RNA–Protein interactions for RNA: ENST00000585325.5

PRKCSH-201, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-201ENST00000585325 LOC102724428A0A0B4J2F2 783 aa18.22■□□□□ 0.51
PRKCSH-201ENST00000585325 SIK1P57059 783 aa18.22■□□□□ 0.51
PRKCSH-201ENST00000585325 AEBP1Q8IUX7 1158 aa18.22■□□□□ 0.51
PRKCSH-201ENST00000585325 HSP90AB1P08238 724 aaKnown RBP18.21■□□□□ 0.51
PRKCSH-201ENST00000585325 AMOTQ4VCS5 1084 aa18.21■□□□□ 0.51
PRKCSH-201ENST00000585325 SULT6B1Q6IMI4 303 aa18.21■□□□□ 0.51
PRKCSH-201ENST00000585325 ZNF530Q6P9A1 599 aaPredicted RBP18.21■□□□□ 0.51
PRKCSH-201ENST00000585325 ADCY9O60503 1353 aa18.2■□□□□ 0.5
PRKCSH-201ENST00000585325 PHF14O94880 888 aa18.2■□□□□ 0.5
PRKCSH-201ENST00000585325 ATP6V1AP38606 617 aa18.2■□□□□ 0.5
PRKCSH-201ENST00000585325 ZNF526Q8TF50 670 aaPredicted RBP18.2■□□□□ 0.5
PRKCSH-201ENST00000585325 DCAF5Q96JK2 942 aa18.2■□□□□ 0.5
PRKCSH-201ENST00000585325 ATG3Q9NT62 314 aa18.2■□□□□ 0.5
PRKCSH-201ENST00000585325 UBR3Q6ZT12 1888 aa18.2■□□□□ 0.5
PRKCSH-201ENST00000585325 IL13P35225 146 aa18.19■□□□□ 0.5
PRKCSH-201ENST00000585325 C1orf141Q5JVX7 400 aa18.19■□□□□ 0.5
PRKCSH-201ENST00000585325 CC2D1BQ5T0F9 858 aaKnown RBP18.19■□□□□ 0.5
PRKCSH-201ENST00000585325 LINC00116Q8NCU8 138 aa18.19■□□□□ 0.5
PRKCSH-201ENST00000585325 ERVV-2B6SEH9 535 aa18.18■□□□□ 0.5
PRKCSH-201ENST00000585325 SMIM5Q71RC9 77 aa18.18■□□□□ 0.5
PRKCSH-201ENST00000585325 KDM6AO15550 1401 aaPredicted RBP18.17■□□□□ 0.5
PRKCSH-201ENST00000585325 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.17■□□□□ 0.5
PRKCSH-201ENST00000585325 PER1O15534 1290 aaPredicted RBP18.17■□□□□ 0.5
PRKCSH-201ENST00000585325 MTHFSP49914 203 aa18.17■□□□□ 0.5
PRKCSH-201ENST00000585325 ITPK1Q13572 414 aa18.17■□□□□ 0.5
PRKCSH-201ENST00000585325 AMIGO3Q86WK7 504 aa18.17■□□□□ 0.5
PRKCSH-201ENST00000585325 KDRP35968 1356 aa18.17■□□□□ 0.5
PRKCSH-201ENST00000585325 SSFA2P28290 1259 aa18.16■□□□□ 0.5
PRKCSH-201ENST00000585325 CABP4P57796 275 aa18.16■□□□□ 0.5
PRKCSH-201ENST00000585325 CNGB1Q14028 1251 aaPredicted RBP18.16■□□□□ 0.5
PRKCSH-201ENST00000585325 RBM42Q9BTD8 480 aaKnown RBP18.16■□□□□ 0.5
PRKCSH-201ENST00000585325 GNPATO15228 680 aa18.15■□□□□ 0.5
PRKCSH-201ENST00000585325 CD2APQ9Y5K6 639 aa18.15■□□□□ 0.5
PRKCSH-201ENST00000585325 ZNF831Q5JPB2 1677 aa18.12■□□□□ 0.49
PRKCSH-201ENST00000585325 HMOX1P09601 288 aa18.12■□□□□ 0.49
PRKCSH-201ENST00000585325 DIAPH1O60610 1272 aaKnown RBP18.11■□□□□ 0.49
PRKCSH-201ENST00000585325 SLC4A9Q96Q91 983 aa18.11■□□□□ 0.49
PRKCSH-201ENST00000585325 COL5A3P25940 1745 aaPredicted RBP18.11■□□□□ 0.49
PRKCSH-201ENST00000585325 SCN11AQ9UI33 1791 aa18.11■□□□□ 0.49
PRKCSH-201ENST00000585325 AKAP4Q5JQC9 854 aa18.1■□□□□ 0.49
PRKCSH-201ENST00000585325 NFATC2IPQ8NCF5 419 aa18.1■□□□□ 0.49
PRKCSH-201ENST00000585325 NPC1L1Q9UHC9 1359 aa18.09■□□□□ 0.49
PRKCSH-201ENST00000585325 KIF3CO14782 793 aa18.09■□□□□ 0.49
PRKCSH-201ENST00000585325 PTCD1O75127 700 aaKnown RBP18.09■□□□□ 0.49
PRKCSH-201ENST00000585325 WWC3Q9ULE0 1092 aa18.09■□□□□ 0.49
PRKCSH-201ENST00000585325 RTCBQ9Y3I0 505 aaKnown RBP18.09■□□□□ 0.49
PRKCSH-201ENST00000585325 TRAPPC3LQ5T215 181 aa18.08■□□□□ 0.48
PRKCSH-201ENST00000585325 CNTNAP4Q9C0A0 1308 aa18.07■□□□□ 0.48
PRKCSH-201ENST00000585325 RC3H1Q5TC82 1133 aaKnown RBP18.06■□□□□ 0.48
PRKCSH-201ENST00000585325 VIRMAQ69YN4 1812 aaKnown RBP18.06■□□□□ 0.48
PRKCSH-201ENST00000585325 U2SURPO15042 1029 aaKnown RBP18.05■□□□□ 0.48
PRKCSH-201ENST00000585325 APLP1P51693 650 aa18.05■□□□□ 0.48
PRKCSH-201ENST00000585325 LGR6Q9HBX8 967 aa18.05■□□□□ 0.48
PRKCSH-201ENST00000585325 COL3A1P02461 1466 aaPredicted RBP18.05■□□□□ 0.48
PRKCSH-201ENST00000585325 TJP1Q07157 1748 aa18.04■□□□□ 0.48
PRKCSH-201ENST00000585325 ADRA2BP18089 450 aa18.04■□□□□ 0.48
PRKCSH-201ENST00000585325 MTHFSDQ2M296 383 aaKnown RBP18.04■□□□□ 0.48
PRKCSH-201ENST00000585325 ARHGEF1Q92888 912 aaKnown RBP18.04■□□□□ 0.48
PRKCSH-201ENST00000585325 SLC52A2Q9HAB3 445 aa18.04■□□□□ 0.48
PRKCSH-201ENST00000585325 MRC1P22897 1456 aa18.03■□□□□ 0.48
PRKCSH-201ENST00000585325 RNMTO43148 476 aaKnown RBP18.03■□□□□ 0.48
PRKCSH-201ENST00000585325 RPS6KA4O75676 772 aa18.03■□□□□ 0.48
PRKCSH-201ENST00000585325 MMP10P09238 476 aa18.03■□□□□ 0.48
PRKCSH-201ENST00000585325 RFC4P35249 363 aa18.03■□□□□ 0.48
PRKCSH-201ENST00000585325 MYH14Q7Z406 1995 aaKnown RBP18.02■□□□□ 0.48
PRKCSH-201ENST00000585325 CICQ96RK0 1608 aaPredicted RBP18.02■□□□□ 0.48
PRKCSH-201ENST00000585325 C4AP0C0L4 1744 aa18.02■□□□□ 0.48
PRKCSH-201ENST00000585325 CRKLP46109 303 aaKnown RBP18.02■□□□□ 0.48
PRKCSH-201ENST00000585325 NLGN1Q8N2Q7 840 aa18.01■□□□□ 0.47
PRKCSH-201ENST00000585325 ADAMTS7Q9UKP4 1686 aa18■□□□□ 0.47
PRKCSH-201ENST00000585325 SLC39A6Q13433 755 aa18■□□□□ 0.47
PRKCSH-201ENST00000585325 DNAJC5GQ8N7S2 189 aa18■□□□□ 0.47
PRKCSH-201ENST00000585325 GYS1P13807 737 aa17.99■□□□□ 0.47
PRKCSH-201ENST00000585325 CFAP53Q96M91 514 aa17.99■□□□□ 0.47
PRKCSH-201ENST00000585325 DNAJC10Q8IXB1 793 aa17.98■□□□□ 0.47
PRKCSH-201ENST00000585325 TOMM70O94826 608 aa17.97■□□□□ 0.47
PRKCSH-201ENST00000585325 GAS2L2Q8NHY3 880 aa17.97■□□□□ 0.47
PRKCSH-201ENST00000585325 PARP3Q9Y6F1 533 aa17.97■□□□□ 0.47
PRKCSH-201ENST00000585325 KCPQ6ZWJ8 1503 aa17.97■□□□□ 0.47
PRKCSH-201ENST00000585325 KIF13BQ9NQT8 1826 aa17.96■□□□□ 0.47
PRKCSH-201ENST00000585325 INTS5Q6P9B9 1019 aaKnown RBP17.96■□□□□ 0.47
PRKCSH-201ENST00000585325 CCDC87Q9NVE4 849 aa17.96■□□□□ 0.47
PRKCSH-201ENST00000585325 SRP68Q9UHB9 627 aaKnown RBP17.96■□□□□ 0.47
PRKCSH-201ENST00000585325 GNAT3A8MTJ3 354 aa17.95■□□□□ 0.46
PRKCSH-201ENST00000585325 C10orf71Q711Q0 1435 aa17.95■□□□□ 0.46
PRKCSH-201ENST00000585325 USP42Q9H9J4 1324 aaKnown RBP17.95■□□□□ 0.46
PRKCSH-201ENST00000585325 PXDNLA1KZ92 1463 aa17.95■□□□□ 0.46
PRKCSH-201ENST00000585325 N4BP2Q86UW6 1770 aaPredicted RBP17.94■□□□□ 0.46
PRKCSH-201ENST00000585325 PPP2R1AP30153 589 aa17.94■□□□□ 0.46
PRKCSH-201ENST00000585325 TEFQ10587 303 aa17.94■□□□□ 0.46
PRKCSH-201ENST00000585325 TTC5Q8N0Z6 440 aa17.94■□□□□ 0.46
PRKCSH-201ENST00000585325 NUDCQ9Y266 331 aa17.94■□□□□ 0.46
PRKCSH-201ENST00000585325 UBR2Q8IWV8 1755 aa17.94■□□□□ 0.46
PRKCSH-201ENST00000585325 KIAA1551Q9HCM1 1747 aa17.93■□□□□ 0.46
PRKCSH-201ENST00000585325 CYP19A1P11511 503 aaPredicted RBP17.93■□□□□ 0.46
PRKCSH-201ENST00000585325 PRKAR2BP31323 418 aa17.93■□□□□ 0.46
PRKCSH-201ENST00000585325 TGFB2P61812 414 aa17.92■□□□□ 0.46
PRKCSH-201ENST00000585325 FKBP8Q14318 412 aa17.92■□□□□ 0.46
PRKCSH-201ENST00000585325 COL13A1Q5TAT6 717 aaPredicted RBP17.92■□□□□ 0.46
PRKCSH-201ENST00000585325 IL17REQ8NFR9 667 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms