RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 DIEXFQ68CQ4 756 aaKnown RBP13.3□□□□□ -0.28
CDK5RAP3-227ENST00000583352 IGSF1Q8N6C5 1336 aa13.3□□□□□ -0.28
CDK5RAP3-227ENST00000583352 ATG3Q9NT62 314 aa13.29□□□□□ -0.28
CDK5RAP3-227ENST00000583352 HSP90AB1P08238 724 aaKnown RBP13.28□□□□□ -0.28
CDK5RAP3-227ENST00000583352 EIF4G2P78344 907 aaKnown RBP eCLIP13.28□□□□□ -0.28
CDK5RAP3-227ENST00000583352 ERVV-2B6SEH9 535 aa13.27□□□□□ -0.29
CDK5RAP3-227ENST00000583352 PLEKHO1Q53GL0 409 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP3-227ENST00000583352 DCAF5Q96JK2 942 aa13.27□□□□□ -0.29
CDK5RAP3-227ENST00000583352 GPBP1L1Q9HC44 474 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP3-227ENST00000583352 WWC3Q9ULE0 1092 aa13.27□□□□□ -0.29
CDK5RAP3-227ENST00000583352 KDRP35968 1356 aa13.27□□□□□ -0.29
CDK5RAP3-227ENST00000583352 ADCY9O60503 1353 aa13.26□□□□□ -0.29
CDK5RAP3-227ENST00000583352 TRAPPC3LQ5T215 181 aa13.26□□□□□ -0.29
CDK5RAP3-227ENST00000583352 RBM42Q9BTD8 480 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-227ENST00000583352 PANK3Q9H999 370 aa13.26□□□□□ -0.29
CDK5RAP3-227ENST00000583352 RTCBQ9Y3I0 505 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-227ENST00000583352 MMP10P09238 476 aa13.25□□□□□ -0.29
CDK5RAP3-227ENST00000583352 HSPA5P11021 654 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-227ENST00000583352 AMOTQ4VCS5 1084 aa13.25□□□□□ -0.29
CDK5RAP3-227ENST00000583352 ZNF530Q6P9A1 599 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-227ENST00000583352 ZNF831Q5JPB2 1677 aa13.24□□□□□ -0.29
CDK5RAP3-227ENST00000583352 ADRA2BP18089 450 aa13.24□□□□□ -0.29
CDK5RAP3-227ENST00000583352 CABP4P57796 275 aa13.24□□□□□ -0.29
CDK5RAP3-227ENST00000583352 RC3H1Q5TC82 1133 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP3-227ENST00000583352 MORC1Q86VD1 984 aa13.24□□□□□ -0.29
CDK5RAP3-227ENST00000583352 NLGN1Q8N2Q7 840 aa13.24□□□□□ -0.29
CDK5RAP3-227ENST00000583352 ZNF526Q8TF50 670 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP3-227ENST00000583352 CNTNAP4Q9C0A0 1308 aa13.23□□□□□ -0.29
CDK5RAP3-227ENST00000583352 C1orf141Q5JVX7 400 aa13.23□□□□□ -0.29
CDK5RAP3-227ENST00000583352 SLC4A9Q96Q91 983 aa13.23□□□□□ -0.29
CDK5RAP3-227ENST00000583352 KDM6AO15550 1401 aaPredicted RBP13.22□□□□□ -0.29
CDK5RAP3-227ENST00000583352 CICQ96RK0 1608 aaPredicted RBP13.22□□□□□ -0.29
CDK5RAP3-227ENST00000583352 RPS6KA4O75676 772 aa13.22□□□□□ -0.29
CDK5RAP3-227ENST00000583352 MTHFSP49914 203 aa13.22□□□□□ -0.29
CDK5RAP3-227ENST00000583352 TGFB2P61812 414 aa13.22□□□□□ -0.29
CDK5RAP3-227ENST00000583352 ARHGEF1Q92888 912 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP3-227ENST00000583352 PXDNLA1KZ92 1463 aa13.22□□□□□ -0.29
CDK5RAP3-227ENST00000583352 COL5A3P25940 1745 aaPredicted RBP13.22□□□□□ -0.29
CDK5RAP3-227ENST00000583352 KIF13BQ9NQT8 1826 aa13.21□□□□□ -0.29
CDK5RAP3-227ENST00000583352 RFC4P35249 363 aa13.21□□□□□ -0.29
CDK5RAP3-227ENST00000583352 AEBP1Q8IUX7 1158 aa13.21□□□□□ -0.29
CDK5RAP3-227ENST00000583352 CCDC87Q9NVE4 849 aa13.21□□□□□ -0.29
CDK5RAP3-227ENST00000583352 GYS1P13807 737 aa13.2□□□□□ -0.3
CDK5RAP3-227ENST00000583352 SULT6B1Q6IMI4 303 aa13.2□□□□□ -0.3
CDK5RAP3-227ENST00000583352 BCS1LQ9Y276 419 aa13.2□□□□□ -0.3
CDK5RAP3-227ENST00000583352 KNSTRNQ9Y448 316 aa13.2□□□□□ -0.3
CDK5RAP3-227ENST00000583352 PARP3Q9Y6F1 533 aa13.2□□□□□ -0.3
CDK5RAP3-227ENST00000583352 C10orf71Q711Q0 1435 aa13.2□□□□□ -0.3
CDK5RAP3-227ENST00000583352 C4AP0C0L4 1744 aa13.19□□□□□ -0.3
CDK5RAP3-227ENST00000583352 A0A0G2JLW4 131 aa13.19□□□□□ -0.3
CDK5RAP3-227ENST00000583352 PTCD1O75127 700 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-227ENST00000583352 N4BP2Q86UW6 1770 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-227ENST00000583352 KIAA1551Q9HCM1 1747 aa13.19□□□□□ -0.3
CDK5RAP3-227ENST00000583352 HSPA6P17066 643 aa13.18□□□□□ -0.3
CDK5RAP3-227ENST00000583352 NFATC2IPQ8NCF5 419 aa13.18□□□□□ -0.3
CDK5RAP3-227ENST00000583352 DPEP1P16444 411 aa13.17□□□□□ -0.3
CDK5RAP3-227ENST00000583352 IL13P35225 146 aa13.17□□□□□ -0.3
CDK5RAP3-227ENST00000583352 CRKLP46109 303 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP3-227ENST00000583352 MYH14Q7Z406 1995 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP3-227ENST00000583352 KIF3CO14782 793 aa13.16□□□□□ -0.3
CDK5RAP3-227ENST00000583352 FCHSD2O94868 740 aa13.16□□□□□ -0.3
CDK5RAP3-227ENST00000583352 ARHGAP27Q6ZUM4 889 aa13.16□□□□□ -0.3
CDK5RAP3-227ENST00000583352 UTRNP46939 3433 aa13.16□□□□□ -0.3
CDK5RAP3-227ENST00000583352 SCN11AQ9UI33 1791 aa13.15□□□□□ -0.3
CDK5RAP3-227ENST00000583352 AKAP4Q5JQC9 854 aa13.15□□□□□ -0.3
CDK5RAP3-227ENST00000583352 SRP68Q9UHB9 627 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-227ENST00000583352 TJP1Q07157 1748 aa13.15□□□□□ -0.3
CDK5RAP3-227ENST00000583352 USP42Q9H9J4 1324 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-227ENST00000583352 BRCA1P38398 1863 aaKnown RBP13.13□□□□□ -0.31
CDK5RAP3-227ENST00000583352 FKBP8Q14318 412 aa13.13□□□□□ -0.31
CDK5RAP3-227ENST00000583352 AMER1Q5JTC6 1135 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-227ENST00000583352 SLC52A2Q9HAB3 445 aa13.13□□□□□ -0.31
CDK5RAP3-227ENST00000583352 PIM2Q9P1W9 311 aa13.13□□□□□ -0.31
CDK5RAP3-227ENST00000583352 ZPR1O75312 459 aa13.12□□□□□ -0.31
CDK5RAP3-227ENST00000583352 DDR1Q08345 913 aa13.12□□□□□ -0.31
CDK5RAP3-227ENST00000583352 INTS5Q6P9B9 1019 aaKnown RBP13.12□□□□□ -0.31
CDK5RAP3-227ENST00000583352 DNAJC10Q8IXB1 793 aa13.12□□□□□ -0.31
CDK5RAP3-227ENST00000583352 MIER1Q8N108 512 aa13.12□□□□□ -0.31
CDK5RAP3-227ENST00000583352 ARFGEF1Q9Y6D6 1849 aa13.11□□□□□ -0.31
CDK5RAP3-227ENST00000583352 RNMTO43148 476 aaKnown RBP13.11□□□□□ -0.31
CDK5RAP3-227ENST00000583352 HMOX1P09601 288 aa13.11□□□□□ -0.31
CDK5RAP3-227ENST00000583352 KCNA3P22001 575 aa13.11□□□□□ -0.31
CDK5RAP3-227ENST00000583352 DALRD3Q5D0E6 543 aaKnown RBP13.11□□□□□ -0.31
CDK5RAP3-227ENST00000583352 LGR6Q9HBX8 967 aa13.11□□□□□ -0.31
CDK5RAP3-227ENST00000583352 KIF7Q2M1P5 1343 aa13.11□□□□□ -0.31
CDK5RAP3-227ENST00000583352 MRC1P22897 1456 aa13.1□□□□□ -0.31
CDK5RAP3-227ENST00000583352 POLRMTO00411 1230 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-227ENST00000583352 TOMM70O94826 608 aa13.1□□□□□ -0.31
CDK5RAP3-227ENST00000583352 C9orf131Q5VYM1 1079 aa13.1□□□□□ -0.31
CDK5RAP3-227ENST00000583352 USPL1Q5W0Q7 1092 aa13.1□□□□□ -0.31
CDK5RAP3-227ENST00000583352 SOS1Q07889 1333 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-227ENST00000583352 ADAMTS7Q9UKP4 1686 aa13.09□□□□□ -0.31
CDK5RAP3-227ENST00000583352 DIAPH1O60610 1272 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-227ENST00000583352 CYP19A1P11511 503 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-227ENST00000583352 TM4SF1P30408 202 aa13.09□□□□□ -0.31
CDK5RAP3-227ENST00000583352 APLP1P51693 650 aa13.09□□□□□ -0.31
CDK5RAP3-227ENST00000583352 SLC39A6Q13433 755 aa13.09□□□□□ -0.31
CDK5RAP3-227ENST00000583352 IFFO2Q5TF58 517 aa13.09□□□□□ -0.31
CDK5RAP3-227ENST00000583352 NMRK2Q9NPI5 230 aa13.09□□□□□ -0.31
CDK5RAP3-227ENST00000583352 CHRNA5P30532 468 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms