RNA–Protein interactions for RNA: ENST00000582914.1

RARA-210, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-210ENST00000582914 EYA1Q99502 592 aa16.33■□□□□ 0.2
RARA-210ENST00000582914 CARD14Q9BXL6 1004 aa16.33■□□□□ 0.2
RARA-210ENST00000582914 C4AP0C0L4 1744 aa16.33■□□□□ 0.2
RARA-210ENST00000582914 TGFB2P61812 414 aa16.32■□□□□ 0.2
RARA-210ENST00000582914 ZNF526Q8TF50 670 aaPredicted RBP16.32■□□□□ 0.2
RARA-210ENST00000582914 PXDNLA1KZ92 1463 aa16.31■□□□□ 0.2
RARA-210ENST00000582914 KDRP35968 1356 aa16.31■□□□□ 0.2
RARA-210ENST00000582914 HSP90AB1P08238 724 aaKnown RBP16.31■□□□□ 0.2
RARA-210ENST00000582914 ADRA2BP18089 450 aa16.31■□□□□ 0.2
RARA-210ENST00000582914 NLGN1Q8N2Q7 840 aa16.31■□□□□ 0.2
RARA-210ENST00000582914 ASAP1Q9ULH1 1129 aa16.31■□□□□ 0.2
RARA-210ENST00000582914 MMP10P09238 476 aa16.3■□□□□ 0.2
RARA-210ENST00000582914 ITPK1Q13572 414 aa16.3■□□□□ 0.2
RARA-210ENST00000582914 RTCBQ9Y3I0 505 aaKnown RBP16.3■□□□□ 0.2
RARA-210ENST00000582914 C10orf71Q711Q0 1435 aa16.29■□□□□ 0.2
RARA-210ENST00000582914 ERVV-2B6SEH9 535 aa16.29■□□□□ 0.2
RARA-210ENST00000582914 TRAPPC3LQ5T215 181 aa16.29■□□□□ 0.2
RARA-210ENST00000582914 RC3H1Q5TC82 1133 aaKnown RBP16.29■□□□□ 0.2
RARA-210ENST00000582914 ATG3Q9NT62 314 aa16.29■□□□□ 0.2
RARA-210ENST00000582914 MYH14Q7Z406 1995 aaKnown RBP16.29■□□□□ 0.2
RARA-210ENST00000582914 KIF3CO14782 793 aa16.28■□□□□ 0.2
RARA-210ENST00000582914 CCDC87Q9NVE4 849 aa16.28■□□□□ 0.2
RARA-210ENST00000582914 POLKQ9UBT6 870 aa16.28■□□□□ 0.2
RARA-210ENST00000582914 TIMELESSQ9UNS1 1208 aa16.28■□□□□ 0.2
RARA-210ENST00000582914 CNTNAP4Q9C0A0 1308 aa16.27■□□□□ 0.2
RARA-210ENST00000582914 APLP1P51693 650 aa16.27■□□□□ 0.2
RARA-210ENST00000582914 SMIM5Q71RC9 77 aa16.27■□□□□ 0.2
RARA-210ENST00000582914 WDR90Q96KV7 1748 aa16.26■□□□□ 0.19
RARA-210ENST00000582914 DCAF5Q96JK2 942 aa16.26■□□□□ 0.19
RARA-210ENST00000582914 WWC3Q9ULE0 1092 aa16.26■□□□□ 0.19
RARA-210ENST00000582914 SCN11AQ9UI33 1791 aa16.26■□□□□ 0.19
RARA-210ENST00000582914 VIRMAQ69YN4 1812 aaKnown RBP16.25■□□□□ 0.19
RARA-210ENST00000582914 TOMM70O94826 608 aa16.25■□□□□ 0.19
RARA-210ENST00000582914 EIF4A2Q14240 407 aaKnown RBP16.25■□□□□ 0.19
RARA-210ENST00000582914 AMOTQ4VCS5 1084 aa16.25■□□□□ 0.19
RARA-210ENST00000582914 BCS1LQ9Y276 419 aa16.25■□□□□ 0.19
RARA-210ENST00000582914 RPS6KA4O75676 772 aa16.24■□□□□ 0.19
RARA-210ENST00000582914 RFC4P35249 363 aa16.24■□□□□ 0.19
RARA-210ENST00000582914 PLEKHO1Q53GL0 409 aaPredicted RBP16.24■□□□□ 0.19
RARA-210ENST00000582914 PARP3Q9Y6F1 533 aa16.24■□□□□ 0.19
RARA-210ENST00000582914 TNRC6CQ9HCJ0 1690 aaKnown RBP16.24■□□□□ 0.19
RARA-210ENST00000582914 SBF1O95248 1867 aa16.23■□□□□ 0.19
RARA-210ENST00000582914 ARHGEF1Q92888 912 aaKnown RBP16.23■□□□□ 0.19
RARA-210ENST00000582914 RBM42Q9BTD8 480 aaKnown RBP16.23■□□□□ 0.19
RARA-210ENST00000582914 TJP1Q07157 1748 aa16.22■□□□□ 0.19
RARA-210ENST00000582914 GYS1P13807 737 aa16.22■□□□□ 0.19
RARA-210ENST00000582914 A0A0G2JLW4 131 aa16.21■□□□□ 0.19
RARA-210ENST00000582914 FCHSD2O94868 740 aa16.21■□□□□ 0.19
RARA-210ENST00000582914 CABP4P57796 275 aa16.21■□□□□ 0.19
RARA-210ENST00000582914 ARHGAP27Q6ZUM4 889 aa16.21■□□□□ 0.19
RARA-210ENST00000582914 KDM6AO15550 1401 aaPredicted RBP16.2■□□□□ 0.18
RARA-210ENST00000582914 SLC4A9Q96Q91 983 aa16.2■□□□□ 0.18
RARA-210ENST00000582914 DPEP1P16444 411 aa16.19■□□□□ 0.18
RARA-210ENST00000582914 C1orf141Q5JVX7 400 aa16.19■□□□□ 0.18
RARA-210ENST00000582914 ZNF530Q6P9A1 599 aaPredicted RBP16.19■□□□□ 0.18
RARA-210ENST00000582914 PIM2Q9P1W9 311 aa16.19■□□□□ 0.18
RARA-210ENST00000582914 DLEC1Q9Y238 1755 aa16.18■□□□□ 0.18
RARA-210ENST00000582914 C16orf71Q8IYS4 520 aaPredicted RBP16.18■□□□□ 0.18
RARA-210ENST00000582914 RBM46Q8TBY0 533 aaKnown RBP16.18■□□□□ 0.18
RARA-210ENST00000582914 KDM2BQ8NHM5 1336 aa16.18■□□□□ 0.18
RARA-210ENST00000582914 CLSPNQ9HAW4 1339 aa16.18■□□□□ 0.18
RARA-210ENST00000582914 ADAMTS7Q9UKP4 1686 aa16.18■□□□□ 0.18
RARA-210ENST00000582914 AFDNP55196 1824 aaKnown RBP16.17■□□□□ 0.18
RARA-210ENST00000582914 TNNT2P45379 298 aaPredicted RBP16.17■□□□□ 0.18
RARA-210ENST00000582914 MTHFSP49914 203 aa16.17■□□□□ 0.18
RARA-210ENST00000582914 DALRD3Q5D0E6 543 aaKnown RBP16.16■□□□□ 0.18
RARA-210ENST00000582914 USP42Q9H9J4 1324 aaKnown RBP16.16■□□□□ 0.18
RARA-210ENST00000582914 KCNA3P22001 575 aa16.15■□□□□ 0.18
RARA-210ENST00000582914 CRKLP46109 303 aaKnown RBP16.15■□□□□ 0.18
RARA-210ENST00000582914 FSTL1Q12841 308 aa16.15■□□□□ 0.18
RARA-210ENST00000582914 CCDC88AQ3V6T2 1871 aa16.15■□□□□ 0.18
RARA-210ENST00000582914 C9orf131Q5VYM1 1079 aa16.15■□□□□ 0.18
RARA-210ENST00000582914 NMRK2Q9NPI5 230 aa16.15■□□□□ 0.18
RARA-210ENST00000582914 NRXN2Q9P2S2 1712 aa16.15■□□□□ 0.18
RARA-210ENST00000582914 ZC3H4Q9UPT8 1303 aaKnown RBP16.15■□□□□ 0.18
RARA-210ENST00000582914 TRIM26Q12899 539 aaPredicted RBP16.14■□□□□ 0.17
RARA-210ENST00000582914 DNAJC5GQ8N7S2 189 aa16.14■□□□□ 0.17
RARA-210ENST00000582914 POLR3GLQ9BT43 218 aa16.14■□□□□ 0.17
RARA-210ENST00000582914 PTCD1O75127 700 aaKnown RBP16.13■□□□□ 0.17
RARA-210ENST00000582914 NFATC2IPQ8NCF5 419 aa16.12■□□□□ 0.17
RARA-210ENST00000582914 KCPQ6ZWJ8 1503 aa16.12■□□□□ 0.17
RARA-210ENST00000582914 TIAM2Q8IVF5 1701 aa16.11■□□□□ 0.17
RARA-210ENST00000582914 MRC1P22897 1456 aa16.11■□□□□ 0.17
RARA-210ENST00000582914 ZPR1O75312 459 aa16.11■□□□□ 0.17
RARA-210ENST00000582914 EIF4G2P78344 907 aaKnown RBP eCLIP16.11■□□□□ 0.17
RARA-210ENST00000582914 FKBP8Q14318 412 aa16.11■□□□□ 0.17
RARA-210ENST00000582914 PANK3Q9H999 370 aa16.11■□□□□ 0.17
RARA-210ENST00000582914 RNF181Q9P0P0 153 aa16.11■□□□□ 0.17
RARA-210ENST00000582914 UBR2Q8IWV8 1755 aa16.1■□□□□ 0.17
RARA-210ENST00000582914 POLRMTO00411 1230 aaKnown RBP16.1■□□□□ 0.17
RARA-210ENST00000582914 DDR1Q08345 913 aa16.1■□□□□ 0.17
RARA-210ENST00000582914 AKAP4Q5JQC9 854 aa16.1■□□□□ 0.17
RARA-210ENST00000582914 MORC1Q86VD1 984 aa16.1■□□□□ 0.17
RARA-210ENST00000582914 KLRG1Q96E93 195 aa16.1■□□□□ 0.17
RARA-210ENST00000582914 SRP68Q9UHB9 627 aaKnown RBP16.1■□□□□ 0.17
RARA-210ENST00000582914 DICER1Q9UPY3 1922 aaKnown RBP16.09■□□□□ 0.17
RARA-210ENST00000582914 TM4SF1P30408 202 aa16.09■□□□□ 0.17
RARA-210ENST00000582914 SULT6B1Q6IMI4 303 aa16.09■□□□□ 0.17
RARA-210ENST00000582914 AEBP1Q8IUX7 1158 aa16.09■□□□□ 0.17
RARA-210ENST00000582914 INTS5Q6P9B9 1019 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms