RNA–Protein interactions for RNA: ENST00000585594.5

NEDD4L-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-212ENST00000585594 RUNDC1Q96C34 613 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 CHMP4CQ96CF2 233 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 DDX27Q96GQ7 796 aaKnown RBP2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 MPP4Q96JB8 637 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 CEP89Q96ST8 783 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 MPHOSPH6Q99547 160 aaKnown RBP2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 NCAPGQ9BPX3 1015 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 POLR3CQ9BUI4 534 aaPredicted RBP2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 BRINP2Q9C0B6 783 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 VRTNQ9H8Y1 702 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 GOPCQ9HD26 462 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 PCDH12Q9NPG4 1184 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 RYDENQ9NUL5 291 aaKnown RBP2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 CUEDC1Q9NWM3 386 aaPredicted RBP2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 CHCHD3Q9NX63 227 aaKnown RBP2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 DDX56Q9NY93 547 aaKnown RBP2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 TMEM63CQ9P1W3 806 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 SUN2Q9UH99 717 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 TMCC3Q9ULS5 477 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 PHF8Q9UPP1 1060 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 TBC1D2BQ9UPU7 963 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 COG6Q9Y2V7 657 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 KNSTRNQ9Y448 316 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 TBX22Q9Y458 520 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 RAD54L2Q9Y4B4 1467 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 LOC100996750A0A140TA64 210 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 TRIM64CA6NLI5 447 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 LDHAP00338 332 aaKnown RBP2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 FOSP01100 380 aaPredicted RBP2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 FGAP02671 866 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 FAM163BP0C2L3 166 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 TGFB3P10600 412 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 LMNB1P20700 586 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 RFX1P22670 979 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 RRM1P23921 792 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 GTF2F1P35269 517 aaKnown RBP eCLIP2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 PDE6BP35913 854 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 ABL2P42684 1182 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 CLK1P49759 484 aaKnown RBP2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 ZNF131P52739 623 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 SH3BGRP55822 239 aaPredicted RBP2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 MARSP56192 900 aaKnown RBP2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 IRX5P78411 483 aaPredicted RBP2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 WASHC5Q12768 1159 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 TRIM29Q14134 588 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 DCTN1Q14203 1278 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 GSE1Q14687 1217 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 BMS1Q14692 1282 aaKnown RBP2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 COL19A1Q14993 1142 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 MAPRE1Q15691 268 aaKnown RBP2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 LONRF1Q17RB8 773 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 TSNAXIP1Q2TAA8 658 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 ALDH1L2Q3SY69 923 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 MAP9Q49MG5 647 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 CT47A1Q5JQC4 288 aaPredicted RBP2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 TTC39BQ5VTQ0 682 aaPredicted RBP2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 CTR9Q6PD62 1173 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 FILIP1Q7Z7B0 1213 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 NPAS4Q8IUM7 802 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 SLF2Q8IX21 1173 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 NDUFAF2Q8N183 169 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 STK11IPQ8N1F8 1099 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 CCDC89Q8N998 374 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 PRPF38AQ8NAV1 312 aaKnown RBP2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 KLHL23Q8NBE8 558 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 NGDNQ8NEJ9 315 aaKnown RBP2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 SVIPQ8NHG7 77 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 ATRIPQ8WXE1 791 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 GOLGA1Q92805 767 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 SYAP1Q96A49 352 aaPredicted RBP2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 RNF25Q96BH1 459 aaPredicted RBP2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 FMNL2Q96PY5 1086 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 KRTAP4-6Q9BYQ5 205 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 MUC3BQ9H195 1237 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 ALDH8A1Q9H2A2 487 aaPredicted RBP2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 ZSWIM4Q9H7M6 989 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 DONSONQ9NYP3 566 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 MKRN1Q9UHC7 482 aaKnown RBP2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 ACAD8Q9UKU7 415 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 RABL2BQ9UNT1 228 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 IQSEC3Q9UPP2 1182 aaPredicted RBP2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 GNEQ9Y223 722 aaKnown RBP2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 LZTS1Q9Y250 596 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 ZNF652Q9Y2D9 606 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 THRAP3Q9Y2W1 955 aaKnown RBP2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 PAXBP1Q9Y5B6 917 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 KIF16BQ96L93 1317 aa2.1□□□□□ -2.07
NEDD4L-212ENST00000585594 TMCO5BA8MYB1 307 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 PLIN1O60240 522 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 TPPPO94811 219 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 RECKO95980 971 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 CCDC159P0C7I6 412 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 RBP3P10745 1247 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 ATP2B1P20020 1258 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 VAMP1P23763 118 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 CLCN1P35523 988 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 TRPC1P48995 793 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 MNX1P50219 401 aaPredicted RBP2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 ZNF132P52740 706 aa2.09□□□□□ -2.07
NEDD4L-212ENST00000585594 SEPT2Q15019 361 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms