RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 MPRIPQ6WCQ1 1025 aa18.01■□□□□ 0.47
SREBF1-223ENST00000584760 FLAD1Q8NFF5 587 aa18.01■□□□□ 0.47
SREBF1-223ENST00000584760 ZNF526Q8TF50 670 aaPredicted RBP18.01■□□□□ 0.47
SREBF1-223ENST00000584760 PALLDQ8WX93 1383 aa18■□□□□ 0.47
SREBF1-223ENST00000584760 DIAPH1O60610 1272 aaKnown RBP17.99■□□□□ 0.47
SREBF1-223ENST00000584760 AMOTQ4VCS5 1084 aa17.99■□□□□ 0.47
SREBF1-223ENST00000584760 PLEKHO1Q53GL0 409 aaPredicted RBP17.99■□□□□ 0.47
SREBF1-223ENST00000584760 WWC3Q9ULE0 1092 aa17.99■□□□□ 0.47
SREBF1-223ENST00000584760 ADAMTS7Q9UKP4 1686 aa17.99■□□□□ 0.47
SREBF1-223ENST00000584760 C4BP0C0L5 1744 aa17.98■□□□□ 0.47
SREBF1-223ENST00000584760 ZNF530Q6P9A1 599 aaPredicted RBP17.98■□□□□ 0.47
SREBF1-223ENST00000584760 SMIM5Q71RC9 77 aa17.98■□□□□ 0.47
SREBF1-223ENST00000584760 PIGBQ92521 554 aa17.98■□□□□ 0.47
SREBF1-223ENST00000584760 ZNF831Q5JPB2 1677 aa17.98■□□□□ 0.47
SREBF1-223ENST00000584760 GOLGB1Q14789 3259 aaKnown RBP17.98■□□□□ 0.47
SREBF1-223ENST00000584760 HMGB2P26583 209 aaKnown RBP17.97■□□□□ 0.47
SREBF1-223ENST00000584760 AK7Q96M32 723 aa17.97■□□□□ 0.47
SREBF1-223ENST00000584760 UBR3Q6ZT12 1888 aa17.97■□□□□ 0.47
SREBF1-223ENST00000584760 PHF14O94880 888 aa17.96■□□□□ 0.47
SREBF1-223ENST00000584760 HMOX1P09601 288 aa17.96■□□□□ 0.47
SREBF1-223ENST00000584760 DCAF5Q96JK2 942 aa17.96■□□□□ 0.47
SREBF1-223ENST00000584760 TMOD3Q9NYL9 352 aa17.96■□□□□ 0.47
SREBF1-223ENST00000584760 HSP90AB1P08238 724 aaKnown RBP17.95■□□□□ 0.46
SREBF1-223ENST00000584760 PPP2R1AP30153 589 aa17.95■□□□□ 0.46
SREBF1-223ENST00000584760 AMIGO3Q86WK7 504 aa17.95■□□□□ 0.46
SREBF1-223ENST00000584760 SMARCC1Q92922 1105 aaPredicted RBP17.95■□□□□ 0.46
SREBF1-223ENST00000584760 COL5A3P25940 1745 aaPredicted RBP17.95■□□□□ 0.46
SREBF1-223ENST00000584760 MRC1P22897 1456 aa17.95■□□□□ 0.46
SREBF1-223ENST00000584760 HSPA6P17066 643 aa17.94■□□□□ 0.46
SREBF1-223ENST00000584760 CICQ96RK0 1608 aaPredicted RBP17.94■□□□□ 0.46
SREBF1-223ENST00000584760 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.93■□□□□ 0.46
SREBF1-223ENST00000584760 ERVV-2B6SEH9 535 aa17.93■□□□□ 0.46
SREBF1-223ENST00000584760 C1orf141Q5JVX7 400 aa17.93■□□□□ 0.46
SREBF1-223ENST00000584760 ADCY9O60503 1353 aa17.92■□□□□ 0.46
SREBF1-223ENST00000584760 ASAP1Q9ULH1 1129 aa17.92■□□□□ 0.46
SREBF1-223ENST00000584760 SIPA1L3O60292 1781 aaPredicted RBP17.9■□□□□ 0.46
SREBF1-223ENST00000584760 CFAP53Q96M91 514 aa17.9■□□□□ 0.46
SREBF1-223ENST00000584760 ATG3Q9NT62 314 aa17.9■□□□□ 0.46
SREBF1-223ENST00000584760 CEP350Q5VT06 3117 aa17.9■□□□□ 0.46
SREBF1-223ENST00000584760 TJP1Q07157 1748 aa17.89■□□□□ 0.46
SREBF1-223ENST00000584760 LOC102724428A0A0B4J2F2 783 aa17.89■□□□□ 0.45
SREBF1-223ENST00000584760 U2SURPO15042 1029 aaKnown RBP17.89■□□□□ 0.45
SREBF1-223ENST00000584760 SIK1P57059 783 aa17.89■□□□□ 0.45
SREBF1-223ENST00000584760 AKAP4Q5JQC9 854 aa17.89■□□□□ 0.45
SREBF1-223ENST00000584760 MTHFSDQ2M296 383 aaKnown RBP17.88■□□□□ 0.45
SREBF1-223ENST00000584760 LINC00116Q8NCU8 138 aa17.88■□□□□ 0.45
SREBF1-223ENST00000584760 UBR2Q8IWV8 1755 aa17.88■□□□□ 0.45
SREBF1-223ENST00000584760 SSFA2P28290 1259 aa17.87■□□□□ 0.45
SREBF1-223ENST00000584760 CABP4P57796 275 aa17.87■□□□□ 0.45
SREBF1-223ENST00000584760 GNPATO15228 680 aa17.86■□□□□ 0.45
SREBF1-223ENST00000584760 ITPK1Q13572 414 aa17.86■□□□□ 0.45
SREBF1-223ENST00000584760 RSPH6AQ9H0K4 717 aa17.86■□□□□ 0.45
SREBF1-223ENST00000584760 MYH14Q7Z406 1995 aaKnown RBP17.86■□□□□ 0.45
SREBF1-223ENST00000584760 KIF3CO14782 793 aa17.85■□□□□ 0.45
SREBF1-223ENST00000584760 ATP6V1AP38606 617 aa17.84■□□□□ 0.45
SREBF1-223ENST00000584760 DDX10Q13206 875 aaKnown RBP17.84■□□□□ 0.45
SREBF1-223ENST00000584760 NFATC2IPQ8NCF5 419 aa17.84■□□□□ 0.45
SREBF1-223ENST00000584760 SLC4A9Q96Q91 983 aa17.84■□□□□ 0.45
SREBF1-223ENST00000584760 LGR6Q9HBX8 967 aa17.84■□□□□ 0.45
SREBF1-223ENST00000584760 C4AP0C0L4 1744 aa17.84■□□□□ 0.45
SREBF1-223ENST00000584760 KCPQ6ZWJ8 1503 aa17.83■□□□□ 0.45
SREBF1-223ENST00000584760 DLG5Q8TDM6 1919 aa17.83■□□□□ 0.44
SREBF1-223ENST00000584760 RNMTO43148 476 aaKnown RBP17.83■□□□□ 0.44
SREBF1-223ENST00000584760 MMP10P09238 476 aa17.83■□□□□ 0.44
SREBF1-223ENST00000584760 ZEB1P37275 1124 aaPredicted RBP17.83■□□□□ 0.44
SREBF1-223ENST00000584760 NUDCQ9Y266 331 aa17.83■□□□□ 0.44
SREBF1-223ENST00000584760 PRKAR2BP31323 418 aa17.82■□□□□ 0.44
SREBF1-223ENST00000584760 GAS2L2Q8NHY3 880 aa17.82■□□□□ 0.44
SREBF1-223ENST00000584760 SLC52A2Q9HAB3 445 aa17.82■□□□□ 0.44
SREBF1-223ENST00000584760 BCS1LQ9Y276 419 aa17.81■□□□□ 0.44
SREBF1-223ENST00000584760 A0A0G2JLW4 131 aa17.8■□□□□ 0.44
SREBF1-223ENST00000584760 U2AF1L5P0DN76 240 aaPredicted RBP17.8■□□□□ 0.44
SREBF1-223ENST00000584760 U2AF1Q01081 240 aaKnown RBP eCLIP17.8■□□□□ 0.44
SREBF1-223ENST00000584760 PHACTR3Q96KR7 559 aa17.8■□□□□ 0.44
SREBF1-223ENST00000584760 RBM42Q9BTD8 480 aaKnown RBP17.8■□□□□ 0.44
SREBF1-223ENST00000584760 RALBP1Q15311 655 aa17.79■□□□□ 0.44
SREBF1-223ENST00000584760 TRAPPC3LQ5T215 181 aa17.79■□□□□ 0.44
SREBF1-223ENST00000584760 ARHGAP27Q6ZUM4 889 aa17.79■□□□□ 0.44
SREBF1-223ENST00000584760 CEMIPQ8WUJ3 1361 aa17.79■□□□□ 0.44
SREBF1-223ENST00000584760 CNTNAP4Q9C0A0 1308 aa17.78■□□□□ 0.44
SREBF1-223ENST00000584760 GNAT3A8MTJ3 354 aa17.78■□□□□ 0.44
SREBF1-223ENST00000584760 PTCD1O75127 700 aaKnown RBP17.78■□□□□ 0.44
SREBF1-223ENST00000584760 FCHSD2O94868 740 aa17.78■□□□□ 0.44
SREBF1-223ENST00000584760 APLP1P51693 650 aa17.78■□□□□ 0.44
SREBF1-223ENST00000584760 TGFB2P61812 414 aa17.78■□□□□ 0.44
SREBF1-223ENST00000584760 RTCBQ9Y3I0 505 aaKnown RBP17.78■□□□□ 0.44
SREBF1-223ENST00000584760 TOMM70O94826 608 aa17.77■□□□□ 0.44
SREBF1-223ENST00000584760 NLGN1Q8N2Q7 840 aa17.77■□□□□ 0.44
SREBF1-223ENST00000584760 IL17REQ8NFR9 667 aa17.77■□□□□ 0.44
SREBF1-223ENST00000584760 PXDNLA1KZ92 1463 aa17.76■□□□□ 0.43
SREBF1-223ENST00000584760 DPEP1P16444 411 aa17.75■□□□□ 0.43
SREBF1-223ENST00000584760 SLC39A6Q13433 755 aa17.75■□□□□ 0.43
SREBF1-223ENST00000584760 RC3H1Q5TC82 1133 aaKnown RBP17.75■□□□□ 0.43
SREBF1-223ENST00000584760 ARHGEF1Q92888 912 aaKnown RBP17.75■□□□□ 0.43
SREBF1-223ENST00000584760 NMRK2Q9NPI5 230 aa17.75■□□□□ 0.43
SREBF1-223ENST00000584760 DNAJC5GQ8N7S2 189 aa17.74■□□□□ 0.43
SREBF1-223ENST00000584760 CCDC87Q9NVE4 849 aa17.74■□□□□ 0.43
SREBF1-223ENST00000584760 MYBBP1AQ9BQG0 1328 aaKnown RBP17.73■□□□□ 0.43
SREBF1-223ENST00000584760 GYS1P13807 737 aa17.72■□□□□ 0.43
SREBF1-223ENST00000584760 RFC4P35249 363 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms