RNA–Protein interactions for RNA: ENST00000583226.1

NCOR1-223, Transcript of nuclear receptor corepressor 1, human

TSL 5

Gene NCOR1, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCOR1-223	ENST00000583226	PTCH1	Q13635	1447 aa		12.13	□□□□□ -0.47
NCOR1-223	ENST00000583226	USP46	P62068	366 aa		12.13	□□□□□ -0.47
NCOR1-223	ENST00000583226	CROCC2	H7BZ55	1655 aa		12.13	□□□□□ -0.47
NCOR1-223	ENST00000583226	GCC2	Q8IWJ2	1684 aa		12.13	□□□□□ -0.47
NCOR1-223	ENST00000583226	HOXA2	O43364	376 aa		12.12	□□□□□ -0.47
NCOR1-223	ENST00000583226	GUCA2A	Q02747	115 aa		12.12	□□□□□ -0.47
NCOR1-223	ENST00000583226	PDE4D	Q08499	809 aa		12.12	□□□□□ -0.47
NCOR1-223	ENST00000583226	RNF19B	Q6ZMZ0	732 aa		12.12	□□□□□ -0.47
NCOR1-223	ENST00000583226	THAP11	Q96EK4	314 aa		12.11	□□□□□ -0.47
NCOR1-223	ENST00000583226	BEGAIN	Q9BUH8	593 aa		12.11	□□□□□ -0.47
NCOR1-223	ENST00000583226	LAMC1	P11047	1609 aa		12.11	□□□□□ -0.47
NCOR1-223	ENST00000583226	ANKRD30A	Q9BXX3	1397 aa		12.1	□□□□□ -0.47
NCOR1-223	ENST00000583226	SOS2	Q07890	1332 aa	Predicted RBP	12.1	□□□□□ -0.47
NCOR1-223	ENST00000583226	BCL9L	Q86UU0	1499 aa		12.09	□□□□□ -0.47
NCOR1-223	ENST00000583226	XRN1	Q8IZH2	1706 aa	Known RBP	12.09	□□□□□ -0.47
NCOR1-223	ENST00000583226		Q3C1V9	767 aa		12.09	□□□□□ -0.47
NCOR1-223	ENST00000583226	BRICD5	Q6PL45	260 aa		12.09	□□□□□ -0.47
NCOR1-223	ENST00000583226	DAPK1	P53355	1430 aa		12.09	□□□□□ -0.47
NCOR1-223	ENST00000583226	ADGRL3	Q9HAR2	1447 aa		12.09	□□□□□ -0.47
NCOR1-223	ENST00000583226	MS4A1	P11836	297 aa		12.08	□□□□□ -0.48
NCOR1-223	ENST00000583226	GJD4	Q96KN9	370 aa	Predicted RBP	12.08	□□□□□ -0.48
NCOR1-223	ENST00000583226	PRDM9	Q9NQV7	894 aa		12.08	□□□□□ -0.48
NCOR1-223	ENST00000583226	UNC13B	O14795	1591 aa		12.07	□□□□□ -0.48
NCOR1-223	ENST00000583226	KANK4	Q5T7N3	995 aa	Predicted RBP	12.07	□□□□□ -0.48
NCOR1-223	ENST00000583226	DEFB132	Q7Z7B7	95 aa		12.07	□□□□□ -0.48
NCOR1-223	ENST00000583226	SPIRE2	Q8WWL2	714 aa		12.07	□□□□□ -0.48
NCOR1-223	ENST00000583226	IRX2	Q9BZI1	471 aa	Predicted RBP	12.07	□□□□□ -0.48
NCOR1-223	ENST00000583226	HRC	P23327	699 aa		12.06	□□□□□ -0.48
NCOR1-223	ENST00000583226	FAM160A2	Q8N612	972 aa	Predicted RBP	12.06	□□□□□ -0.48
NCOR1-223	ENST00000583226	ANKLE1	Q8NAG6	615 aa		12.06	□□□□□ -0.48
NCOR1-223	ENST00000583226	COL22A1	Q8NFW1	1626 aa	Predicted RBP	12.06	□□□□□ -0.48
NCOR1-223	ENST00000583226	C1orf167	Q5SNV9	1468 aa		12.06	□□□□□ -0.48
NCOR1-223	ENST00000583226	SF3B2	Q13435	895 aa	Known RBP	12.05	□□□□□ -0.48
NCOR1-223	ENST00000583226	SALL2	Q9Y467	1007 aa	Predicted RBP	12.05	□□□□□ -0.48
NCOR1-223	ENST00000583226	MYOM2	P54296	1465 aa		12.05	□□□□□ -0.48
NCOR1-223	ENST00000583226	NDUFV2	P19404	249 aa		12.04	□□□□□ -0.48
NCOR1-223	ENST00000583226	SYMPK	Q92797	1274 aa	Known RBP	12.04	□□□□□ -0.48
NCOR1-223	ENST00000583226	CHIC2	Q9UKJ5	165 aa		12.04	□□□□□ -0.48
NCOR1-223	ENST00000583226	PTPN23	Q9H3S7	1636 aa		12.04	□□□□□ -0.48
NCOR1-223	ENST00000583226	FDX1	P10109	184 aa		12.03	□□□□□ -0.48
NCOR1-223	ENST00000583226	SLC19A1	P41440	591 aa		12.03	□□□□□ -0.48
NCOR1-223	ENST00000583226		V9GY48	417 aa	Predicted RBP	12.03	□□□□□ -0.48
NCOR1-223	ENST00000583226	NRXN3	Q9Y4C0	1643 aa		12.03	□□□□□ -0.48
NCOR1-223	ENST00000583226	MET	P08581	1390 aa		12.03	□□□□□ -0.48
NCOR1-223	ENST00000583226	SPHKAP	Q2M3C7	1700 aa		12.03	□□□□□ -0.48
NCOR1-223	ENST00000583226	MOXD2P	A6NHM9	499 aa		12.02	□□□□□ -0.49
NCOR1-223	ENST00000583226	ORAI2	Q96SN7	254 aa		12.02	□□□□□ -0.49
NCOR1-223	ENST00000583226	USB1	Q9BQ65	265 aa	Known RBP	12.02	□□□□□ -0.49
NCOR1-223	ENST00000583226	FCF1	Q9Y324	198 aa	Known RBP	12.02	□□□□□ -0.49
NCOR1-223	ENST00000583226	NALCN	Q8IZF0	1738 aa		12.02	□□□□□ -0.49
NCOR1-223	ENST00000583226	C6orf229	H3BNL8	230 aa		12.01	□□□□□ -0.49
NCOR1-223	ENST00000583226	TBC1D2	Q9BYX2	928 aa		12.01	□□□□□ -0.49
NCOR1-223	ENST00000583226	VPS8	Q8N3P4	1428 aa		12.01	□□□□□ -0.49
NCOR1-223	ENST00000583226	ANKRD50	Q9ULJ7	1429 aa		12.01	□□□□□ -0.49
NCOR1-223	ENST00000583226	ADGRL2	O95490	1459 aa		12.01	□□□□□ -0.49
NCOR1-223	ENST00000583226	RALGAPB	Q86X10	1494 aa		12.01	□□□□□ -0.49
NCOR1-223	ENST00000583226	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	12	□□□□□ -0.49
NCOR1-223	ENST00000583226	MSS51	Q4VC12	460 aa		12	□□□□□ -0.49
NCOR1-223	ENST00000583226	PLA2G2C	Q5R387	149 aa		12	□□□□□ -0.49
NCOR1-223	ENST00000583226	UNC5CL	Q8IV45	518 aa		12	□□□□□ -0.49
NCOR1-223	ENST00000583226	GLI3	P10071	1580 aa		12	□□□□□ -0.49
NCOR1-223	ENST00000583226	MARF1	Q9Y4F3	1742 aa	Known RBP	12	□□□□□ -0.49
NCOR1-223	ENST00000583226	YY1	P25490	414 aa		11.99	□□□□□ -0.49
NCOR1-223	ENST00000583226	PCDHGC3	Q9UN70	934 aa		11.99	□□□□□ -0.49
NCOR1-223	ENST00000583226	BRWD3	Q6RI45	1802 aa		11.98	□□□□□ -0.49
NCOR1-223	ENST00000583226	LIAT1	Q6ZQX7	453 aa		11.98	□□□□□ -0.49
NCOR1-223	ENST00000583226	EMID1	Q96A84	441 aa	Predicted RBP	11.98	□□□□□ -0.49
NCOR1-223	ENST00000583226	SLIT2	O94813	1529 aa		11.97	□□□□□ -0.49
NCOR1-223	ENST00000583226	NPHP3	Q7Z494	1330 aa		11.97	□□□□□ -0.49
NCOR1-223	ENST00000583226	BAG6	P46379	1132 aa		11.97	□□□□□ -0.49
NCOR1-223	ENST00000583226	SEPT12	Q8IYM1	358 aa		11.97	□□□□□ -0.49
NCOR1-223	ENST00000583226	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.97	□□□□□ -0.49
NCOR1-223	ENST00000583226		E9PCH4	1651 aa		11.97	□□□□□ -0.49
NCOR1-223	ENST00000583226	IQGAP3	Q86VI3	1631 aa		11.97	□□□□□ -0.49
NCOR1-223	ENST00000583226	DIXDC1	Q155Q3	683 aa		11.96	□□□□□ -0.49
NCOR1-223	ENST00000583226	PXDN	Q92626	1479 aa		11.95	□□□□□ -0.5
NCOR1-223	ENST00000583226	GFRA3	O60609	400 aa		11.95	□□□□□ -0.5
NCOR1-223	ENST00000583226	CSPP1	Q1MSJ5	1256 aa		11.95	□□□□□ -0.5
NCOR1-223	ENST00000583226	KRT27	Q7Z3Y8	459 aa		11.95	□□□□□ -0.5
NCOR1-223	ENST00000583226	CCDC24	Q8N4L8	307 aa		11.95	□□□□□ -0.5
NCOR1-223	ENST00000583226	SPRYD7	Q5W111	196 aa		11.94	□□□□□ -0.5
NCOR1-223	ENST00000583226	RETREG3	Q86VR2	466 aa		11.94	□□□□□ -0.5
NCOR1-223	ENST00000583226	VPS72	Q15906	364 aa		11.93	□□□□□ -0.5
NCOR1-223	ENST00000583226	TPRN	Q4KMQ1	711 aa		11.93	□□□□□ -0.5
NCOR1-223	ENST00000583226	ZNF697	Q5TEC3	545 aa		11.93	□□□□□ -0.5
NCOR1-223	ENST00000583226	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.93	□□□□□ -0.5
NCOR1-223	ENST00000583226	PRAG1	Q86YV5	1406 aa		11.93	□□□□□ -0.5
NCOR1-223	ENST00000583226	ROBO2	Q9HCK4	1378 aa		11.92	□□□□□ -0.5
NCOR1-223	ENST00000583226	ZBTB24	O43167	697 aa	Predicted RBP	11.92	□□□□□ -0.5
NCOR1-223	ENST00000583226	MMP16	P51512	607 aa		11.92	□□□□□ -0.5
NCOR1-223	ENST00000583226	R3HDM1	Q15032	1099 aa	Known RBP	11.92	□□□□□ -0.5
NCOR1-223	ENST00000583226	RIC3	Q7Z5B4	369 aa		11.92	□□□□□ -0.5
NCOR1-223	ENST00000583226	KDM4C	Q9H3R0	1056 aa		11.92	□□□□□ -0.5
NCOR1-223	ENST00000583226	PDZRN3	Q9UPQ7	1066 aa		11.92	□□□□□ -0.5
NCOR1-223	ENST00000583226	FOXO3	O43524	673 aa		11.91	□□□□□ -0.5
NCOR1-223	ENST00000583226	DXO	O77932	396 aa	Known RBP	11.91	□□□□□ -0.5
NCOR1-223	ENST00000583226	MTMR2	Q13614	643 aa		11.91	□□□□□ -0.5
NCOR1-223	ENST00000583226	ZNF326	Q5BKZ1	582 aa	Known RBP	11.91	□□□□□ -0.5
NCOR1-223	ENST00000583226	ESCO1	Q5FWF5	840 aa		11.91	□□□□□ -0.5
NCOR1-223	ENST00000583226	PCDHB15	Q9Y5E8	787 aa		11.91	□□□□□ -0.5

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