RNA–Protein interactions for RNA: ENST00000585027.1

TMEM199-209, Transcript of transmembrane protein 199, humanhuman

TSL 2

Gene TMEM199, Length 586 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM199-209ENST00000585027 COL3A1P02461 1466 aaPredicted RBP13.7□□□□□ -0.22
TMEM199-209ENST00000585027 ZNF530Q6P9A1 599 aaPredicted RBP13.7□□□□□ -0.22
TMEM199-209ENST00000585027 CICQ96RK0 1608 aaPredicted RBP13.69□□□□□ -0.22
TMEM199-209ENST00000585027 YY1P25490 414 aa13.69□□□□□ -0.22
TMEM199-209ENST00000585027 CC2D1BQ5T0F9 858 aaKnown RBP13.69□□□□□ -0.22
TMEM199-209ENST00000585027 SLC4A9Q96Q91 983 aa13.69□□□□□ -0.22
TMEM199-209ENST00000585027 ADAMTS7Q9UKP4 1686 aa13.69□□□□□ -0.22
TMEM199-209ENST00000585027 AK7Q96M32 723 aa13.68□□□□□ -0.22
TMEM199-209ENST00000585027 UTRNP46939 3433 aa13.68□□□□□ -0.22
TMEM199-209ENST00000585027 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.67□□□□□ -0.22
TMEM199-209ENST00000585027 MSH5O43196 834 aa13.67□□□□□ -0.22
TMEM199-209ENST00000585027 SSFA2P28290 1259 aa13.67□□□□□ -0.22
TMEM199-209ENST00000585027 ATP6V1AP38606 617 aa13.67□□□□□ -0.22
TMEM199-209ENST00000585027 MRC1P22897 1456 aa13.67□□□□□ -0.22
TMEM199-209ENST00000585027 VIRMAQ69YN4 1812 aaKnown RBP13.67□□□□□ -0.22
TMEM199-209ENST00000585027 C1orf141Q5JVX7 400 aa13.66□□□□□ -0.22
TMEM199-209ENST00000585027 MSL1Q68DK7 614 aa13.66□□□□□ -0.22
TMEM199-209ENST00000585027 SMIM5Q71RC9 77 aa13.66□□□□□ -0.22
TMEM199-209ENST00000585027 NLGN2Q8NFZ4 835 aa13.66□□□□□ -0.22
TMEM199-209ENST00000585027 CHD4Q14839 1912 aa13.66□□□□□ -0.22
TMEM199-209ENST00000585027 TJP1Q07157 1748 aa13.65□□□□□ -0.22
TMEM199-209ENST00000585027 DIAPH1O60610 1272 aaKnown RBP13.65□□□□□ -0.22
TMEM199-209ENST00000585027 CABP4P57796 275 aa13.65□□□□□ -0.22
TMEM199-209ENST00000585027 AKAP4Q5JQC9 854 aa13.65□□□□□ -0.22
TMEM199-209ENST00000585027 MYH14Q7Z406 1995 aaKnown RBP13.64□□□□□ -0.23
TMEM199-209ENST00000585027 GNPATO15228 680 aa13.64□□□□□ -0.23
TMEM199-209ENST00000585027 PHF14O94880 888 aa13.64□□□□□ -0.23
TMEM199-209ENST00000585027 RC3H1Q5TC82 1133 aaKnown RBP13.64□□□□□ -0.23
TMEM199-209ENST00000585027 NFATC2IPQ8NCF5 419 aa13.64□□□□□ -0.23
TMEM199-209ENST00000585027 CNTNAP4Q9C0A0 1308 aa13.64□□□□□ -0.23
TMEM199-209ENST00000585027 HMOX1P09601 288 aa13.63□□□□□ -0.23
TMEM199-209ENST00000585027 KLHL34Q8N239 644 aa13.63□□□□□ -0.23
TMEM199-209ENST00000585027 CD2APQ9Y5K6 639 aa13.63□□□□□ -0.23
TMEM199-209ENST00000585027 C4AP0C0L4 1744 aa13.62□□□□□ -0.23
TMEM199-209ENST00000585027 GOLGB1Q14789 3259 aaKnown RBP13.61□□□□□ -0.23
TMEM199-209ENST00000585027 MTHFSDQ2M296 383 aaKnown RBP13.61□□□□□ -0.23
TMEM199-209ENST00000585027 RBM42Q9BTD8 480 aaKnown RBP13.61□□□□□ -0.23
TMEM199-209ENST00000585027 SLC52A2Q9HAB3 445 aa13.61□□□□□ -0.23
TMEM199-209ENST00000585027 LGR6Q9HBX8 967 aa13.61□□□□□ -0.23
TMEM199-209ENST00000585027 UBR2Q8IWV8 1755 aa13.6□□□□□ -0.23
TMEM199-209ENST00000585027 KCPQ6ZWJ8 1503 aa13.6□□□□□ -0.23
TMEM199-209ENST00000585027 KIF13BQ9NQT8 1826 aa13.6□□□□□ -0.23
TMEM199-209ENST00000585027 RNMTO43148 476 aaKnown RBP13.6□□□□□ -0.23
TMEM199-209ENST00000585027 ADRA2BP18089 450 aa13.6□□□□□ -0.23
TMEM199-209ENST00000585027 GPR162Q16538 588 aa13.6□□□□□ -0.23
TMEM199-209ENST00000585027 RTCBQ9Y3I0 505 aaKnown RBP13.6□□□□□ -0.23
TMEM199-209ENST00000585027 RPS6KA4O75676 772 aa13.59□□□□□ -0.23
TMEM199-209ENST00000585027 YBX3P16989 372 aaKnown RBP eCLIP13.59□□□□□ -0.23
TMEM199-209ENST00000585027 KIAA1551Q9HCM1 1747 aa13.59□□□□□ -0.23
TMEM199-209ENST00000585027 SIPA1L3O60292 1781 aaPredicted RBP13.58□□□□□ -0.23
TMEM199-209ENST00000585027 PTCD1O75127 700 aaKnown RBP13.58□□□□□ -0.24
TMEM199-209ENST00000585027 TRAPPC3LQ5T215 181 aa13.58□□□□□ -0.24
TMEM199-209ENST00000585027 ARHGEF1Q92888 912 aaKnown RBP13.58□□□□□ -0.24
TMEM199-209ENST00000585027 CRKLP46109 303 aaKnown RBP13.57□□□□□ -0.24
TMEM199-209ENST00000585027 ZNF784Q8NCA9 323 aaPredicted RBP13.57□□□□□ -0.24
TMEM199-209ENST00000585027 U2SURPO15042 1029 aaKnown RBP13.56□□□□□ -0.24
TMEM199-209ENST00000585027 MMP10P09238 476 aa13.56□□□□□ -0.24
TMEM199-209ENST00000585027 GYS1P13807 737 aa13.56□□□□□ -0.24
TMEM199-209ENST00000585027 PPP2R1AP30153 589 aa13.56□□□□□ -0.24
TMEM199-209ENST00000585027 CNGB1Q14028 1251 aaPredicted RBP13.56□□□□□ -0.24
TMEM199-209ENST00000585027 INTS5Q6P9B9 1019 aaKnown RBP13.56□□□□□ -0.24
TMEM199-209ENST00000585027 NLGN1Q8N2Q7 840 aa13.56□□□□□ -0.24
TMEM199-209ENST00000585027 GRIN3BO60391 1043 aa13.55□□□□□ -0.24
TMEM199-209ENST00000585027 RSPH6AQ9H0K4 717 aa13.55□□□□□ -0.24
TMEM199-209ENST00000585027 C10orf71Q711Q0 1435 aa13.55□□□□□ -0.24
TMEM199-209ENST00000585027 RFC4P35249 363 aa13.54□□□□□ -0.24
TMEM199-209ENST00000585027 SLC39A6Q13433 755 aa13.54□□□□□ -0.24
TMEM199-209ENST00000585027 DNAJC10Q8IXB1 793 aa13.54□□□□□ -0.24
TMEM199-209ENST00000585027 PELP1Q8IZL8 1130 aaKnown RBP13.54□□□□□ -0.24
TMEM199-209ENST00000585027 IL17REQ8NFR9 667 aa13.54□□□□□ -0.24
TMEM199-209ENST00000585027 GAS2L2Q8NHY3 880 aa13.54□□□□□ -0.24
TMEM199-209ENST00000585027 CFAP53Q96M91 514 aa13.54□□□□□ -0.24
TMEM199-209ENST00000585027 CEMIPQ8WUJ3 1361 aa13.54□□□□□ -0.24
TMEM199-209ENST00000585027 PXDNLA1KZ92 1463 aa13.54□□□□□ -0.24
TMEM199-209ENST00000585027 GNAT3A8MTJ3 354 aa13.53□□□□□ -0.24
TMEM199-209ENST00000585027 CYP19A1P11511 503 aaPredicted RBP13.53□□□□□ -0.24
TMEM199-209ENST00000585027 VSIG10Q8N0Z9 540 aa13.53□□□□□ -0.24
TMEM199-209ENST00000585027 PHACTR3Q96KR7 559 aa13.53□□□□□ -0.24
TMEM199-209ENST00000585027 USP42Q9H9J4 1324 aaKnown RBP13.53□□□□□ -0.24
TMEM199-209ENST00000585027 PRKAR2BP31323 418 aa13.52□□□□□ -0.25
TMEM199-209ENST00000585027 CCDC87Q9NVE4 849 aa13.52□□□□□ -0.25
TMEM199-209ENST00000585027 SOS1Q07889 1333 aaPredicted RBP13.52□□□□□ -0.25
TMEM199-209ENST00000585027 BRCA1P38398 1863 aaKnown RBP13.52□□□□□ -0.25
TMEM199-209ENST00000585027 N4BP2Q86UW6 1770 aaPredicted RBP13.51□□□□□ -0.25
TMEM199-209ENST00000585027 FKBP8Q14318 412 aa13.5□□□□□ -0.25
TMEM199-209ENST00000585027 SRP68Q9UHB9 627 aaKnown RBP13.5□□□□□ -0.25
TMEM199-209ENST00000585027 NUDCQ9Y266 331 aa13.5□□□□□ -0.25
TMEM199-209ENST00000585027 FCHSD2O94868 740 aa13.49□□□□□ -0.25
TMEM199-209ENST00000585027 TGFB2P61812 414 aa13.49□□□□□ -0.25
TMEM199-209ENST00000585027 DDR1Q08345 913 aa13.49□□□□□ -0.25
TMEM199-209ENST00000585027 ZNF790Q6PG37 636 aa13.49□□□□□ -0.25
TMEM199-209ENST00000585027 ZBTB1Q9Y2K1 713 aa13.49□□□□□ -0.25
TMEM199-209ENST00000585027 NRXN2Q9P2S2 1712 aa13.49□□□□□ -0.25
TMEM199-209ENST00000585027 ADCY9O60503 1353 aa13.48□□□□□ -0.25
TMEM199-209ENST00000585027 COL15A1P39059 1388 aa13.48□□□□□ -0.25
TMEM199-209ENST00000585027 HEG1Q9ULI3 1381 aa13.48□□□□□ -0.25
TMEM199-209ENST00000585027 U2AF1L5P0DN76 240 aaPredicted RBP13.48□□□□□ -0.25
TMEM199-209ENST00000585027 TM4SF1P30408 202 aa13.48□□□□□ -0.25
TMEM199-209ENST00000585027 U2AF1Q01081 240 aaKnown RBP eCLIP13.48□□□□□ -0.25
TMEM199-209ENST00000585027 TEFQ10587 303 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms