RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 NCOA4Q13772 614 aa8.85□□□□□ -0.99
COPS3-217ENST00000583160 TLR1Q15399 786 aa8.85□□□□□ -0.99
COPS3-217ENST00000583160 GNASQ5JWF2 1037 aa8.85□□□□□ -0.99
COPS3-217ENST00000583160 TRIM22Q8IYM9 498 aa8.85□□□□□ -0.99
COPS3-217ENST00000583160 DEPDC4Q8N2C3 294 aa8.85□□□□□ -0.99
COPS3-217ENST00000583160 PCDHGA11Q9Y5H2 935 aa8.85□□□□□ -0.99
COPS3-217ENST00000583160 USP17L5A8MUK1 530 aa8.84□□□□□ -0.99
COPS3-217ENST00000583160 DBN1Q16643 649 aa8.84□□□□□ -0.99
COPS3-217ENST00000583160 RNFT1Q5M7Z0 435 aa8.84□□□□□ -0.99
COPS3-217ENST00000583160 GMCL1Q96IK5 515 aa8.84□□□□□ -0.99
COPS3-217ENST00000583160 FAM181BA6NEQ2 426 aa8.83□□□□□ -1
COPS3-217ENST00000583160 TMEM229AB2RXF0 380 aa8.83□□□□□ -1
COPS3-217ENST00000583160 H7C1W4 665 aa8.83□□□□□ -1
COPS3-217ENST00000583160 GTF2IP78347 998 aa8.83□□□□□ -1
COPS3-217ENST00000583160 C4orf17Q53FE4 359 aa8.83□□□□□ -1
COPS3-217ENST00000583160 TBC1D9Q6ZT07 1266 aa8.83□□□□□ -1
COPS3-217ENST00000583160 PPARGC1BQ86YN6 1023 aaKnown RBP8.83□□□□□ -1
COPS3-217ENST00000583160 ZNF837Q96EG3 531 aaPredicted RBP8.83□□□□□ -1
COPS3-217ENST00000583160 UCN2Q96RP3 112 aa8.83□□□□□ -1
COPS3-217ENST00000583160 SERTAD1Q9UHV2 236 aa8.83□□□□□ -1
COPS3-217ENST00000583160 A6NJR5 290 aa8.82□□□□□ -1
COPS3-217ENST00000583160 F11P03951 625 aa8.82□□□□□ -1
COPS3-217ENST00000583160 RHBDD1Q8TEB9 315 aa8.82□□□□□ -1
COPS3-217ENST00000583160 SMTNP53814 917 aa8.81□□□□□ -1
COPS3-217ENST00000583160 A0A1B0GTH6 734 aa8.8□□□□□ -1
COPS3-217ENST00000583160 ATP9BO43861 1147 aa8.8□□□□□ -1
COPS3-217ENST00000583160 PSME1Q06323 249 aa8.8□□□□□ -1
COPS3-217ENST00000583160 FOXR1Q6PIV2 292 aa8.8□□□□□ -1
COPS3-217ENST00000583160 GLMNQ92990 594 aa8.8□□□□□ -1
COPS3-217ENST00000583160 GTPBP3Q969Y2 492 aaKnown RBP8.8□□□□□ -1
COPS3-217ENST00000583160 SLC4A9Q96Q91 983 aa8.8□□□□□ -1
COPS3-217ENST00000583160 GPAMQ9HCL2 828 aa8.8□□□□□ -1
COPS3-217ENST00000583160 USP17L3A6NCW0 530 aa8.79□□□□□ -1
COPS3-217ENST00000583160 USP17L4A6NCW7 530 aa8.79□□□□□ -1
COPS3-217ENST00000583160 GPR25O00155 361 aa8.79□□□□□ -1
COPS3-217ENST00000583160 USP17L2Q6R6M4 530 aa8.79□□□□□ -1
COPS3-217ENST00000583160 USP17L1Q7RTZ2 530 aa8.79□□□□□ -1
COPS3-217ENST00000583160 PLEKHM2Q8IWE5 1019 aa8.79□□□□□ -1
COPS3-217ENST00000583160 NUCKS1Q9H1E3 243 aaKnown RBP8.79□□□□□ -1
COPS3-217ENST00000583160 A6NJY4 79 aa8.78□□□□□ -1
COPS3-217ENST00000583160 MSX1P28360 303 aa8.78□□□□□ -1
COPS3-217ENST00000583160 GAS6Q14393 721 aa8.78□□□□□ -1
COPS3-217ENST00000583160 TRIM50Q86XT4 487 aa8.78□□□□□ -1
COPS3-217ENST00000583160 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.78□□□□□ -1
COPS3-217ENST00000583160 BACH1O14867 736 aa8.77□□□□□ -1.01
COPS3-217ENST00000583160 PLA2G4AP47712 749 aa8.77□□□□□ -1.01
COPS3-217ENST00000583160 MTFR1Q15390 333 aa8.77□□□□□ -1.01
COPS3-217ENST00000583160 CALR3Q96L12 384 aaKnown RBP8.77□□□□□ -1.01
COPS3-217ENST00000583160 NIFKQ9BYG3 293 aaKnown RBP8.77□□□□□ -1.01
COPS3-217ENST00000583160 TFIP11Q9UBB9 837 aaKnown RBP8.77□□□□□ -1.01
COPS3-217ENST00000583160 CDK2AP1O14519 115 aa8.76□□□□□ -1.01
COPS3-217ENST00000583160 ZBTB7BO15156 539 aaPredicted RBP8.76□□□□□ -1.01
COPS3-217ENST00000583160 ATP1A2P50993 1020 aa8.76□□□□□ -1.01
COPS3-217ENST00000583160 TRERF1Q96PN7 1200 aa8.76□□□□□ -1.01
COPS3-217ENST00000583160 RUBCNLQ9H714 662 aa8.76□□□□□ -1.01
COPS3-217ENST00000583160 ZNF358Q9NW07 568 aa8.76□□□□□ -1.01
COPS3-217ENST00000583160 MKRN1Q9UHC7 482 aaKnown RBP8.76□□□□□ -1.01
COPS3-217ENST00000583160 THBS1P07996 1170 aa8.75□□□□□ -1.01
COPS3-217ENST00000583160 SLURP2P0DP57 97 aa8.75□□□□□ -1.01
COPS3-217ENST00000583160 CSB-PGBD3P0DP91 1061 aa8.75□□□□□ -1.01
COPS3-217ENST00000583160 PGBD3Q8N328 593 aa8.75□□□□□ -1.01
COPS3-217ENST00000583160 IQSEC3Q9UPP2 1182 aaPredicted RBP8.75□□□□□ -1.01
COPS3-217ENST00000583160 KIAA1024Q9UPX6 916 aa8.75□□□□□ -1.01
COPS3-217ENST00000583160 ADAMTS2O95450 1211 aa8.74□□□□□ -1.01
COPS3-217ENST00000583160 CLDN10P78369 228 aa8.74□□□□□ -1.01
COPS3-217ENST00000583160 SRSF11Q05519 484 aaKnown RBP8.74□□□□□ -1.01
COPS3-217ENST00000583160 ZNF385CQ66K41 422 aaPredicted RBP8.74□□□□□ -1.01
COPS3-217ENST00000583160 CCDC102BQ68D86 513 aa8.74□□□□□ -1.01
COPS3-217ENST00000583160 AIDAQ96BJ3 306 aa8.74□□□□□ -1.01
COPS3-217ENST00000583160 MBIPQ9NS73 344 aa8.74□□□□□ -1.01
COPS3-217ENST00000583160 USP3Q9Y6I4 520 aa8.74□□□□□ -1.01
COPS3-217ENST00000583160 PALM3A6NDB9 673 aaPredicted RBP8.73□□□□□ -1.01
COPS3-217ENST00000583160 ZNF295-AS1Q8N0V1 137 aa8.73□□□□□ -1.01
COPS3-217ENST00000583160 OGFOD1Q8N543 542 aa8.73□□□□□ -1.01
COPS3-217ENST00000583160 TPCN2Q8NHX9 752 aa8.73□□□□□ -1.01
COPS3-217ENST00000583160 WHAMMQ8TF30 809 aa8.73□□□□□ -1.01
COPS3-217ENST00000583160 DNAAF2Q9NVR5 837 aaKnown RBP8.73□□□□□ -1.01
COPS3-217ENST00000583160 CABP1Q9NZU7 370 aa8.73□□□□□ -1.01
COPS3-217ENST00000583160 LBRQ14739 615 aaKnown RBP8.72□□□□□ -1.01
COPS3-217ENST00000583160 EFHC2Q5JST6 749 aa8.72□□□□□ -1.01
COPS3-217ENST00000583160 LARGE2Q8N3Y3 721 aa8.72□□□□□ -1.01
COPS3-217ENST00000583160 SVOPQ8N4V2 548 aa8.72□□□□□ -1.01
COPS3-217ENST00000583160 PPP1R12CQ9BZL4 782 aa8.72□□□□□ -1.01
COPS3-217ENST00000583160 ZNF777Q9ULD5 760 aaPredicted RBP8.72□□□□□ -1.01
COPS3-217ENST00000583160 MAFBQ9Y5Q3 323 aaPredicted RBP8.72□□□□□ -1.01
COPS3-217ENST00000583160 TNS4Q8IZW8 715 aa8.71□□□□□ -1.02
COPS3-217ENST00000583160 C1orf216Q8TAB5 229 aa8.71□□□□□ -1.02
COPS3-217ENST00000583160 CFHR5Q9BXR6 569 aa8.71□□□□□ -1.02
COPS3-217ENST00000583160 CRISPLD1Q9H336 500 aa8.71□□□□□ -1.02
COPS3-217ENST00000583160 SCHIP1Q9P0W5 487 aaPredicted RBP8.71□□□□□ -1.02
COPS3-217ENST00000583160 IGF1RP08069 1367 aa8.71□□□□□ -1.02
COPS3-217ENST00000583160 MX2P20592 715 aa8.7□□□□□ -1.02
COPS3-217ENST00000583160 ATP4AP20648 1035 aa8.7□□□□□ -1.02
COPS3-217ENST00000583160 EPHA4P54764 986 aa8.7□□□□□ -1.02
COPS3-217ENST00000583160 UBAP2LQ14157 1087 aaKnown RBP8.7□□□□□ -1.02
COPS3-217ENST00000583160 LYPD4Q6UWN0 246 aa8.7□□□□□ -1.02
COPS3-217ENST00000583160 PHF24Q9UPV7 400 aa8.7□□□□□ -1.02
COPS3-217ENST00000583160 PARP3Q9Y6F1 533 aa8.7□□□□□ -1.02
COPS3-217ENST00000583160 RASA1P20936 1047 aa8.69□□□□□ -1.02
COPS3-217ENST00000583160 FOXK2Q01167 660 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms