RNA–Protein interactions for RNA: ENST00000584645.1

LIMD2-212, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-212ENST00000584645 UBR3Q6ZT12 1888 aa22.22■■□□□ 1.15
LIMD2-212ENST00000584645 MRC1P22897 1456 aa22.22■■□□□ 1.15
LIMD2-212ENST00000584645 PPP2R1AP30153 589 aa22.21■■□□□ 1.15
LIMD2-212ENST00000584645 AK7Q96M32 723 aa22.2■■□□□ 1.14
LIMD2-212ENST00000584645 MAP3K5Q99683 1374 aa22.2■■□□□ 1.14
LIMD2-212ENST00000584645 CICQ96RK0 1608 aaPredicted RBP22.2■■□□□ 1.14
LIMD2-212ENST00000584645 U2SURPO15042 1029 aaKnown RBP22.19■■□□□ 1.14
LIMD2-212ENST00000584645 ATP6V1AP38606 617 aa22.19■■□□□ 1.14
LIMD2-212ENST00000584645 COL23A1Q86Y22 540 aaPredicted RBP22.19■■□□□ 1.14
LIMD2-212ENST00000584645 ARXQ96QS3 562 aa22.19■■□□□ 1.14
LIMD2-212ENST00000584645 COL5A3P25940 1745 aaPredicted RBP22.18■■□□□ 1.14
LIMD2-212ENST00000584645 POLD1P28340 1107 aa22.18■■□□□ 1.14
LIMD2-212ENST00000584645 NUDCQ9Y266 331 aa22.18■■□□□ 1.14
LIMD2-212ENST00000584645 MTHFSDQ2M296 383 aaKnown RBP22.17■■□□□ 1.14
LIMD2-212ENST00000584645 LINC00116Q8NCU8 138 aa22.17■■□□□ 1.14
LIMD2-212ENST00000584645 SSFA2P28290 1259 aa22.16■■□□□ 1.14
LIMD2-212ENST00000584645 ITPK1Q13572 414 aa22.16■■□□□ 1.14
LIMD2-212ENST00000584645 RNMTO43148 476 aaKnown RBP22.15■■□□□ 1.14
LIMD2-212ENST00000584645 MSH5O43196 834 aa22.15■■□□□ 1.14
LIMD2-212ENST00000584645 NFATC2IPQ8NCF5 419 aa22.15■■□□□ 1.14
LIMD2-212ENST00000584645 GAS2L2Q8NHY3 880 aa22.15■■□□□ 1.14
LIMD2-212ENST00000584645 SLC52A2Q9HAB3 445 aa22.15■■□□□ 1.14
LIMD2-212ENST00000584645 FHDC1Q9C0D6 1143 aaPredicted RBP22.14■■□□□ 1.13
LIMD2-212ENST00000584645 DCAF8L1A6NGE4 600 aa22.13■■□□□ 1.13
LIMD2-212ENST00000584645 RBM42Q9BTD8 480 aaKnown RBP22.13■■□□□ 1.13
LIMD2-212ENST00000584645 CNTNAP4Q9C0A0 1308 aa22.12■■□□□ 1.13
LIMD2-212ENST00000584645 RC3H1Q5TC82 1133 aaKnown RBP22.12■■□□□ 1.13
LIMD2-212ENST00000584645 SLC4A9Q96Q91 983 aa22.12■■□□□ 1.13
LIMD2-212ENST00000584645 SYT17Q9BSW7 474 aa22.12■■□□□ 1.13
LIMD2-212ENST00000584645 RSPH6AQ9H0K4 717 aa22.12■■□□□ 1.13
LIMD2-212ENST00000584645 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.11■■□□□ 1.13
LIMD2-212ENST00000584645 LGR6Q9HBX8 967 aa22.11■■□□□ 1.13
LIMD2-212ENST00000584645 TJP1Q07157 1748 aa22.11■■□□□ 1.13
LIMD2-212ENST00000584645 GNPATO15228 680 aa22.1■■□□□ 1.13
LIMD2-212ENST00000584645 PRKAR2BP31323 418 aa22.09■■□□□ 1.13
LIMD2-212ENST00000584645 AMIGO3Q86WK7 504 aa22.09■■□□□ 1.13
LIMD2-212ENST00000584645 UBR2Q8IWV8 1755 aa22.08■■□□□ 1.13
LIMD2-212ENST00000584645 GNAT3A8MTJ3 354 aa22.08■■□□□ 1.13
LIMD2-212ENST00000584645 FCHSD2O94868 740 aa22.08■■□□□ 1.13
LIMD2-212ENST00000584645 PHF14O94880 888 aa22.08■■□□□ 1.13
LIMD2-212ENST00000584645 U2AF1L5P0DN76 240 aaPredicted RBP22.08■■□□□ 1.13
LIMD2-212ENST00000584645 ADRA2BP18089 450 aa22.08■■□□□ 1.13
LIMD2-212ENST00000584645 U2AF1Q01081 240 aaKnown RBP eCLIP22.08■■□□□ 1.13
LIMD2-212ENST00000584645 SIPA1L3O60292 1781 aaPredicted RBP22.07■■□□□ 1.12
LIMD2-212ENST00000584645 PTCD1O75127 700 aaKnown RBP22.07■■□□□ 1.12
LIMD2-212ENST00000584645 RTCBQ9Y3I0 505 aaKnown RBP22.07■■□□□ 1.12
LIMD2-212ENST00000584645 KCPQ6ZWJ8 1503 aa22.06■■□□□ 1.12
LIMD2-212ENST00000584645 ZEB1P37275 1124 aaPredicted RBP22.06■■□□□ 1.12
LIMD2-212ENST00000584645 RALBP1Q15311 655 aa22.06■■□□□ 1.12
LIMD2-212ENST00000584645 MYH14Q7Z406 1995 aaKnown RBP22.06■■□□□ 1.12
LIMD2-212ENST00000584645 MSL1Q68DK7 614 aa22.05■■□□□ 1.12
LIMD2-212ENST00000584645 CEMIPQ8WUJ3 1361 aa22.04■■□□□ 1.12
LIMD2-212ENST00000584645 RPS6KA4O75676 772 aa22.04■■□□□ 1.12
LIMD2-212ENST00000584645 PHACTR3Q96KR7 559 aa22.04■■□□□ 1.12
LIMD2-212ENST00000584645 TEFQ10587 303 aa22.03■■□□□ 1.12
LIMD2-212ENST00000584645 TRAPPC3LQ5T215 181 aa22.03■■□□□ 1.12
LIMD2-212ENST00000584645 VSIG10Q8N0Z9 540 aa22.03■■□□□ 1.12
LIMD2-212ENST00000584645 C4AP0C0L4 1744 aa22.03■■□□□ 1.12
LIMD2-212ENST00000584645 CRKLP46109 303 aaKnown RBP22.02■■□□□ 1.12
LIMD2-212ENST00000584645 DDX10Q13206 875 aaKnown RBP22.02■■□□□ 1.12
LIMD2-212ENST00000584645 IL17REQ8NFR9 667 aa22.02■■□□□ 1.12
LIMD2-212ENST00000584645 SLC39A6Q13433 755 aa22■■□□□ 1.11
LIMD2-212ENST00000584645 SMIM5Q71RC9 77 aa22■■□□□ 1.11
LIMD2-212ENST00000584645 TTC5Q8N0Z6 440 aa22■■□□□ 1.11
LIMD2-212ENST00000584645 KLHL34Q8N239 644 aa22■■□□□ 1.11
LIMD2-212ENST00000584645 NEFMP07197 916 aa21.99■■□□□ 1.11
LIMD2-212ENST00000584645 CD2APQ9Y5K6 639 aa21.99■■□□□ 1.11
LIMD2-212ENST00000584645 HTATSF1O43719 755 aaKnown RBP21.98■■□□□ 1.11
LIMD2-212ENST00000584645 DNAJC10Q8IXB1 793 aa21.98■■□□□ 1.11
LIMD2-212ENST00000584645 ARHGEF1Q92888 912 aaKnown RBP21.98■■□□□ 1.11
LIMD2-212ENST00000584645 RFC4P35249 363 aa21.97■■□□□ 1.11
LIMD2-212ENST00000584645 NLGN1Q8N2Q7 840 aa21.97■■□□□ 1.11
LIMD2-212ENST00000584645 RTF1Q92541 710 aaKnown RBP21.97■■□□□ 1.11
LIMD2-212ENST00000584645 PNNQ9H307 717 aaKnown RBP21.97■■□□□ 1.11
LIMD2-212ENST00000584645 CCDC87Q9NVE4 849 aa21.97■■□□□ 1.11
LIMD2-212ENST00000584645 CYP19A1P11511 503 aaPredicted RBP21.96■■□□□ 1.11
LIMD2-212ENST00000584645 INTS5Q6P9B9 1019 aaKnown RBP21.96■■□□□ 1.11
LIMD2-212ENST00000584645 ZNF790Q6PG37 636 aa21.96■■□□□ 1.11
LIMD2-212ENST00000584645 MYBBP1AQ9BQG0 1328 aaKnown RBP21.96■■□□□ 1.11
LIMD2-212ENST00000584645 NLGN2Q8NFZ4 835 aa21.95■■□□□ 1.1
LIMD2-212ENST00000584645 DLG5Q8TDM6 1919 aa21.94■■□□□ 1.1
LIMD2-212ENST00000584645 TEX13AQ9BXU3 409 aaPredicted RBP21.94■■□□□ 1.1
LIMD2-212ENST00000584645 HEG1Q9ULI3 1381 aa21.94■■□□□ 1.1
LIMD2-212ENST00000584645 GYS1P13807 737 aa21.93■■□□□ 1.1
LIMD2-212ENST00000584645 SOS1Q07889 1333 aaPredicted RBP21.93■■□□□ 1.1
LIMD2-212ENST00000584645 CHD4Q14839 1912 aa21.93■■□□□ 1.1
LIMD2-212ENST00000584645 PLEKHF1Q96S99 279 aa21.93■■□□□ 1.1
LIMD2-212ENST00000584645 KIF13BQ9NQT8 1826 aa21.93■■□□□ 1.1
LIMD2-212ENST00000584645 USP42Q9H9J4 1324 aaKnown RBP21.92■■□□□ 1.1
LIMD2-212ENST00000584645 STARD3NLO95772 234 aa21.92■■□□□ 1.1
LIMD2-212ENST00000584645 MMP10P09238 476 aa21.92■■□□□ 1.1
LIMD2-212ENST00000584645 ZNF496Q96IT1 587 aaPredicted RBP21.92■■□□□ 1.1
LIMD2-212ENST00000584645 FMNL2Q96PY5 1086 aa21.92■■□□□ 1.1
LIMD2-212ENST00000584645 BTBD11A6QL63 1104 aa21.91■■□□□ 1.1
LIMD2-212ENST00000584645 YY1P25490 414 aa21.91■■□□□ 1.1
LIMD2-212ENST00000584645 GPR162Q16538 588 aa21.91■■□□□ 1.1
LIMD2-212ENST00000584645 MCM10Q7L590 875 aa21.9■■□□□ 1.1
LIMD2-212ENST00000584645 COL15A1P39059 1388 aa21.89■■□□□ 1.1
LIMD2-212ENST00000584645 MAPK8IP3Q9UPT6 1336 aa21.89■■□□□ 1.1
LIMD2-212ENST00000584645 ZBTB1Q9Y2K1 713 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms