RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 ZNF316A6NFI3 1004 aaPredicted RBP33.53■■■□□ 2.96
TSEN54-209ENST00000583454 GPR162Q16538 588 aa33.53■■■□□ 2.96
TSEN54-209ENST00000583454 SMIM5Q71RC9 77 aa33.53■■■□□ 2.96
TSEN54-209ENST00000583454 KDRP35968 1356 aa33.52■■■□□ 2.96
TSEN54-209ENST00000583454 ITPK1Q13572 414 aa33.52■■■□□ 2.96
TSEN54-209ENST00000583454 AK7Q96M32 723 aa33.52■■■□□ 2.96
TSEN54-209ENST00000583454 ATG3Q9NT62 314 aa33.52■■■□□ 2.96
TSEN54-209ENST00000583454 KDM6AO15550 1401 aaPredicted RBP33.52■■■□□ 2.96
TSEN54-209ENST00000583454 PPP2R1AP30153 589 aa33.51■■■□□ 2.95
TSEN54-209ENST00000583454 COL5A3P25940 1745 aaPredicted RBP33.5■■■□□ 2.95
TSEN54-209ENST00000583454 AEBP1Q8IUX7 1158 aa33.49■■■□□ 2.95
TSEN54-209ENST00000583454 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.48■■■□□ 2.95
TSEN54-209ENST00000583454 COL3A1P02461 1466 aaPredicted RBP33.46■■■□□ 2.95
TSEN54-209ENST00000583454 SSFA2P28290 1259 aa33.46■■■□□ 2.95
TSEN54-209ENST00000583454 ERVV-2B6SEH9 535 aa33.45■■■□□ 2.95
TSEN54-209ENST00000583454 DIAPH1O60610 1272 aaKnown RBP33.45■■■□□ 2.95
TSEN54-209ENST00000583454 PHF14O94880 888 aa33.45■■■□□ 2.95
TSEN54-209ENST00000583454 YBX3P16989 372 aaKnown RBP eCLIP33.45■■■□□ 2.95
TSEN54-209ENST00000583454 SLC4A9Q96Q91 983 aa33.45■■■□□ 2.95
TSEN54-209ENST00000583454 PLEKHO1Q53GL0 409 aaPredicted RBP33.44■■■□□ 2.94
TSEN54-209ENST00000583454 DCAF5Q96JK2 942 aa33.44■■■□□ 2.94
TSEN54-209ENST00000583454 SCN11AQ9UI33 1791 aa33.44■■■□□ 2.94
TSEN54-209ENST00000583454 ATP6V1AP38606 617 aa33.43■■■□□ 2.94
TSEN54-209ENST00000583454 PELP1Q8IZL8 1130 aaKnown RBP33.43■■■□□ 2.94
TSEN54-209ENST00000583454 ZNF530Q6P9A1 599 aaPredicted RBP33.42■■■□□ 2.94
TSEN54-209ENST00000583454 CD2APQ9Y5K6 639 aa33.42■■■□□ 2.94
TSEN54-209ENST00000583454 MYH14Q7Z406 1995 aaKnown RBP33.41■■■□□ 2.94
TSEN54-209ENST00000583454 HSP90AB1P08238 724 aaKnown RBP33.41■■■□□ 2.94
TSEN54-209ENST00000583454 RALBP1Q15311 655 aa33.41■■■□□ 2.94
TSEN54-209ENST00000583454 AMOTQ4VCS5 1084 aa33.41■■■□□ 2.94
TSEN54-209ENST00000583454 VIRMAQ69YN4 1812 aaKnown RBP33.39■■■□□ 2.94
TSEN54-209ENST00000583454 GNPATO15228 680 aa33.39■■■□□ 2.94
TSEN54-209ENST00000583454 SULT6B1Q6IMI4 303 aa33.39■■■□□ 2.94
TSEN54-209ENST00000583454 CFAP53Q96M91 514 aa33.39■■■□□ 2.94
TSEN54-209ENST00000583454 CICQ96RK0 1608 aaPredicted RBP33.38■■■□□ 2.93
TSEN54-209ENST00000583454 C4AP0C0L4 1744 aa33.36■■■□□ 2.93
TSEN54-209ENST00000583454 KIF13BQ9NQT8 1826 aa33.35■■■□□ 2.93
TSEN54-209ENST00000583454 TJP1Q07157 1748 aa33.35■■■□□ 2.93
TSEN54-209ENST00000583454 KIAA1551Q9HCM1 1747 aa33.34■■■□□ 2.93
TSEN54-209ENST00000583454 GRIN3BO60391 1043 aa33.32■■■□□ 2.92
TSEN54-209ENST00000583454 CABP4P57796 275 aa33.31■■■□□ 2.92
TSEN54-209ENST00000583454 RBM42Q9BTD8 480 aaKnown RBP33.31■■■□□ 2.92
TSEN54-209ENST00000583454 CNTNAP4Q9C0A0 1308 aa33.29■■■□□ 2.92
TSEN54-209ENST00000583454 HMOX1P09601 288 aa33.29■■■□□ 2.92
TSEN54-209ENST00000583454 C1orf141Q5JVX7 400 aa33.29■■■□□ 2.92
TSEN54-209ENST00000583454 RC3H1Q5TC82 1133 aaKnown RBP33.29■■■□□ 2.92
TSEN54-209ENST00000583454 ADAMTS7Q9UKP4 1686 aa33.29■■■□□ 2.92
TSEN54-209ENST00000583454 U2SURPO15042 1029 aaKnown RBP33.28■■■□□ 2.92
TSEN54-209ENST00000583454 NFATC2IPQ8NCF5 419 aa33.27■■■□□ 2.92
TSEN54-209ENST00000583454 NUDCQ9Y266 331 aa33.27■■■□□ 2.92
TSEN54-209ENST00000583454 RTCBQ9Y3I0 505 aaKnown RBP33.27■■■□□ 2.92
TSEN54-209ENST00000583454 MRC1P22897 1456 aa33.26■■■□□ 2.92
TSEN54-209ENST00000583454 PRKRIP1Q9H875 184 aaPredicted RBP33.26■■■□□ 2.91
TSEN54-209ENST00000583454 MYBBP1AQ9BQG0 1328 aaKnown RBP33.25■■■□□ 2.91
TSEN54-209ENST00000583454 MMP10P09238 476 aa33.24■■■□□ 2.91
TSEN54-209ENST00000583454 TRAPPC3LQ5T215 181 aa33.23■■■□□ 2.91
TSEN54-209ENST00000583454 ARHGEF1Q92888 912 aaKnown RBP33.23■■■□□ 2.91
TSEN54-209ENST00000583454 N4BP2Q86UW6 1770 aaPredicted RBP33.23■■■□□ 2.91
TSEN54-209ENST00000583454 PTCD1O75127 700 aaKnown RBP33.22■■■□□ 2.91
TSEN54-209ENST00000583454 RPS6KA4O75676 772 aa33.22■■■□□ 2.91
TSEN54-209ENST00000583454 ADRA2BP18089 450 aa33.22■■■□□ 2.91
TSEN54-209ENST00000583454 AKAP4Q5JQC9 854 aa33.21■■■□□ 2.91
TSEN54-209ENST00000583454 PXDNLA1KZ92 1463 aa33.19■■■□□ 2.9
TSEN54-209ENST00000583454 BRCA1P38398 1863 aaKnown RBP33.19■■■□□ 2.9
TSEN54-209ENST00000583454 C10orf71Q711Q0 1435 aa33.19■■■□□ 2.9
TSEN54-209ENST00000583454 GYS1P13807 737 aa33.18■■■□□ 2.9
TSEN54-209ENST00000583454 C1QTNF8P60827 252 aa33.18■■■□□ 2.9
TSEN54-209ENST00000583454 LGR6Q9HBX8 967 aa33.18■■■□□ 2.9
TSEN54-209ENST00000583454 ADCY9O60503 1353 aa33.18■■■□□ 2.9
TSEN54-209ENST00000583454 U2AF1L5P0DN76 240 aaPredicted RBP33.17■■■□□ 2.9
TSEN54-209ENST00000583454 U2AF1Q01081 240 aaKnown RBP eCLIP33.17■■■□□ 2.9
TSEN54-209ENST00000583454 NLGN1Q8N2Q7 840 aa33.17■■■□□ 2.9
TSEN54-209ENST00000583454 CRKLP46109 303 aaKnown RBP33.16■■■□□ 2.9
TSEN54-209ENST00000583454 RSPH6AQ9H0K4 717 aa33.16■■■□□ 2.9
TSEN54-209ENST00000583454 SLC52A2Q9HAB3 445 aa33.16■■■□□ 2.9
TSEN54-209ENST00000583454 WWC3Q9ULE0 1092 aa33.16■■■□□ 2.9
TSEN54-209ENST00000583454 KCPQ6ZWJ8 1503 aa33.16■■■□□ 2.9
TSEN54-209ENST00000583454 UBR2Q8IWV8 1755 aa33.16■■■□□ 2.9
TSEN54-209ENST00000583454 ATP10DQ9P241 1426 aa33.15■■■□□ 2.9
TSEN54-209ENST00000583454 FCHSD2O94868 740 aa33.14■■■□□ 2.9
TSEN54-209ENST00000583454 RNMTO43148 476 aaKnown RBP33.13■■■□□ 2.89
TSEN54-209ENST00000583454 MTHFSDQ2M296 383 aaKnown RBP33.13■■■□□ 2.89
TSEN54-209ENST00000583454 RFC4P35249 363 aa33.12■■■□□ 2.89
TSEN54-209ENST00000583454 CEP350Q5VT06 3117 aa33.11■■■□□ 2.89
TSEN54-209ENST00000583454 PRKAR2BP31323 418 aa33.11■■■□□ 2.89
TSEN54-209ENST00000583454 INTS5Q6P9B9 1019 aaKnown RBP33.11■■■□□ 2.89
TSEN54-209ENST00000583454 GIGYF1O75420 1035 aaPredicted RBP33.1■■■□□ 2.89
TSEN54-209ENST00000583454 SIPA1L3O60292 1781 aaPredicted RBP33.09■■■□□ 2.89
TSEN54-209ENST00000583454 USP42Q9H9J4 1324 aaKnown RBP33.08■■■□□ 2.89
TSEN54-209ENST00000583454 DNAJC10Q8IXB1 793 aa33.08■■■□□ 2.89
TSEN54-209ENST00000583454 PHACTR3Q96KR7 559 aa33.08■■■□□ 2.89
TSEN54-209ENST00000583454 SRP68Q9UHB9 627 aaKnown RBP33.08■■■□□ 2.89
TSEN54-209ENST00000583454 TGFB2P61812 414 aa33.06■■■□□ 2.88
TSEN54-209ENST00000583454 SLC39A6Q13433 755 aa33.06■■■□□ 2.88
TSEN54-209ENST00000583454 GAS2L2Q8NHY3 880 aa33.05■■■□□ 2.88
TSEN54-209ENST00000583454 FKBP8Q14318 412 aa33.04■■■□□ 2.88
TSEN54-209ENST00000583454 ARFGEF1Q9Y6D6 1849 aa33.04■■■□□ 2.88
TSEN54-209ENST00000583454 A0A0G2JLW4 131 aa33.03■■■□□ 2.88
TSEN54-209ENST00000583454 CCDC87Q9NVE4 849 aa33.03■■■□□ 2.88
TSEN54-209ENST00000583454 CYP19A1P11511 503 aaPredicted RBP33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms