RNA–Protein interactions for RNA: ENST00000584878.1

NLK-206, Transcript of nemo like kinase, humanhuman

TSL 1 (best)

Gene NLK, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-206ENST00000584878 INSM1Q01101 510 aaPredicted RBP9.68□□□□□ -0.86
NLK-206ENST00000584878 TMEM214Q6NUQ4 689 aaKnown RBP9.68□□□□□ -0.86
NLK-206ENST00000584878 USP17L2Q6R6M4 530 aa9.68□□□□□ -0.86
NLK-206ENST00000584878 USP17L1Q7RTZ2 530 aa9.68□□□□□ -0.86
NLK-206ENST00000584878 COL25A1Q9BXS0 654 aaPredicted RBP9.68□□□□□ -0.86
NLK-206ENST00000584878 TIMMDC1Q9NPL8 285 aa9.68□□□□□ -0.86
NLK-206ENST00000584878 NOD1Q9Y239 953 aa9.68□□□□□ -0.86
NLK-206ENST00000584878 PSME1Q06323 249 aa9.67□□□□□ -0.86
NLK-206ENST00000584878 C4orf17Q53FE4 359 aa9.67□□□□□ -0.86
NLK-206ENST00000584878 RNFT1Q5M7Z0 435 aa9.67□□□□□ -0.86
NLK-206ENST00000584878 SV2AQ7L0J3 742 aa9.67□□□□□ -0.86
NLK-206ENST00000584878 CNTNAP3BQ96NU0 1288 aa9.67□□□□□ -0.86
NLK-206ENST00000584878 CNTNAP3Q9BZ76 1288 aa9.67□□□□□ -0.86
NLK-206ENST00000584878 DYRK1BQ9Y463 629 aa9.67□□□□□ -0.86
NLK-206ENST00000584878 ATP9BO43861 1147 aa9.66□□□□□ -0.86
NLK-206ENST00000584878 ZNF837Q96EG3 531 aaPredicted RBP9.66□□□□□ -0.86
NLK-206ENST00000584878 GPAMQ9HCL2 828 aa9.66□□□□□ -0.86
NLK-206ENST00000584878 DBN1Q16643 649 aa9.65□□□□□ -0.86
NLK-206ENST00000584878 GNASQ5JWF2 1037 aa9.65□□□□□ -0.86
NLK-206ENST00000584878 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.65□□□□□ -0.86
NLK-206ENST00000584878 CALR3Q96L12 384 aaKnown RBP9.65□□□□□ -0.86
NLK-206ENST00000584878 KIAA1024Q9UPX6 916 aa9.65□□□□□ -0.86
NLK-206ENST00000584878 USP3Q9Y6I4 520 aa9.65□□□□□ -0.86
NLK-206ENST00000584878 GPR25O00155 361 aa9.64□□□□□ -0.87
NLK-206ENST00000584878 GTF2E1P29083 439 aaPredicted RBP9.64□□□□□ -0.87
NLK-206ENST00000584878 TFIP11Q9UBB9 837 aaKnown RBP9.64□□□□□ -0.87
NLK-206ENST00000584878 LZTS3O60299 673 aaPredicted RBP9.63□□□□□ -0.87
NLK-206ENST00000584878 PLA2G4AP47712 749 aa9.63□□□□□ -0.87
NLK-206ENST00000584878 SMTNP53814 917 aa9.63□□□□□ -0.87
NLK-206ENST00000584878 CLDN10P78369 228 aa9.63□□□□□ -0.87
NLK-206ENST00000584878 WDR44Q5JSH3 913 aa9.63□□□□□ -0.87
NLK-206ENST00000584878 PPARGC1BQ86YN6 1023 aaKnown RBP9.63□□□□□ -0.87
NLK-206ENST00000584878 PLEKHM2Q8IWE5 1019 aa9.63□□□□□ -0.87
NLK-206ENST00000584878 TRIM22Q8IYM9 498 aa9.63□□□□□ -0.87
NLK-206ENST00000584878 ZSCAN1Q8NBB4 408 aa9.63□□□□□ -0.87
NLK-206ENST00000584878 RHBDD1Q8TEB9 315 aa9.63□□□□□ -0.87
NLK-206ENST00000584878 ZNF777Q9ULD5 760 aaPredicted RBP9.63□□□□□ -0.87
NLK-206ENST00000584878 GTPBP3Q969Y2 492 aaKnown RBP9.62□□□□□ -0.87
NLK-206ENST00000584878 ZNF358Q9NW07 568 aa9.62□□□□□ -0.87
NLK-206ENST00000584878 PALM3A6NDB9 673 aaPredicted RBP9.61□□□□□ -0.87
NLK-206ENST00000584878 THBS1P07996 1170 aa9.61□□□□□ -0.87
NLK-206ENST00000584878 TPCN2Q8NHX9 752 aa9.61□□□□□ -0.87
NLK-206ENST00000584878 MKRN1Q9UHC7 482 aaKnown RBP9.61□□□□□ -0.87
NLK-206ENST00000584878 MAFBQ9Y5Q3 323 aaPredicted RBP9.61□□□□□ -0.87
NLK-206ENST00000584878 A6NJY4 79 aa9.6□□□□□ -0.87
NLK-206ENST00000584878 ZBTB7BO15156 539 aaPredicted RBP9.6□□□□□ -0.87
NLK-206ENST00000584878 F11P03951 625 aa9.6□□□□□ -0.87
NLK-206ENST00000584878 GAS6Q14393 721 aa9.6□□□□□ -0.87
NLK-206ENST00000584878 ZNF594Q96JF6 807 aaPredicted RBP9.6□□□□□ -0.87
NLK-206ENST00000584878 RUBCNLQ9H714 662 aa9.6□□□□□ -0.87
NLK-206ENST00000584878 A0A1B0GTH6 734 aa9.59□□□□□ -0.87
NLK-206ENST00000584878 TRIM50Q86XT4 487 aa9.59□□□□□ -0.87
NLK-206ENST00000584878 OGFOD1Q8N543 542 aa9.59□□□□□ -0.87
NLK-206ENST00000584878 SLC4A9Q96Q91 983 aa9.59□□□□□ -0.87
NLK-206ENST00000584878 PPP1R12CQ9BZL4 782 aa9.59□□□□□ -0.87
NLK-206ENST00000584878 NUCKS1Q9H1E3 243 aaKnown RBP9.59□□□□□ -0.87
NLK-206ENST00000584878 STK17AQ9UEE5 414 aa9.59□□□□□ -0.87
NLK-206ENST00000584878 IQSEC3Q9UPP2 1182 aaPredicted RBP9.59□□□□□ -0.87
NLK-206ENST00000584878 MSX1P28360 303 aa9.58□□□□□ -0.88
NLK-206ENST00000584878 MTFR1Q15390 333 aa9.58□□□□□ -0.88
NLK-206ENST00000584878 TBCELQ5QJ74 424 aa9.58□□□□□ -0.88
NLK-206ENST00000584878 CCDC102BQ68D86 513 aa9.58□□□□□ -0.88
NLK-206ENST00000584878 ZNF295-AS1Q8N0V1 137 aa9.58□□□□□ -0.88
NLK-206ENST00000584878 DNAAF2Q9NVR5 837 aaKnown RBP9.58□□□□□ -0.88
NLK-206ENST00000584878 H7C1W4 665 aa9.57□□□□□ -0.88
NLK-206ENST00000584878 TNS4Q8IZW8 715 aa9.57□□□□□ -0.88
NLK-206ENST00000584878 NIFKQ9BYG3 293 aaKnown RBP9.57□□□□□ -0.88
NLK-206ENST00000584878 PARP3Q9Y6F1 533 aa9.57□□□□□ -0.88
NLK-206ENST00000584878 ATP1A2P50993 1020 aa9.56□□□□□ -0.88
NLK-206ENST00000584878 AIDAQ96BJ3 306 aa9.56□□□□□ -0.88
NLK-206ENST00000584878 CABP1Q9NZU7 370 aa9.56□□□□□ -0.88
NLK-206ENST00000584878 GTF3C3Q9Y5Q9 886 aa9.56□□□□□ -0.88
NLK-206ENST00000584878 SFI1A8K8P3 1242 aa9.55□□□□□ -0.88
NLK-206ENST00000584878 CDK2AP1O14519 115 aa9.55□□□□□ -0.88
NLK-206ENST00000584878 BACH1O14867 736 aa9.55□□□□□ -0.88
NLK-206ENST00000584878 ATP4AP20648 1035 aa9.55□□□□□ -0.88
NLK-206ENST00000584878 LMOD1P29536 600 aaPredicted RBP9.55□□□□□ -0.88
NLK-206ENST00000584878 EPHA4P54764 986 aa9.55□□□□□ -0.88
NLK-206ENST00000584878 WHAMMQ8TF30 809 aa9.55□□□□□ -0.88
NLK-206ENST00000584878 GMCL1Q96IK5 515 aa9.55□□□□□ -0.88
NLK-206ENST00000584878 SCHIP1Q9P0W5 487 aaPredicted RBP9.55□□□□□ -0.88
NLK-206ENST00000584878 RASA1P20936 1047 aa9.54□□□□□ -0.88
NLK-206ENST00000584878 SLC9A9Q8IVB4 645 aa9.54□□□□□ -0.88
NLK-206ENST00000584878 DKK1O94907 266 aa9.53□□□□□ -0.88
NLK-206ENST00000584878 ADAMTS2O95450 1211 aa9.53□□□□□ -0.88
NLK-206ENST00000584878 CSB-PGBD3P0DP91 1061 aa9.53□□□□□ -0.88
NLK-206ENST00000584878 PGBD3Q8N328 593 aa9.53□□□□□ -0.88
NLK-206ENST00000584878 LARGE2Q8N3Y3 721 aa9.53□□□□□ -0.88
NLK-206ENST00000584878 ZDHHC1Q8WTX9 485 aa9.53□□□□□ -0.88
NLK-206ENST00000584878 FOXK2Q01167 660 aa9.52□□□□□ -0.89
NLK-206ENST00000584878 UBAP2LQ14157 1087 aaKnown RBP9.52□□□□□ -0.89
NLK-206ENST00000584878 CRTC2Q53ET0 693 aaPredicted RBP9.52□□□□□ -0.89
NLK-206ENST00000584878 KANK4Q5T7N3 995 aaPredicted RBP9.52□□□□□ -0.89
NLK-206ENST00000584878 SH3PXD2AQ5TCZ1 1133 aa9.52□□□□□ -0.89
NLK-206ENST00000584878 FOXR1Q6PIV2 292 aa9.52□□□□□ -0.89
NLK-206ENST00000584878 SIX5Q8N196 739 aa9.52□□□□□ -0.89
NLK-206ENST00000584878 TSEN2Q8NCE0 465 aaKnown RBP9.52□□□□□ -0.89
NLK-206ENST00000584878 TRERF1Q96PN7 1200 aa9.52□□□□□ -0.89
NLK-206ENST00000584878 LGR5O75473 907 aa9.51□□□□□ -0.89
NLK-206ENST00000584878 TXLNAP40222 546 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms