RNA–Protein interactions for RNA: ENST00000585315.5

CDH8-214, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 9,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-214ENST00000585315 CENPHQ9H3R5 247 aa8.53□□□□□ -1.04
CDH8-214ENST00000585315 PRAM1Q96QH2 718 aa8.53□□□□□ -1.04
CDH8-214ENST00000585315 TANGO6Q9C0B7 1094 aa8.53□□□□□ -1.04
CDH8-214ENST00000585315 CCDC61Q9Y6R9 512 aa8.53□□□□□ -1.04
CDH8-214ENST00000585315 ZNF530Q6P9A1 599 aaPredicted RBP8.53□□□□□ -1.04
CDH8-214ENST00000585315 UBE2HP62256 183 aa8.53□□□□□ -1.04
CDH8-214ENST00000585315 CWC27Q6UX04 472 aaKnown RBP8.53□□□□□ -1.04
CDH8-214ENST00000585315 CCDC91Q7Z6B0 441 aa8.53□□□□□ -1.04
CDH8-214ENST00000585315 FAM177A1Q8N128 213 aaPredicted RBP8.53□□□□□ -1.04
CDH8-214ENST00000585315 TMEM57Q8N5G2 664 aa8.53□□□□□ -1.04
CDH8-214ENST00000585315 GIMAP7Q8NHV1 300 aa8.53□□□□□ -1.04
CDH8-214ENST00000585315 SPG7Q9UQ90 795 aa8.53□□□□□ -1.04
CDH8-214ENST00000585315 KIF4BQ2VIQ3 1234 aa8.53□□□□□ -1.04
CDH8-214ENST00000585315 KANK3Q6NY19 840 aa8.53□□□□□ -1.04
CDH8-214ENST00000585315 TAX1BP1Q86VP1 789 aa8.53□□□□□ -1.04
CDH8-214ENST00000585315 TOP2BQ02880 1626 aa8.52□□□□□ -1.04
CDH8-214ENST00000585315 PTPRCP08575 1304 aa8.52□□□□□ -1.04
CDH8-214ENST00000585315 TBC1D2Q9BYX2 928 aa8.52□□□□□ -1.04
CDH8-214ENST00000585315 TAOK3Q9H2K8 898 aa8.52□□□□□ -1.04
CDH8-214ENST00000585315 CLIP2Q9UDT6 1046 aa8.52□□□□□ -1.04
CDH8-214ENST00000585315 SMC1AQ14683 1233 aaKnown RBP8.52□□□□□ -1.05
CDH8-214ENST00000585315 SRRTQ9BXP5 876 aaKnown RBP8.52□□□□□ -1.05
CDH8-214ENST00000585315 POLR3GO15318 223 aaPredicted RBP8.52□□□□□ -1.05
CDH8-214ENST00000585315 CCDC150Q8NCX0 1101 aa8.52□□□□□ -1.05
CDH8-214ENST00000585315 HMG20BQ9P0W2 317 aa8.52□□□□□ -1.05
CDH8-214ENST00000585315 IL16Q14005 1332 aa8.52□□□□□ -1.05
CDH8-214ENST00000585315 CCDC171Q6TFL3 1326 aa8.52□□□□□ -1.05
CDH8-214ENST00000585315 TNNT1P13805 278 aa8.52□□□□□ -1.05
CDH8-214ENST00000585315 C8orf76Q96K31 380 aa8.52□□□□□ -1.05
CDH8-214ENST00000585315 RTEL1-TNFRSF6BF6WH68 1400 aa8.52□□□□□ -1.05
CDH8-214ENST00000585315 AQRO60306 1485 aaKnown RBP eCLIP8.52□□□□□ -1.05
CDH8-214ENST00000585315 STX1AQ16623 288 aa8.52□□□□□ -1.05
CDH8-214ENST00000585315 TNPO1Q92973 898 aaKnown RBP8.52□□□□□ -1.05
CDH8-214ENST00000585315 TRIM21P19474 475 aaKnown RBP8.51□□□□□ -1.05
CDH8-214ENST00000585315 LARP1Q6PKG0 1096 aaKnown RBP8.51□□□□□ -1.05
CDH8-214ENST00000585315 TBC1D32Q96NH3 1257 aa8.51□□□□□ -1.05
CDH8-214ENST00000585315 TDO2P48775 406 aa8.51□□□□□ -1.05
CDH8-214ENST00000585315 ANAPC15P60006 121 aa8.51□□□□□ -1.05
CDH8-214ENST00000585315 STK3Q13188 491 aa8.51□□□□□ -1.05
CDH8-214ENST00000585315 DNAI2Q9GZS0 605 aa8.51□□□□□ -1.05
CDH8-214ENST00000585315 ZSCAN16Q9H4T2 348 aaPredicted RBP8.51□□□□□ -1.05
CDH8-214ENST00000585315 ZNF165P49910 485 aa8.51□□□□□ -1.05
CDH8-214ENST00000585315 GCOM1H8Y6P7 765 aaPredicted RBP8.51□□□□□ -1.05
CDH8-214ENST00000585315 FYB1O15117 783 aa8.51□□□□□ -1.05
CDH8-214ENST00000585315 MYZAPP0CAP1 466 aa8.51□□□□□ -1.05
CDH8-214ENST00000585315 SSH1Q8WYL5 1049 aa8.51□□□□□ -1.05
CDH8-214ENST00000585315 DDX12PQ92771 950 aa8.51□□□□□ -1.05
CDH8-214ENST00000585315 YEATS4O95619 227 aa8.51□□□□□ -1.05
CDH8-214ENST00000585315 THEMISQ8N1K5 641 aaPredicted RBP8.51□□□□□ -1.05
CDH8-214ENST00000585315 RNF41Q9H4P4 317 aaPredicted RBP8.51□□□□□ -1.05
CDH8-214ENST00000585315 URI1O94763 535 aaPredicted RBP8.51□□□□□ -1.05
CDH8-214ENST00000585315 SMARCC1Q92922 1105 aaPredicted RBP8.51□□□□□ -1.05
CDH8-214ENST00000585315 CABP1Q9NZU7 370 aa8.51□□□□□ -1.05
CDH8-214ENST00000585315 RAD54L2Q9Y4B4 1467 aa8.51□□□□□ -1.05
CDH8-214ENST00000585315 AFAP1Q8N556 730 aa8.51□□□□□ -1.05
CDH8-214ENST00000585315 IVLP07476 585 aa8.5□□□□□ -1.05
CDH8-214ENST00000585315 ARHGAP45Q92619 1136 aa8.5□□□□□ -1.05
CDH8-214ENST00000585315 NCOA1Q15788 1441 aa8.5□□□□□ -1.05
CDH8-214ENST00000585315 ALS2CR12Q96Q35 445 aa8.5□□□□□ -1.05
CDH8-214ENST00000585315 CDK19Q9BWU1 502 aa8.5□□□□□ -1.05
CDH8-214ENST00000585315 NSD3Q9BZ95 1437 aa8.5□□□□□ -1.05
CDH8-214ENST00000585315 CCDC175P0C221 793 aa8.5□□□□□ -1.05
CDH8-214ENST00000585315 SPECC1LQ69YQ0 1117 aa8.5□□□□□ -1.05
CDH8-214ENST00000585315 KRT222Q8N1A0 295 aa8.5□□□□□ -1.05
CDH8-214ENST00000585315 AIDAQ96BJ3 306 aa8.5□□□□□ -1.05
CDH8-214ENST00000585315 GOLIM4O00461 696 aa8.5□□□□□ -1.05
CDH8-214ENST00000585315 BMP15O95972 392 aa8.5□□□□□ -1.05
CDH8-214ENST00000585315 CASQ1P31415 396 aa8.5□□□□□ -1.05
CDH8-214ENST00000585315 FKBP4Q02790 459 aaKnown RBP eCLIP8.5□□□□□ -1.05
CDH8-214ENST00000585315 DNAAF4Q8WXU2 420 aa8.5□□□□□ -1.05
CDH8-214ENST00000585315 KCNH5Q8NCM2 988 aa8.5□□□□□ -1.05
CDH8-214ENST00000585315 MAP2K1Q02750 393 aaPredicted RBP8.49□□□□□ -1.05
CDH8-214ENST00000585315 CETN1Q12798 172 aa8.49□□□□□ -1.05
CDH8-214ENST00000585315 MSH5O43196 834 aa8.49□□□□□ -1.05
CDH8-214ENST00000585315 STX6O43752 255 aa8.49□□□□□ -1.05
CDH8-214ENST00000585315 NUP133Q8WUM0 1156 aa8.49□□□□□ -1.05
CDH8-214ENST00000585315 EXOC6BQ9Y2D4 811 aa8.49□□□□□ -1.05
CDH8-214ENST00000585315 GNAT3A8MTJ3 354 aa8.49□□□□□ -1.05
CDH8-214ENST00000585315 BAG4O95429 457 aaKnown RBP8.49□□□□□ -1.05
CDH8-214ENST00000585315 SPAG1Q07617 926 aa8.49□□□□□ -1.05
CDH8-214ENST00000585315 BBXQ8WY36 941 aaPredicted RBP8.49□□□□□ -1.05
CDH8-214ENST00000585315 HDAC1Q13547 482 aaPredicted RBP8.49□□□□□ -1.05
CDH8-214ENST00000585315 CTCFLQ8NI51 663 aaPredicted RBP8.49□□□□□ -1.05
CDH8-214ENST00000585315 TSG101Q99816 390 aa8.49□□□□□ -1.05
CDH8-214ENST00000585315 PLCD4Q9BRC7 762 aa8.49□□□□□ -1.05
CDH8-214ENST00000585315 GTPBP4Q9BZE4 634 aaKnown RBP8.49□□□□□ -1.05
CDH8-214ENST00000585315 ARFGAP3Q9NP61 516 aa8.49□□□□□ -1.05
CDH8-214ENST00000585315 ANKRD62A6NC57 917 aa8.49□□□□□ -1.05
CDH8-214ENST00000585315 AMOTQ4VCS5 1084 aa8.49□□□□□ -1.05
CDH8-214ENST00000585315 CACNA2D4Q7Z3S7 1137 aa8.49□□□□□ -1.05
CDH8-214ENST00000585315 IQCA1Q86XH1 822 aa8.49□□□□□ -1.05
CDH8-214ENST00000585315 C11orf95C9JLR9 678 aaPredicted RBP8.48□□□□□ -1.05
CDH8-214ENST00000585315 FAM114A1Q8IWE2 563 aa8.48□□□□□ -1.05
CDH8-214ENST00000585315 TIGD1Q96MW7 591 aa8.48□□□□□ -1.05
CDH8-214ENST00000585315 ERICH4A6NGS2 130 aa8.48□□□□□ -1.05
CDH8-214ENST00000585315 C16orf45Q96MC5 204 aaPredicted RBP8.48□□□□□ -1.05
CDH8-214ENST00000585315 CABP4P57796 275 aa8.48□□□□□ -1.05
CDH8-214ENST00000585315 FERMT3Q86UX7 667 aa8.48□□□□□ -1.05
CDH8-214ENST00000585315 PAF1Q8N7H5 531 aa8.48□□□□□ -1.05
CDH8-214ENST00000585315 PLVAPQ9BX97 442 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms