RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 GNPATO15228 680 aa25.44■■□□□ 1.66
TOP3A-220ENST00000585031 EMILIN1Q9Y6C2 1016 aa25.44■■□□□ 1.66
TOP3A-220ENST00000585031 HTRA3P83110 453 aa25.43■■□□□ 1.66
TOP3A-220ENST00000585031 BCS1LQ9Y276 419 aa25.42■■□□□ 1.66
TOP3A-220ENST00000585031 ATP6V1AP38606 617 aa25.4■■□□□ 1.66
TOP3A-220ENST00000585031 PRELPP51888 382 aa25.4■■□□□ 1.66
TOP3A-220ENST00000585031 FSTL1Q12841 308 aa25.4■■□□□ 1.66
TOP3A-220ENST00000585031 ARHGAP27Q6ZUM4 889 aa25.4■■□□□ 1.66
TOP3A-220ENST00000585031 SLC4A9Q96Q91 983 aa25.39■■□□□ 1.66
TOP3A-220ENST00000585031 ATG3Q9NT62 314 aa25.39■■□□□ 1.66
TOP3A-220ENST00000585031 C10orf71Q711Q0 1435 aa25.38■■□□□ 1.65
TOP3A-220ENST00000585031 CAPN15O75808 1086 aa25.38■■□□□ 1.65
TOP3A-220ENST00000585031 KIF24Q5T7B8 1368 aa25.38■■□□□ 1.65
TOP3A-220ENST00000585031 DPEP1P16444 411 aa25.37■■□□□ 1.65
TOP3A-220ENST00000585031 TNS4Q8IZW8 715 aa25.37■■□□□ 1.65
TOP3A-220ENST00000585031 TMOD3Q9NYL9 352 aa25.37■■□□□ 1.65
TOP3A-220ENST00000585031 KCNA3P22001 575 aa25.36■■□□□ 1.65
TOP3A-220ENST00000585031 CARD14Q9BXL6 1004 aa25.36■■□□□ 1.65
TOP3A-220ENST00000585031 MYH14Q7Z406 1995 aaKnown RBP25.36■■□□□ 1.65
TOP3A-220ENST00000585031 C4AP0C0L4 1744 aa25.35■■□□□ 1.65
TOP3A-220ENST00000585031 ANKRD26Q9UPS8 1709 aa25.35■■□□□ 1.65
TOP3A-220ENST00000585031 EYA1Q99502 592 aa25.35■■□□□ 1.65
TOP3A-220ENST00000585031 SPG7Q9UQ90 795 aa25.35■■□□□ 1.65
TOP3A-220ENST00000585031 ARFGEF1Q9Y6D6 1849 aa25.35■■□□□ 1.65
TOP3A-220ENST00000585031 TONSLQ96HA7 1378 aa25.34■■□□□ 1.65
TOP3A-220ENST00000585031 C9orf131Q5VYM1 1079 aa25.34■■□□□ 1.65
TOP3A-220ENST00000585031 NLGN1Q8N2Q7 840 aa25.34■■□□□ 1.65
TOP3A-220ENST00000585031 COL5A3P25940 1745 aaPredicted RBP25.34■■□□□ 1.65
TOP3A-220ENST00000585031 KDRP35968 1356 aa25.33■■□□□ 1.65
TOP3A-220ENST00000585031 PHKG2P15735 406 aa25.33■■□□□ 1.65
TOP3A-220ENST00000585031 C16orf71Q8IYS4 520 aaPredicted RBP25.33■■□□□ 1.65
TOP3A-220ENST00000585031 ARHGEF1Q92888 912 aaKnown RBP25.33■■□□□ 1.65
TOP3A-220ENST00000585031 FCHSD2O94868 740 aa25.32■■□□□ 1.64
TOP3A-220ENST00000585031 TMF1P82094 1093 aa25.32■■□□□ 1.64
TOP3A-220ENST00000585031 TRAPPC3LQ5T215 181 aa25.32■■□□□ 1.64
TOP3A-220ENST00000585031 GYS1P13807 737 aa25.31■■□□□ 1.64
TOP3A-220ENST00000585031 SBF1O95248 1867 aa25.3■■□□□ 1.64
TOP3A-220ENST00000585031 PPM1GO15355 546 aaPredicted RBP25.3■■□□□ 1.64
TOP3A-220ENST00000585031 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.3■■□□□ 1.64
TOP3A-220ENST00000585031 RTCBQ9Y3I0 505 aaKnown RBP25.3■■□□□ 1.64
TOP3A-220ENST00000585031 ZNF831Q5JPB2 1677 aa25.29■■□□□ 1.64
TOP3A-220ENST00000585031 KCPQ6ZWJ8 1503 aa25.29■■□□□ 1.64
TOP3A-220ENST00000585031 IFNL2Q8IZJ0 200 aa25.29■■□□□ 1.64
TOP3A-220ENST00000585031 CCDC87Q9NVE4 849 aa25.28■■□□□ 1.64
TOP3A-220ENST00000585031 PLEKHG2Q9H7P9 1386 aa25.28■■□□□ 1.64
TOP3A-220ENST00000585031 RRAGCQ9HB90 399 aa25.27■■□□□ 1.64
TOP3A-220ENST00000585031 WASHC2AQ641Q2 1341 aa25.27■■□□□ 1.64
TOP3A-220ENST00000585031 SLC24A1O60721 1099 aa25.26■■□□□ 1.63
TOP3A-220ENST00000585031 KDM2BQ8NHM5 1336 aa25.26■■□□□ 1.63
TOP3A-220ENST00000585031 RC3H1Q5TC82 1133 aaKnown RBP25.25■■□□□ 1.63
TOP3A-220ENST00000585031 RBM42Q9BTD8 480 aaKnown RBP25.25■■□□□ 1.63
TOP3A-220ENST00000585031 DCAF5Q96JK2 942 aa25.24■■□□□ 1.63
TOP3A-220ENST00000585031 RPS6KA4O75676 772 aa25.23■■□□□ 1.63
TOP3A-220ENST00000585031 ADRA2BP18089 450 aa25.23■■□□□ 1.63
TOP3A-220ENST00000585031 PIM2Q9P1W9 311 aa25.23■■□□□ 1.63
TOP3A-220ENST00000585031 SMC1BQ8NDV3 1235 aa25.22■■□□□ 1.63
TOP3A-220ENST00000585031 POLKQ9UBT6 870 aa25.22■■□□□ 1.63
TOP3A-220ENST00000585031 PARP3Q9Y6F1 533 aa25.22■■□□□ 1.63
TOP3A-220ENST00000585031 CNTNAP4Q9C0A0 1308 aa25.21■■□□□ 1.63
TOP3A-220ENST00000585031 RFC4P35249 363 aa25.21■■□□□ 1.63
TOP3A-220ENST00000585031 SRP68Q9UHB9 627 aaKnown RBP25.21■■□□□ 1.63
TOP3A-220ENST00000585031 DDR1Q08345 913 aa25.2■■□□□ 1.62
TOP3A-220ENST00000585031 RNF181Q9P0P0 153 aa25.2■■□□□ 1.62
TOP3A-220ENST00000585031 EIF4A2Q14240 407 aaKnown RBP25.19■■□□□ 1.62
TOP3A-220ENST00000585031 DALRD3Q5D0E6 543 aaKnown RBP25.19■■□□□ 1.62
TOP3A-220ENST00000585031 TNRC6CQ9HCJ0 1690 aaKnown RBP25.19■■□□□ 1.62
TOP3A-220ENST00000585031 ERVV-2B6SEH9 535 aa25.18■■□□□ 1.62
TOP3A-220ENST00000585031 CHRNA5P30532 468 aa25.18■■□□□ 1.62
TOP3A-220ENST00000585031 FKBP8Q14318 412 aa25.18■■□□□ 1.62
TOP3A-220ENST00000585031 KDM6AO15550 1401 aaPredicted RBP25.18■■□□□ 1.62
TOP3A-220ENST00000585031 ADAMTS7Q9UKP4 1686 aa25.17■■□□□ 1.62
TOP3A-220ENST00000585031 HSPA1AP0DMV8 641 aaKnown RBP25.17■■□□□ 1.62
TOP3A-220ENST00000585031 HSPA1BP0DMV9 641 aaKnown RBP25.17■■□□□ 1.62
TOP3A-220ENST00000585031 TJP1Q07157 1748 aa25.15■■□□□ 1.62
TOP3A-220ENST00000585031 CCDC88AQ3V6T2 1871 aa25.13■■□□□ 1.61
TOP3A-220ENST00000585031 PTCD1O75127 700 aaKnown RBP25.12■■□□□ 1.61
TOP3A-220ENST00000585031 CRKLP46109 303 aaKnown RBP25.12■■□□□ 1.61
TOP3A-220ENST00000585031 USP42Q9H9J4 1324 aaKnown RBP25.12■■□□□ 1.61
TOP3A-220ENST00000585031 RASSF7Q02833 373 aa25.11■■□□□ 1.61
TOP3A-220ENST00000585031 AFDNP55196 1824 aaKnown RBP25.11■■□□□ 1.61
TOP3A-220ENST00000585031 ZC3H4Q9UPT8 1303 aaKnown RBP25.11■■□□□ 1.61
TOP3A-220ENST00000585031 POLRMTO00411 1230 aaKnown RBP25.1■■□□□ 1.61
TOP3A-220ENST00000585031 VEGFAP15692 232 aaPredicted RBP25.1■■□□□ 1.61
TOP3A-220ENST00000585031 TM4SF1P30408 202 aa25.1■■□□□ 1.61
TOP3A-220ENST00000585031 TNNT2P45379 298 aaPredicted RBP25.1■■□□□ 1.61
TOP3A-220ENST00000585031 CDCA8Q53HL2 280 aa25.09■■□□□ 1.61
TOP3A-220ENST00000585031 GLTPD2A6NH11 291 aa25.08■■□□□ 1.61
TOP3A-220ENST00000585031 CABP4P57796 275 aa25.08■■□□□ 1.61
TOP3A-220ENST00000585031 INTS5Q6P9B9 1019 aaKnown RBP25.08■■□□□ 1.61
TOP3A-220ENST00000585031 ZNF530Q6P9A1 599 aaPredicted RBP25.07■■□□□ 1.6
TOP3A-220ENST00000585031 NFATC2IPQ8NCF5 419 aa25.06■■□□□ 1.6
TOP3A-220ENST00000585031 HSP90AB1P08238 724 aaKnown RBP25.05■■□□□ 1.6
TOP3A-220ENST00000585031 PLEKHO1Q53GL0 409 aaPredicted RBP25.05■■□□□ 1.6
TOP3A-220ENST00000585031 AEBP1Q8IUX7 1158 aa25.04■■□□□ 1.6
TOP3A-220ENST00000585031 DLEC1Q9Y238 1755 aa25.03■■□□□ 1.6
TOP3A-220ENST00000585031 NRXN2Q9P2S2 1712 aa25.03■■□□□ 1.6
TOP3A-220ENST00000585031 POTECB2RU33 542 aa25.02■■□□□ 1.6
TOP3A-220ENST00000585031 LMNB1P20700 586 aa25.02■■□□□ 1.6
TOP3A-220ENST00000585031 USPL1Q5W0Q7 1092 aa25.02■■□□□ 1.6
TOP3A-220ENST00000585031 TIAM2Q8IVF5 1701 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms