
RPRD1A-203ENST00000585879 GOLGA6L1Q8N7Z2 621 aa10□□□□□ -0.81
RPRD1A-203ENST00000585879 ATXN7L1Q9ULK2 861 aaPredicted RBP10□□□□□ -0.81
RPRD1A-203ENST00000585879 APBB1O00213 710 aa9.99□□□□□ -0.81
RPRD1A-203ENST00000585879 TSGA10IPQ3SY00 556 aa9.99□□□□□ -0.81
RPRD1A-203ENST00000585879 ESCO1Q5FWF5 840 aa9.99□□□□□ -0.81
RPRD1A-203ENST00000585879 CSB-PGBD3P0DP91 1061 aa9.98□□□□□ -0.81
RPRD1A-203ENST00000585879 PPARGC1BQ86YN6 1023 aaKnown RBP9.98□□□□□ -0.81
RPRD1A-203ENST00000585879 PGBD3Q8N328 593 aa9.98□□□□□ -0.81
RPRD1A-203ENST00000585879 RHBDD1Q8TEB9 315 aa9.98□□□□□ -0.81
RPRD1A-203ENST00000585879 CRISPLD1Q9H336 500 aa9.98□□□□□ -0.81
RPRD1A-203ENST00000585879 ETNK1Q9HBU6 452 aa9.98□□□□□ -0.81
RPRD1A-203ENST00000585879 GTF2E1P29083 439 aaPredicted RBP9.97□□□□□ -0.81
RPRD1A-203ENST00000585879 EFHC2Q5JST6 749 aa9.97□□□□□ -0.81
RPRD1A-203ENST00000585879 LINC00114Q6XXX2 140 aa9.97□□□□□ -0.81
RPRD1A-203ENST00000585879 SLCO4C1Q6ZQN7 724 aa9.97□□□□□ -0.81
RPRD1A-203ENST00000585879 BNIP3LO60238 219 aa9.96□□□□□ -0.82
RPRD1A-203ENST00000585879 STAU1O95793 577 aaKnown RBP9.96□□□□□ -0.82
RPRD1A-203ENST00000585879 BMP4P12644 408 aa9.96□□□□□ -0.82
RPRD1A-203ENST00000585879 FGFR3P22607 806 aa9.96□□□□□ -0.82
RPRD1A-203ENST00000585879 BAG6P46379 1132 aa9.96□□□□□ -0.82
RPRD1A-203ENST00000585879 BRPF1P55201 1214 aaPredicted RBP9.96□□□□□ -0.82
RPRD1A-203ENST00000585879 ABHD17AQ96GS6 310 aa9.96□□□□□ -0.82
RPRD1A-203ENST00000585879 CHIC2Q9UKJ5 165 aa9.96□□□□□ -0.82
RPRD1A-203ENST00000585879 K7ELQ4 463 aaPredicted RBP9.95□□□□□ -0.82
RPRD1A-203ENST00000585879 CTBSQ01459 385 aa9.95□□□□□ -0.82
RPRD1A-203ENST00000585879 USP4Q13107 963 aa9.95□□□□□ -0.82
RPRD1A-203ENST00000585879 RRAGCQ9HB90 399 aa9.95□□□□□ -0.82
RPRD1A-203ENST00000585879 GGA1Q9UJY5 639 aa9.95□□□□□ -0.82
RPRD1A-203ENST00000585879 DNAAF2Q9NVR5 837 aaKnown RBP9.94□□□□□ -0.82
RPRD1A-203ENST00000585879 DOLKQ9UPQ8 538 aa9.94□□□□□ -0.82
RPRD1A-203ENST00000585879 TLR1Q15399 786 aa9.93□□□□□ -0.82
RPRD1A-203ENST00000585879 SUV39H2Q9H5I1 410 aa9.93□□□□□ -0.82
RPRD1A-203ENST00000585879 TBC1D2BQ9UPU7 963 aa9.93□□□□□ -0.82
RPRD1A-203ENST00000585879 IRF5Q13568 498 aa9.92□□□□□ -0.82
RPRD1A-203ENST00000585879 ARAFP10398 606 aa9.91□□□□□ -0.82
RPRD1A-203ENST00000585879 EPXP11678 715 aa9.91□□□□□ -0.82
RPRD1A-203ENST00000585879 SCNN1DP51172 638 aa9.91□□□□□ -0.82
RPRD1A-203ENST00000585879 EIF4G2P78344 907 aaKnown RBP eCLIP9.91□□□□□ -0.82
RPRD1A-203ENST00000585879 BTBD6Q96KE9 485 aa9.91□□□□□ -0.82
RPRD1A-203ENST00000585879 ATP4AP20648 1035 aa9.9□□□□□ -0.82
RPRD1A-203ENST00000585879 PLA2G4AP47712 749 aa9.9□□□□□ -0.82
RPRD1A-203ENST00000585879 GRIN2CQ14957 1233 aa9.9□□□□□ -0.82
RPRD1A-203ENST00000585879 SLFNL1Q499Z3 407 aa9.9□□□□□ -0.82
RPRD1A-203ENST00000585879 FIGNL1Q6PIW4 674 aa9.9□□□□□ -0.82
RPRD1A-203ENST00000585879 RNF135Q8IUD6 432 aa9.9□□□□□ -0.82
RPRD1A-203ENST00000585879 ZCCHC2Q9C0B9 1178 aaKnown RBP9.9□□□□□ -0.82
RPRD1A-203ENST00000585879 HCN2Q9UL51 889 aa9.9□□□□□ -0.82
RPRD1A-203ENST00000585879 GNB5O14775 395 aa9.89□□□□□ -0.83
RPRD1A-203ENST00000585879 INHAP05111 366 aa9.89□□□□□ -0.83
RPRD1A-203ENST00000585879 AMPD1P23109 780 aa9.89□□□□□ -0.83
RPRD1A-203ENST00000585879 DGKGP49619 791 aa9.89□□□□□ -0.83
RPRD1A-203ENST00000585879 TBC1D9Q6ZT07 1266 aa9.89□□□□□ -0.83
RPRD1A-203ENST00000585879 C1orf216Q8TAB5 229 aa9.89□□□□□ -0.83
RPRD1A-203ENST00000585879 PCDHGC4Q9Y5F7 938 aa9.89□□□□□ -0.83
RPRD1A-203ENST00000585879 OXLD1Q5BKU9 147 aa9.88□□□□□ -0.83
RPRD1A-203ENST00000585879 NLRP8Q86W28 1048 aa9.88□□□□□ -0.83
RPRD1A-203ENST00000585879 SIRT1Q96EB6 747 aa9.88□□□□□ -0.83
RPRD1A-203ENST00000585879 PIK3R2O00459 728 aa9.87□□□□□ -0.83
RPRD1A-203ENST00000585879 FURINP09958 794 aa9.87□□□□□ -0.83
RPRD1A-203ENST00000585879 GDF10P55107 478 aa9.87□□□□□ -0.83
RPRD1A-203ENST00000585879 ZNF295-AS1Q8N0V1 137 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms