RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 KNSTRNQ9Y448 316 aa11.89□□□□□ -0.51
CDK5RAP3-229ENST00000583697 SCN11AQ9UI33 1791 aa11.89□□□□□ -0.51
CDK5RAP3-229ENST00000583697 CICQ96RK0 1608 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-229ENST00000583697 VIRMAQ69YN4 1812 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-229ENST00000583697 GRIN3BO60391 1043 aa11.88□□□□□ -0.51
CDK5RAP3-229ENST00000583697 AMOTQ4VCS5 1084 aa11.88□□□□□ -0.51
CDK5RAP3-229ENST00000583697 PLEKHO1Q53GL0 409 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-229ENST00000583697 C1orf141Q5JVX7 400 aa11.88□□□□□ -0.51
CDK5RAP3-229ENST00000583697 ZNF530Q6P9A1 599 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-229ENST00000583697 DCAF5Q96JK2 942 aa11.88□□□□□ -0.51
CDK5RAP3-229ENST00000583697 ASAP1Q9ULH1 1129 aa11.88□□□□□ -0.51
CDK5RAP3-229ENST00000583697 TJP1Q07157 1748 aa11.87□□□□□ -0.51
CDK5RAP3-229ENST00000583697 ATG3Q9NT62 314 aa11.87□□□□□ -0.51
CDK5RAP3-229ENST00000583697 CD2APQ9Y5K6 639 aa11.87□□□□□ -0.51
CDK5RAP3-229ENST00000583697 KIF13BQ9NQT8 1826 aa11.86□□□□□ -0.51
CDK5RAP3-229ENST00000583697 ERVV-2B6SEH9 535 aa11.86□□□□□ -0.51
CDK5RAP3-229ENST00000583697 ITPK1Q13572 414 aa11.86□□□□□ -0.51
CDK5RAP3-229ENST00000583697 AMIGO3Q86WK7 504 aa11.86□□□□□ -0.51
CDK5RAP3-229ENST00000583697 RBM42Q9BTD8 480 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-229ENST00000583697 KIF7Q2M1P5 1343 aa11.86□□□□□ -0.51
CDK5RAP3-229ENST00000583697 GIGYF1O75420 1035 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-229ENST00000583697 YBX3P16989 372 aaKnown RBP eCLIP11.85□□□□□ -0.51
CDK5RAP3-229ENST00000583697 CABP4P57796 275 aa11.85□□□□□ -0.51
CDK5RAP3-229ENST00000583697 SULT6B1Q6IMI4 303 aa11.85□□□□□ -0.51
CDK5RAP3-229ENST00000583697 AEBP1Q8IUX7 1158 aa11.85□□□□□ -0.51
CDK5RAP3-229ENST00000583697 RTCBQ9Y3I0 505 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-229ENST00000583697 KIAA1551Q9HCM1 1747 aa11.84□□□□□ -0.51
CDK5RAP3-229ENST00000583697 MTHFSP49914 203 aa11.84□□□□□ -0.51
CDK5RAP3-229ENST00000583697 SMIM5Q71RC9 77 aa11.84□□□□□ -0.51
CDK5RAP3-229ENST00000583697 CNTNAP4Q9C0A0 1308 aa11.84□□□□□ -0.51
CDK5RAP3-229ENST00000583697 MRC1P22897 1456 aa11.83□□□□□ -0.52
CDK5RAP3-229ENST00000583697 N4BP2Q86UW6 1770 aaPredicted RBP11.82□□□□□ -0.52
CDK5RAP3-229ENST00000583697 SENP3-EIF4A1A0A087X0R7 540 aa11.82□□□□□ -0.52
CDK5RAP3-229ENST00000583697 AMER1Q5JTC6 1135 aaPredicted RBP11.82□□□□□ -0.52
CDK5RAP3-229ENST00000583697 ATP10DQ9P241 1426 aa11.82□□□□□ -0.52
CDK5RAP3-229ENST00000583697 ADAMTS7Q9UKP4 1686 aa11.81□□□□□ -0.52
CDK5RAP3-229ENST00000583697 C10orf71Q711Q0 1435 aa11.81□□□□□ -0.52
CDK5RAP3-229ENST00000583697 MMP10P09238 476 aa11.81□□□□□ -0.52
CDK5RAP3-229ENST00000583697 ADRA2BP18089 450 aa11.81□□□□□ -0.52
CDK5RAP3-229ENST00000583697 IL13P35225 146 aa11.81□□□□□ -0.52
CDK5RAP3-229ENST00000583697 C1QTNF8P60827 252 aa11.81□□□□□ -0.52
CDK5RAP3-229ENST00000583697 TRAPPC3LQ5T215 181 aa11.81□□□□□ -0.52
CDK5RAP3-229ENST00000583697 WWC3Q9ULE0 1092 aa11.81□□□□□ -0.52
CDK5RAP3-229ENST00000583697 PXDNLA1KZ92 1463 aa11.81□□□□□ -0.52
CDK5RAP3-229ENST00000583697 PTCD1O75127 700 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-229ENST00000583697 RFC4P35249 363 aa11.8□□□□□ -0.52
CDK5RAP3-229ENST00000583697 AKAP4Q5JQC9 854 aa11.8□□□□□ -0.52
CDK5RAP3-229ENST00000583697 BRCA1P38398 1863 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-229ENST00000583697 UBR2Q8IWV8 1755 aa11.79□□□□□ -0.52
CDK5RAP3-229ENST00000583697 MYH14Q7Z406 1995 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-229ENST00000583697 CC2D1BQ5T0F9 858 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-229ENST00000583697 RC3H1Q5TC82 1133 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-229ENST00000583697 NLGN1Q8N2Q7 840 aa11.79□□□□□ -0.52
CDK5RAP3-229ENST00000583697 SLC4A9Q96Q91 983 aa11.79□□□□□ -0.52
CDK5RAP3-229ENST00000583697 ADCY9O60503 1353 aa11.79□□□□□ -0.52
CDK5RAP3-229ENST00000583697 RPS6KA4O75676 772 aa11.78□□□□□ -0.52
CDK5RAP3-229ENST00000583697 HMOX1P09601 288 aa11.78□□□□□ -0.52
CDK5RAP3-229ENST00000583697 NFATC2IPQ8NCF5 419 aa11.78□□□□□ -0.52
CDK5RAP3-229ENST00000583697 CCDC87Q9NVE4 849 aa11.78□□□□□ -0.52
CDK5RAP3-229ENST00000583697 COL3A1P02461 1466 aaPredicted RBP11.77□□□□□ -0.52
CDK5RAP3-229ENST00000583697 KCPQ6ZWJ8 1503 aa11.77□□□□□ -0.52
CDK5RAP3-229ENST00000583697 DIAPH1O60610 1272 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-229ENST00000583697 CRKLP46109 303 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-229ENST00000583697 ARHGEF1Q92888 912 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-229ENST00000583697 GPBP1L1Q9HC44 474 aaPredicted RBP11.77□□□□□ -0.53
CDK5RAP3-229ENST00000583697 PARP3Q9Y6F1 533 aa11.77□□□□□ -0.53
CDK5RAP3-229ENST00000583697 ARFGEF1Q9Y6D6 1849 aa11.76□□□□□ -0.53
CDK5RAP3-229ENST00000583697 GYS1P13807 737 aa11.76□□□□□ -0.53
CDK5RAP3-229ENST00000583697 TGFB2P61812 414 aa11.76□□□□□ -0.53
CDK5RAP3-229ENST00000583697 CNGB1Q14028 1251 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-229ENST00000583697 ZNF526Q8TF50 670 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-229ENST00000583697 SLC52A2Q9HAB3 445 aa11.76□□□□□ -0.53
CDK5RAP3-229ENST00000583697 USP42Q9H9J4 1324 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-229ENST00000583697 NPC1L1Q9UHC9 1359 aa11.76□□□□□ -0.53
CDK5RAP3-229ENST00000583697 SCN7AQ01118 1682 aa11.75□□□□□ -0.53
CDK5RAP3-229ENST00000583697 SIPA1L3O60292 1781 aaPredicted RBP11.75□□□□□ -0.53
CDK5RAP3-229ENST00000583697 BCS1LQ9Y276 419 aa11.75□□□□□ -0.53
CDK5RAP3-229ENST00000583697 U2SURPO15042 1029 aaKnown RBP11.74□□□□□ -0.53
CDK5RAP3-229ENST00000583697 COL15A1P39059 1388 aa11.74□□□□□ -0.53
CDK5RAP3-229ENST00000583697 DLEC1Q9Y238 1755 aa11.74□□□□□ -0.53
CDK5RAP3-229ENST00000583697 PER1O15534 1290 aaPredicted RBP11.73□□□□□ -0.53
CDK5RAP3-229ENST00000583697 RNMTO43148 476 aaKnown RBP11.73□□□□□ -0.53
CDK5RAP3-229ENST00000583697 MTHFSDQ2M296 383 aaKnown RBP11.73□□□□□ -0.53
CDK5RAP3-229ENST00000583697 DNAJC10Q8IXB1 793 aa11.73□□□□□ -0.53
CDK5RAP3-229ENST00000583697 TTC5Q8N0Z6 440 aa11.73□□□□□ -0.53
CDK5RAP3-229ENST00000583697 AFDNP55196 1824 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP3-229ENST00000583697 NRXN2Q9P2S2 1712 aa11.72□□□□□ -0.53
CDK5RAP3-229ENST00000583697 A0A0G2JLW4 131 aa11.72□□□□□ -0.53
CDK5RAP3-229ENST00000583697 ZPR1O75312 459 aa11.72□□□□□ -0.53
CDK5RAP3-229ENST00000583697 FCHSD2O94868 740 aa11.72□□□□□ -0.53
CDK5RAP3-229ENST00000583697 ZEB1P37275 1124 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-229ENST00000583697 GAS2L2Q8NHY3 880 aa11.72□□□□□ -0.53
CDK5RAP3-229ENST00000583697 LGR6Q9HBX8 967 aa11.72□□□□□ -0.53
CDK5RAP3-229ENST00000583697 SRP68Q9UHB9 627 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP3-229ENST00000583697 SOS1Q07889 1333 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP3-229ENST00000583697 TEFQ10587 303 aa11.71□□□□□ -0.53
CDK5RAP3-229ENST00000583697 SLC39A6Q13433 755 aa11.71□□□□□ -0.53
CDK5RAP3-229ENST00000583697 CFAP53Q96M91 514 aa11.71□□□□□ -0.53
CDK5RAP3-229ENST00000583697 DPEP1P16444 411 aa11.7□□□□□ -0.54
CDK5RAP3-229ENST00000583697 FKBP8Q14318 412 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms