RNA–Protein interactions for RNA: ENST00000584310.1

SCN4A-203, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

TSL 4

Gene SCN4A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-203ENST00000584310 NFATC2IPQ8NCF5 419 aa19.83■□□□□ 0.77
SCN4A-203ENST00000584310 CASZ1Q86V15 1759 aa19.81■□□□□ 0.76
SCN4A-203ENST00000584310 SSFA2P28290 1259 aa19.81■□□□□ 0.76
SCN4A-203ENST00000584310 TEFQ10587 303 aa19.81■□□□□ 0.76
SCN4A-203ENST00000584310 MTHFSDQ2M296 383 aaKnown RBP19.81■□□□□ 0.76
SCN4A-203ENST00000584310 SLC52A2Q9HAB3 445 aa19.81■□□□□ 0.76
SCN4A-203ENST00000584310 TOGARAM1Q9Y4F4 1720 aa19.8■□□□□ 0.76
SCN4A-203ENST00000584310 KDM6AO15550 1401 aaPredicted RBP19.8■□□□□ 0.76
SCN4A-203ENST00000584310 GNAT3A8MTJ3 354 aa19.8■□□□□ 0.76
SCN4A-203ENST00000584310 GNPATO15228 680 aa19.8■□□□□ 0.76
SCN4A-203ENST00000584310 RNMTO43148 476 aaKnown RBP19.8■□□□□ 0.76
SCN4A-203ENST00000584310 FCHSD2O94868 740 aa19.8■□□□□ 0.76
SCN4A-203ENST00000584310 PHF14O94880 888 aa19.8■□□□□ 0.76
SCN4A-203ENST00000584310 PRKAR2BP31323 418 aa19.8■□□□□ 0.76
SCN4A-203ENST00000584310 DDX10Q13206 875 aaKnown RBP19.8■□□□□ 0.76
SCN4A-203ENST00000584310 TTC5Q8N0Z6 440 aa19.8■□□□□ 0.76
SCN4A-203ENST00000584310 RTF1Q92541 710 aaKnown RBP19.8■□□□□ 0.76
SCN4A-203ENST00000584310 ITGB4P16144 1822 aa19.79■□□□□ 0.76
SCN4A-203ENST00000584310 PTCD1O75127 700 aaKnown RBP19.79■□□□□ 0.76
SCN4A-203ENST00000584310 PTGER2P43116 358 aa19.79■□□□□ 0.76
SCN4A-203ENST00000584310 KLHL34Q8N239 644 aa19.79■□□□□ 0.76
SCN4A-203ENST00000584310 RTCBQ9Y3I0 505 aaKnown RBP19.79■□□□□ 0.76
SCN4A-203ENST00000584310 COL23A1Q86Y22 540 aaPredicted RBP19.78■□□□□ 0.76
SCN4A-203ENST00000584310 MAP3K5Q99683 1374 aa19.78■□□□□ 0.76
SCN4A-203ENST00000584310 COL3A1P02461 1466 aaPredicted RBP19.78■□□□□ 0.76
SCN4A-203ENST00000584310 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.77■□□□□ 0.76
SCN4A-203ENST00000584310 C5P01031 1676 aa19.77■□□□□ 0.76
SCN4A-203ENST00000584310 ADRA2BP18089 450 aa19.76■□□□□ 0.75
SCN4A-203ENST00000584310 TRAPPC3LQ5T215 181 aa19.76■□□□□ 0.75
SCN4A-203ENST00000584310 LINC00116Q8NCU8 138 aa19.76■□□□□ 0.75
SCN4A-203ENST00000584310 FHDC1Q9C0D6 1143 aaPredicted RBP19.76■□□□□ 0.75
SCN4A-203ENST00000584310 RC3H1Q5TC82 1133 aaKnown RBP19.75■□□□□ 0.75
SCN4A-203ENST00000584310 LGR6Q9HBX8 967 aa19.75■□□□□ 0.75
SCN4A-203ENST00000584310 QSER1Q2KHR3 1735 aa19.74■□□□□ 0.75
SCN4A-203ENST00000584310 ITPK1Q13572 414 aa19.74■□□□□ 0.75
SCN4A-203ENST00000584310 RSPH6AQ9H0K4 717 aa19.74■□□□□ 0.75
SCN4A-203ENST00000584310 MAPK8IP3Q9UPT6 1336 aa19.74■□□□□ 0.75
SCN4A-203ENST00000584310 C4BP0C0L5 1744 aa19.73■□□□□ 0.75
SCN4A-203ENST00000584310 RFC4P35249 363 aa19.73■□□□□ 0.75
SCN4A-203ENST00000584310 NPM2Q86SE8 214 aaKnown RBP19.73■□□□□ 0.75
SCN4A-203ENST00000584310 SGIP1Q9BQI5 828 aa19.73■□□□□ 0.75
SCN4A-203ENST00000584310 SYT17Q9BSW7 474 aa19.73■□□□□ 0.75
SCN4A-203ENST00000584310 CNTNAP4Q9C0A0 1308 aa19.73■□□□□ 0.75
SCN4A-203ENST00000584310 MSL1Q68DK7 614 aa19.72■□□□□ 0.75
SCN4A-203ENST00000584310 TEX13AQ9BXU3 409 aaPredicted RBP19.7■□□□□ 0.74
SCN4A-203ENST00000584310 MYBBP1AQ9BQG0 1328 aaKnown RBP19.7■□□□□ 0.74
SCN4A-203ENST00000584310 HTATSF1O43719 755 aaKnown RBP19.69■□□□□ 0.74
SCN4A-203ENST00000584310 RPS6KA4O75676 772 aa19.69■□□□□ 0.74
SCN4A-203ENST00000584310 STARD3NLO95772 234 aa19.69■□□□□ 0.74
SCN4A-203ENST00000584310 VSIG10Q8N0Z9 540 aa19.69■□□□□ 0.74
SCN4A-203ENST00000584310 NLGN1Q8N2Q7 840 aa19.69■□□□□ 0.74
SCN4A-203ENST00000584310 CRKLP46109 303 aaKnown RBP19.68■□□□□ 0.74
SCN4A-203ENST00000584310 SLC39A6Q13433 755 aa19.68■□□□□ 0.74
SCN4A-203ENST00000584310 PHACTR3Q96KR7 559 aa19.68■□□□□ 0.74
SCN4A-203ENST00000584310 MRC1P22897 1456 aa19.67■□□□□ 0.74
SCN4A-203ENST00000584310 BTBD11A6QL63 1104 aa19.67■□□□□ 0.74
SCN4A-203ENST00000584310 WDR43Q15061 677 aaKnown RBP eCLIP19.67■□□□□ 0.74
SCN4A-203ENST00000584310 GPR162Q16538 588 aa19.67■□□□□ 0.74
SCN4A-203ENST00000584310 SCN11AQ9UI33 1791 aa19.67■□□□□ 0.74
SCN4A-203ENST00000584310 TAF1LQ8IZX4 1826 aa19.67■□□□□ 0.74
SCN4A-203ENST00000584310 ZNF790Q6PG37 636 aa19.66■□□□□ 0.74
SCN4A-203ENST00000584310 FMNL2Q96PY5 1086 aa19.66■□□□□ 0.74
SCN4A-203ENST00000584310 CCDC87Q9NVE4 849 aa19.66■□□□□ 0.74
SCN4A-203ENST00000584310 ZNF831Q5JPB2 1677 aa19.65■□□□□ 0.74
SCN4A-203ENST00000584310 ZPR1O75312 459 aa19.65■□□□□ 0.74
SCN4A-203ENST00000584310 PELP1Q8IZL8 1130 aaKnown RBP19.65■□□□□ 0.74
SCN4A-203ENST00000584310 IL17REQ8NFR9 667 aa19.65■□□□□ 0.74
SCN4A-203ENST00000584310 SLC4A9Q96Q91 983 aa19.65■□□□□ 0.74
SCN4A-203ENST00000584310 CD2APQ9Y5K6 639 aa19.65■□□□□ 0.74
SCN4A-203ENST00000584310 DNAJC10Q8IXB1 793 aa19.64■□□□□ 0.73
SCN4A-203ENST00000584310 ARHGEF1Q92888 912 aaKnown RBP19.64■□□□□ 0.73
SCN4A-203ENST00000584310 PNISRQ8TF01 805 aaKnown RBP19.63■□□□□ 0.73
SCN4A-203ENST00000584310 LMOD3Q0VAK6 560 aa19.62■□□□□ 0.73
SCN4A-203ENST00000584310 PARP3Q9Y6F1 533 aa19.62■□□□□ 0.73
SCN4A-203ENST00000584310 TUBGCP6Q96RT7 1819 aa19.62■□□□□ 0.73
SCN4A-203ENST00000584310 CEMIPQ8WUJ3 1361 aa19.61■□□□□ 0.73
SCN4A-203ENST00000584310 A0A087WZG4 1122 aa19.61■□□□□ 0.73
SCN4A-203ENST00000584310 MCM10Q7L590 875 aa19.61■□□□□ 0.73
SCN4A-203ENST00000584310 MMP10P09238 476 aa19.6■□□□□ 0.73
SCN4A-203ENST00000584310 CYP19A1P11511 503 aaPredicted RBP19.6■□□□□ 0.73
SCN4A-203ENST00000584310 YY1P25490 414 aa19.6■□□□□ 0.73
SCN4A-203ENST00000584310 NFE2L2Q16236 605 aa19.6■□□□□ 0.73
SCN4A-203ENST00000584310 UBR3Q6ZT12 1888 aa19.59■□□□□ 0.73
SCN4A-203ENST00000584310 GRIN3BO60391 1043 aa19.59■□□□□ 0.73
SCN4A-203ENST00000584310 TAF7Q15545 349 aaPredicted RBP19.59■□□□□ 0.73
SCN4A-203ENST00000584310 SMIM5Q71RC9 77 aa19.59■□□□□ 0.73
SCN4A-203ENST00000584310 AMIGO3Q86WK7 504 aa19.59■□□□□ 0.73
SCN4A-203ENST00000584310 ZNF496Q96IT1 587 aaPredicted RBP19.59■□□□□ 0.73
SCN4A-203ENST00000584310 HEG1Q9ULI3 1381 aa19.58■□□□□ 0.73
SCN4A-203ENST00000584310 ADAMTS7Q9UKP4 1686 aa19.57■□□□□ 0.72
SCN4A-203ENST00000584310 ZNF316A6NFI3 1004 aaPredicted RBP19.57■□□□□ 0.72
SCN4A-203ENST00000584310 CANXP27824 592 aaKnown RBP19.57■□□□□ 0.72
SCN4A-203ENST00000584310 INTS5Q6P9B9 1019 aaKnown RBP19.57■□□□□ 0.72
SCN4A-203ENST00000584310 PRKRIP1Q9H875 184 aaPredicted RBP19.57■□□□□ 0.72
SCN4A-203ENST00000584310 ZNF330Q9Y3S2 320 aaPredicted RBP19.57■□□□□ 0.72
SCN4A-203ENST00000584310 USP42Q9H9J4 1324 aaKnown RBP19.56■□□□□ 0.72
SCN4A-203ENST00000584310 SNRPA1P09661 255 aaKnown RBP19.56■□□□□ 0.72
SCN4A-203ENST00000584310 GYS1P13807 737 aa19.56■□□□□ 0.72
SCN4A-203ENST00000584310 SOS1Q07889 1333 aaPredicted RBP19.55■□□□□ 0.72
SCN4A-203ENST00000584310 DCTN1Q14203 1278 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms