RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 STRCP1A6NGW2 1772 aa8.25□□□□□ -1.09
CDH8-213ENST00000584966 CHD2O14647 1828 aaKnown RBP8.24□□□□□ -1.09
CDH8-213ENST00000584966 RIMS2Q9UQ26 1411 aa8.24□□□□□ -1.09
CDH8-213ENST00000584966 FCHSD2O94868 740 aa8.24□□□□□ -1.09
CDH8-213ENST00000584966 BRPF1P55201 1214 aaPredicted RBP8.24□□□□□ -1.09
CDH8-213ENST00000584966 BRICD5Q6PL45 260 aa8.24□□□□□ -1.09
CDH8-213ENST00000584966 RNF19BQ6ZMZ0 732 aa8.24□□□□□ -1.09
CDH8-213ENST00000584966 SIN3AQ96ST3 1273 aa8.24□□□□□ -1.09
CDH8-213ENST00000584966 DDX11L8A8MPP1 907 aa8.23□□□□□ -1.09
CDH8-213ENST00000584966 MSS51Q4VC12 460 aa8.23□□□□□ -1.09
CDH8-213ENST00000584966 METTL3Q86U44 580 aaKnown RBP8.23□□□□□ -1.09
CDH8-213ENST00000584966 TXNDC2Q86VQ3 553 aa8.23□□□□□ -1.09
CDH8-213ENST00000584966 ANKLE2Q86XL3 938 aa8.23□□□□□ -1.09
CDH8-213ENST00000584966 SCAF11Q99590 1463 aaKnown RBP8.23□□□□□ -1.09
CDH8-213ENST00000584966 REPIN1Q9BWE0 567 aaKnown RBP8.22□□□□□ -1.09
CDH8-213ENST00000584966 SALL2Q9Y467 1007 aaPredicted RBP8.22□□□□□ -1.09
CDH8-213ENST00000584966 RPGRIP1LQ68CZ1 1315 aa8.22□□□□□ -1.09
CDH8-213ENST00000584966 XIRP1Q702N8 1843 aaKnown RBP8.22□□□□□ -1.09
CDH8-213ENST00000584966 NPHP4O75161 1426 aaPredicted RBP8.21□□□□□ -1.09
CDH8-213ENST00000584966 NRXN1Q9ULB1 1477 aa8.21□□□□□ -1.09
CDH8-213ENST00000584966 BMP1P13497 986 aa8.21□□□□□ -1.1
CDH8-213ENST00000584966 NUTM2DQ5VT03 806 aaPredicted RBP8.21□□□□□ -1.1
CDH8-213ENST00000584966 ERICH6Q7L0X2 663 aa8.21□□□□□ -1.1
CDH8-213ENST00000584966 SETBP1Q9Y6X0 1596 aa8.21□□□□□ -1.1
CDH8-213ENST00000584966 ERBB4Q15303 1308 aa8.21□□□□□ -1.1
CDH8-213ENST00000584966 PLEKHG1Q9ULL1 1385 aa8.21□□□□□ -1.1
CDH8-213ENST00000584966 ADAMTS13Q76LX8 1427 aa8.2□□□□□ -1.1
CDH8-213ENST00000584966 RGL3Q3MIN7 710 aa8.2□□□□□ -1.1
CDH8-213ENST00000584966 SMYD5Q6GMV2 418 aa8.2□□□□□ -1.1
CDH8-213ENST00000584966 DAXXQ9UER7 740 aaPredicted RBP8.2□□□□□ -1.1
CDH8-213ENST00000584966 LTBP4Q8N2S1 1624 aa8.19□□□□□ -1.1
CDH8-213ENST00000584966 H3BM21 787 aa8.19□□□□□ -1.1
CDH8-213ENST00000584966 ZMYND10O75800 440 aa8.19□□□□□ -1.1
CDH8-213ENST00000584966 ZNF326Q5BKZ1 582 aaKnown RBP8.19□□□□□ -1.1
CDH8-213ENST00000584966 RC3H1Q5TC82 1133 aaKnown RBP8.19□□□□□ -1.1
CDH8-213ENST00000584966 NPAS3Q8IXF0 933 aa8.19□□□□□ -1.1
CDH8-213ENST00000584966 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.19□□□□□ -1.1
CDH8-213ENST00000584966 SLC24A3Q9HC58 644 aa8.19□□□□□ -1.1
CDH8-213ENST00000584966 EID1Q9Y6B2 187 aa8.19□□□□□ -1.1
CDH8-213ENST00000584966 ADGRF5Q8IZF2 1346 aa8.19□□□□□ -1.1
CDH8-213ENST00000584966 MYOM2P54296 1465 aa8.19□□□□□ -1.1
CDH8-213ENST00000584966 ALKQ9UM73 1620 aa8.18□□□□□ -1.1
CDH8-213ENST00000584966 KIAA1210Q9ULL0 1709 aa8.18□□□□□ -1.1
CDH8-213ENST00000584966 ALDH1A1P00352 501 aa8.18□□□□□ -1.1
CDH8-213ENST00000584966 GCGRP47871 477 aa8.18□□□□□ -1.1
CDH8-213ENST00000584966 TRIM46Q7Z4K8 759 aa8.18□□□□□ -1.1
CDH8-213ENST00000584966 NLRP7Q8WX94 980 aa8.18□□□□□ -1.1
CDH8-213ENST00000584966 DIP2AQ14689 1571 aa8.18□□□□□ -1.1
CDH8-213ENST00000584966 SKOR1P84550 965 aa8.17□□□□□ -1.1
CDH8-213ENST00000584966 NEUROD1Q13562 356 aa8.17□□□□□ -1.1
CDH8-213ENST00000584966 L3MBTL2Q969R5 705 aa8.17□□□□□ -1.1
CDH8-213ENST00000584966 SLC26A8Q96RN1 970 aa8.17□□□□□ -1.1
CDH8-213ENST00000584966 TBX22Q9Y458 520 aa8.17□□□□□ -1.1
CDH8-213ENST00000584966 CLSPNQ9HAW4 1339 aa8.17□□□□□ -1.1
CDH8-213ENST00000584966 PIK3C2GO75747 1445 aa8.17□□□□□ -1.1
CDH8-213ENST00000584966 ASXL1Q8IXJ9 1541 aa8.17□□□□□ -1.1
CDH8-213ENST00000584966 MMP16P51512 607 aa8.16□□□□□ -1.1
CDH8-213ENST00000584966 NWD1Q149M9 1564 aa8.16□□□□□ -1.1
CDH8-213ENST00000584966 XRN1Q8IZH2 1706 aaKnown RBP8.16□□□□□ -1.1
CDH8-213ENST00000584966 CCDC24Q8N4L8 307 aa8.16□□□□□ -1.1
CDH8-213ENST00000584966 PTPRUQ92729 1446 aa8.16□□□□□ -1.1
CDH8-213ENST00000584966 LAMC1P11047 1609 aa8.15□□□□□ -1.1
CDH8-213ENST00000584966 TRPM1Q7Z4N2 1603 aa8.15□□□□□ -1.1
CDH8-213ENST00000584966 METP08581 1390 aa8.15□□□□□ -1.1
CDH8-213ENST00000584966 ZNF335Q9H4Z2 1342 aaPredicted RBP8.15□□□□□ -1.1
CDH8-213ENST00000584966 NEUROD2Q15784 382 aa8.15□□□□□ -1.1
CDH8-213ENST00000584966 BARGINQ6ZT62 677 aa8.15□□□□□ -1.1
CDH8-213ENST00000584966 KCTD17Q8N5Z5 321 aa8.15□□□□□ -1.1
CDH8-213ENST00000584966 DCAF11Q8TEB1 546 aa8.15□□□□□ -1.1
CDH8-213ENST00000584966 KNDC1Q76NI1 1749 aa8.15□□□□□ -1.11
CDH8-213ENST00000584966 CAPN5O15484 640 aaPredicted RBP8.14□□□□□ -1.11
CDH8-213ENST00000584966 PPP1R15AO75807 674 aaPredicted RBP8.14□□□□□ -1.11
CDH8-213ENST00000584966 C14orf93Q9H972 538 aaKnown RBP8.14□□□□□ -1.11
CDH8-213ENST00000584966 ADGRB1O14514 1584 aa8.14□□□□□ -1.11
CDH8-213ENST00000584966 PRAG1Q86YV5 1406 aa8.13□□□□□ -1.11
CDH8-213ENST00000584966 HIC1Q14526 733 aa8.13□□□□□ -1.11
CDH8-213ENST00000584966 NBPF8Q3BBV2 869 aa8.13□□□□□ -1.11
CDH8-213ENST00000584966 CFAP70Q5T0N1 1121 aa8.13□□□□□ -1.11
CDH8-213ENST00000584966 CCER1Q8TC90 406 aaPredicted RBP8.13□□□□□ -1.11
CDH8-213ENST00000584966 PIK3R4Q99570 1358 aa8.12□□□□□ -1.11
CDH8-213ENST00000584966 KCNA6P17658 529 aa8.12□□□□□ -1.11
CDH8-213ENST00000584966 WNT7BP56706 349 aa8.12□□□□□ -1.11
CDH8-213ENST00000584966 GRIPAP1Q4V328 841 aa8.12□□□□□ -1.11
CDH8-213ENST00000584966 SULF1Q8IWU6 871 aa8.12□□□□□ -1.11
CDH8-213ENST00000584966 LRRC7Q96NW7 1537 aa8.12□□□□□ -1.11
CDH8-213ENST00000584966 ARHGEF28Q8N1W1 1705 aaKnown RBP8.12□□□□□ -1.11
CDH8-213ENST00000584966 DXOO77932 396 aaKnown RBP8.11□□□□□ -1.11
CDH8-213ENST00000584966 Q3C1V9 767 aa8.11□□□□□ -1.11
CDH8-213ENST00000584966 TMEM132EQ6IEE7 984 aa8.11□□□□□ -1.11
CDH8-213ENST00000584966 CPS1P31327 1500 aa8.11□□□□□ -1.11
CDH8-213ENST00000584966 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.11□□□□□ -1.11
CDH8-213ENST00000584966 NBPF1Q3BBV0 1214 aa8.1□□□□□ -1.11
CDH8-213ENST00000584966 RBM26Q5T8P6 1007 aaKnown RBP8.1□□□□□ -1.11
CDH8-213ENST00000584966 ZFP42Q96MM3 310 aa8.1□□□□□ -1.11
CDH8-213ENST00000584966 USB1Q9BQ65 265 aaKnown RBP8.1□□□□□ -1.11
CDH8-213ENST00000584966 AMOTL2Q9Y2J4 779 aa8.1□□□□□ -1.11
CDH8-213ENST00000584966 WASF2Q9Y6W5 498 aa8.1□□□□□ -1.11
CDH8-213ENST00000584966 TONSLQ96HA7 1378 aa8.1□□□□□ -1.11
CDH8-213ENST00000584966 NALCNQ8IZF0 1738 aa8.09□□□□□ -1.11
CDH8-213ENST00000584966 NKTRP30414 1462 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms