RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 CEP350Q5VT06 3117 aa22.83■■□□□ 1.25
CCDC57-219ENST00000584717 CLSPNQ9HAW4 1339 aa22.82■■□□□ 1.24
CCDC57-219ENST00000584717 KDRP35968 1356 aa22.8■■□□□ 1.24
CCDC57-219ENST00000584717 HSPA5P11021 654 aaKnown RBP22.8■■□□□ 1.24
CCDC57-219ENST00000584717 PANK3Q9H999 370 aa22.8■■□□□ 1.24
CCDC57-219ENST00000584717 PLEKHG2Q9H7P9 1386 aa22.79■■□□□ 1.24
CCDC57-219ENST00000584717 EIF4G2P78344 907 aaKnown RBP eCLIP22.79■■□□□ 1.24
CCDC57-219ENST00000584717 ADCY9O60503 1353 aa22.78■■□□□ 1.24
CCDC57-219ENST00000584717 SLC4A9Q96Q91 983 aa22.78■■□□□ 1.24
CCDC57-219ENST00000584717 RBM42Q9BTD8 480 aaKnown RBP22.78■■□□□ 1.24
CCDC57-219ENST00000584717 ERVV-2B6SEH9 535 aa22.77■■□□□ 1.24
CCDC57-219ENST00000584717 MMP10P09238 476 aa22.77■■□□□ 1.24
CCDC57-219ENST00000584717 ZNF526Q8TF50 670 aaPredicted RBP22.77■■□□□ 1.24
CCDC57-219ENST00000584717 KDM6AO15550 1401 aaPredicted RBP22.76■■□□□ 1.23
CCDC57-219ENST00000584717 PLEKHO1Q53GL0 409 aaPredicted RBP22.76■■□□□ 1.23
CCDC57-219ENST00000584717 ZNF530Q6P9A1 599 aaPredicted RBP22.76■■□□□ 1.23
CCDC57-219ENST00000584717 DCAF5Q96JK2 942 aa22.76■■□□□ 1.23
CCDC57-219ENST00000584717 GPBP1L1Q9HC44 474 aaPredicted RBP22.76■■□□□ 1.23
CCDC57-219ENST00000584717 RTCBQ9Y3I0 505 aaKnown RBP22.76■■□□□ 1.23
CCDC57-219ENST00000584717 COL5A3P25940 1745 aaPredicted RBP22.76■■□□□ 1.23
CCDC57-219ENST00000584717 ZNF831Q5JPB2 1677 aa22.75■■□□□ 1.23
CCDC57-219ENST00000584717 HSP90AB1P08238 724 aaKnown RBP22.75■■□□□ 1.23
CCDC57-219ENST00000584717 CICQ96RK0 1608 aaPredicted RBP22.75■■□□□ 1.23
CCDC57-219ENST00000584717 TRAPPC3LQ5T215 181 aa22.74■■□□□ 1.23
CCDC57-219ENST00000584717 AEBP1Q8IUX7 1158 aa22.74■■□□□ 1.23
CCDC57-219ENST00000584717 CABP4P57796 275 aa22.73■■□□□ 1.23
CCDC57-219ENST00000584717 MORC1Q86VD1 984 aa22.73■■□□□ 1.23
CCDC57-219ENST00000584717 KIAA1551Q9HCM1 1747 aa22.73■■□□□ 1.23
CCDC57-219ENST00000584717 KIF13BQ9NQT8 1826 aa22.73■■□□□ 1.23
CCDC57-219ENST00000584717 PXDNLA1KZ92 1463 aa22.73■■□□□ 1.23
CCDC57-219ENST00000584717 N4BP2Q86UW6 1770 aaPredicted RBP22.72■■□□□ 1.23
CCDC57-219ENST00000584717 AMOTQ4VCS5 1084 aa22.71■■□□□ 1.23
CCDC57-219ENST00000584717 RC3H1Q5TC82 1133 aaKnown RBP22.7■■□□□ 1.22
CCDC57-219ENST00000584717 ARHGEF1Q92888 912 aaKnown RBP22.7■■□□□ 1.22
CCDC57-219ENST00000584717 CNTNAP4Q9C0A0 1308 aa22.7■■□□□ 1.22
CCDC57-219ENST00000584717 C4AP0C0L4 1744 aa22.7■■□□□ 1.22
CCDC57-219ENST00000584717 MYH14Q7Z406 1995 aaKnown RBP22.69■■□□□ 1.22
CCDC57-219ENST00000584717 C10orf71Q711Q0 1435 aa22.69■■□□□ 1.22
CCDC57-219ENST00000584717 MTHFSP49914 203 aa22.69■■□□□ 1.22
CCDC57-219ENST00000584717 C1orf141Q5JVX7 400 aa22.69■■□□□ 1.22
CCDC57-219ENST00000584717 NLGN1Q8N2Q7 840 aa22.69■■□□□ 1.22
CCDC57-219ENST00000584717 PTCD1O75127 700 aaKnown RBP22.68■■□□□ 1.22
CCDC57-219ENST00000584717 GYS1P13807 737 aa22.68■■□□□ 1.22
CCDC57-219ENST00000584717 ADRA2BP18089 450 aa22.68■■□□□ 1.22
CCDC57-219ENST00000584717 RFC4P35249 363 aa22.68■■□□□ 1.22
CCDC57-219ENST00000584717 SULT6B1Q6IMI4 303 aa22.68■■□□□ 1.22
CCDC57-219ENST00000584717 A0A0G2JLW4 131 aa22.67■■□□□ 1.22
CCDC57-219ENST00000584717 RPS6KA4O75676 772 aa22.67■■□□□ 1.22
CCDC57-219ENST00000584717 NFATC2IPQ8NCF5 419 aa22.66■■□□□ 1.22
CCDC57-219ENST00000584717 BCS1LQ9Y276 419 aa22.66■■□□□ 1.22
CCDC57-219ENST00000584717 TJP1Q07157 1748 aa22.65■■□□□ 1.22
CCDC57-219ENST00000584717 TGFB2P61812 414 aa22.65■■□□□ 1.22
CCDC57-219ENST00000584717 CCDC87Q9NVE4 849 aa22.65■■□□□ 1.22
CCDC57-219ENST00000584717 KNSTRNQ9Y448 316 aa22.65■■□□□ 1.22
CCDC57-219ENST00000584717 PARP3Q9Y6F1 533 aa22.64■■□□□ 1.21
CCDC57-219ENST00000584717 SCN11AQ9UI33 1791 aa22.63■■□□□ 1.21
CCDC57-219ENST00000584717 DPEP1P16444 411 aa22.63■■□□□ 1.21
CCDC57-219ENST00000584717 IL13P35225 146 aa22.63■■□□□ 1.21
CCDC57-219ENST00000584717 CRKLP46109 303 aaKnown RBP22.63■■□□□ 1.21
CCDC57-219ENST00000584717 CCER1Q8TC90 406 aaPredicted RBP22.63■■□□□ 1.21
CCDC57-219ENST00000584717 SRP68Q9UHB9 627 aaKnown RBP22.62■■□□□ 1.21
CCDC57-219ENST00000584717 BRCA1P38398 1863 aaKnown RBP22.61■■□□□ 1.21
CCDC57-219ENST00000584717 KIF3CO14782 793 aa22.6■■□□□ 1.21
CCDC57-219ENST00000584717 HSPA6P17066 643 aa22.6■■□□□ 1.21
CCDC57-219ENST00000584717 FCHSD2O94868 740 aa22.59■■□□□ 1.21
CCDC57-219ENST00000584717 ARHGAP27Q6ZUM4 889 aa22.59■■□□□ 1.21
CCDC57-219ENST00000584717 USP42Q9H9J4 1324 aaKnown RBP22.58■■□□□ 1.21
CCDC57-219ENST00000584717 FKBP8Q14318 412 aa22.58■■□□□ 1.21
CCDC57-219ENST00000584717 AMER1Q5JTC6 1135 aaPredicted RBP22.58■■□□□ 1.21
CCDC57-219ENST00000584717 AKAP4Q5JQC9 854 aa22.57■■□□□ 1.2
CCDC57-219ENST00000584717 DDR1Q08345 913 aa22.56■■□□□ 1.2
CCDC57-219ENST00000584717 INTS5Q6P9B9 1019 aaKnown RBP22.56■■□□□ 1.2
CCDC57-219ENST00000584717 LGR6Q9HBX8 967 aa22.56■■□□□ 1.2
CCDC57-219ENST00000584717 ADAMTS7Q9UKP4 1686 aa22.55■■□□□ 1.2
CCDC57-219ENST00000584717 VIRMAQ69YN4 1812 aaKnown RBP22.55■■□□□ 1.2
CCDC57-219ENST00000584717 HMOX1P09601 288 aa22.55■■□□□ 1.2
CCDC57-219ENST00000584717 KCNA3P22001 575 aa22.55■■□□□ 1.2
CCDC57-219ENST00000584717 DNAJC10Q8IXB1 793 aa22.55■■□□□ 1.2
CCDC57-219ENST00000584717 SLC52A2Q9HAB3 445 aa22.55■■□□□ 1.2
CCDC57-219ENST00000584717 ARFGEF1Q9Y6D6 1849 aa22.54■■□□□ 1.2
CCDC57-219ENST00000584717 KIF7Q2M1P5 1343 aa22.54■■□□□ 1.2
CCDC57-219ENST00000584717 MRC1P22897 1456 aa22.54■■□□□ 1.2
CCDC57-219ENST00000584717 SLC39A6Q13433 755 aa22.53■■□□□ 1.2
CCDC57-219ENST00000584717 RNMTO43148 476 aaKnown RBP22.52■■□□□ 1.2
CCDC57-219ENST00000584717 PIM2Q9P1W9 311 aa22.52■■□□□ 1.2
CCDC57-219ENST00000584717 CHRNA5P30532 468 aa22.51■■□□□ 1.19
CCDC57-219ENST00000584717 USPL1Q5W0Q7 1092 aa22.51■■□□□ 1.19
CCDC57-219ENST00000584717 KCPQ6ZWJ8 1503 aa22.51■■□□□ 1.19
CCDC57-219ENST00000584717 POLRMTO00411 1230 aaKnown RBP22.5■■□□□ 1.19
CCDC57-219ENST00000584717 ZPR1O75312 459 aa22.5■■□□□ 1.19
CCDC57-219ENST00000584717 C9orf131Q5VYM1 1079 aa22.5■■□□□ 1.19
CCDC57-219ENST00000584717 NMRK2Q9NPI5 230 aa22.5■■□□□ 1.19
CCDC57-219ENST00000584717 SOS1Q07889 1333 aaPredicted RBP22.5■■□□□ 1.19
CCDC57-219ENST00000584717 CYP19A1P11511 503 aaPredicted RBP22.49■■□□□ 1.19
CCDC57-219ENST00000584717 DALRD3Q5D0E6 543 aaKnown RBP22.49■■□□□ 1.19
CCDC57-219ENST00000584717 TM4SF1P30408 202 aa22.48■■□□□ 1.19
CCDC57-219ENST00000584717 MTHFSDQ2M296 383 aaKnown RBP22.48■■□□□ 1.19
CCDC57-219ENST00000584717 CC2D1BQ5T0F9 858 aaKnown RBP22.48■■□□□ 1.19
CCDC57-219ENST00000584717 COL15A1P39059 1388 aa22.47■■□□□ 1.19
CCDC57-219ENST00000584717 AFDNP55196 1824 aaKnown RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms