RNA–Protein interactions for RNA: ENST00000582303.1

CDC42EP4-208, Transcript of CDC42 effector protein 4, humanhuman

TSL 5

Gene CDC42EP4, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-208ENST00000582303 RTCBQ9Y3I0 505 aaKnown RBP19.92■□□□□ 0.78
CDC42EP4-208ENST00000582303 TAF1LQ8IZX4 1826 aa19.92■□□□□ 0.78
CDC42EP4-208ENST00000582303 ITGB4P16144 1822 aa19.91■□□□□ 0.78
CDC42EP4-208ENST00000582303 HSPA5P11021 654 aaKnown RBP19.91■□□□□ 0.78
CDC42EP4-208ENST00000582303 TRAPPC3LQ5T215 181 aa19.91■□□□□ 0.78
CDC42EP4-208ENST00000582303 MORC1Q86VD1 984 aa19.91■□□□□ 0.78
CDC42EP4-208ENST00000582303 ADRA2BP18089 450 aa19.9■□□□□ 0.78
CDC42EP4-208ENST00000582303 ITPK1Q13572 414 aa19.9■□□□□ 0.78
CDC42EP4-208ENST00000582303 C1orf141Q5JVX7 400 aa19.9■□□□□ 0.78
CDC42EP4-208ENST00000582303 NLGN1Q8N2Q7 840 aa19.9■□□□□ 0.78
CDC42EP4-208ENST00000582303 KNSTRNQ9Y448 316 aa19.9■□□□□ 0.78
CDC42EP4-208ENST00000582303 MAP2P11137 1827 aaKnown RBP19.9■□□□□ 0.78
CDC42EP4-208ENST00000582303 CABP4P57796 275 aa19.89■□□□□ 0.77
CDC42EP4-208ENST00000582303 RC3H1Q5TC82 1133 aaKnown RBP19.89■□□□□ 0.77
CDC42EP4-208ENST00000582303 ZNF530Q6P9A1 599 aaPredicted RBP19.89■□□□□ 0.77
CDC42EP4-208ENST00000582303 AMIGO3Q86WK7 504 aa19.89■□□□□ 0.77
CDC42EP4-208ENST00000582303 RBM42Q9BTD8 480 aaKnown RBP19.89■□□□□ 0.77
CDC42EP4-208ENST00000582303 GPBP1L1Q9HC44 474 aaPredicted RBP19.88■□□□□ 0.77
CDC42EP4-208ENST00000582303 MTHFSP49914 203 aa19.87■□□□□ 0.77
CDC42EP4-208ENST00000582303 CCER1Q8TC90 406 aaPredicted RBP19.87■□□□□ 0.77
CDC42EP4-208ENST00000582303 MMP10P09238 476 aa19.86■□□□□ 0.77
CDC42EP4-208ENST00000582303 UBR3Q6ZT12 1888 aa19.86■□□□□ 0.77
CDC42EP4-208ENST00000582303 ATP10DQ9P241 1426 aa19.85■□□□□ 0.77
CDC42EP4-208ENST00000582303 KDRP35968 1356 aa19.85■□□□□ 0.77
CDC42EP4-208ENST00000582303 CNTNAP4Q9C0A0 1308 aa19.85■□□□□ 0.77
CDC42EP4-208ENST00000582303 RFC4P35249 363 aa19.85■□□□□ 0.77
CDC42EP4-208ENST00000582303 TGFB2P61812 414 aa19.85■□□□□ 0.77
CDC42EP4-208ENST00000582303 SMIM5Q71RC9 77 aa19.84■□□□□ 0.77
CDC42EP4-208ENST00000582303 RPS6KA4O75676 772 aa19.83■□□□□ 0.77
CDC42EP4-208ENST00000582303 CCDC87Q9NVE4 849 aa19.83■□□□□ 0.77
CDC42EP4-208ENST00000582303 SULT6B1Q6IMI4 303 aa19.82■□□□□ 0.76
CDC42EP4-208ENST00000582303 ARHGEF1Q92888 912 aaKnown RBP19.81■□□□□ 0.76
CDC42EP4-208ENST00000582303 PARP3Q9Y6F1 533 aa19.81■□□□□ 0.76
CDC42EP4-208ENST00000582303 ADCY9O60503 1353 aa19.81■□□□□ 0.76
CDC42EP4-208ENST00000582303 KDM6AO15550 1401 aaPredicted RBP19.8■□□□□ 0.76
CDC42EP4-208ENST00000582303 ZNF831Q5JPB2 1677 aa19.8■□□□□ 0.76
CDC42EP4-208ENST00000582303 PTCD1O75127 700 aaKnown RBP19.79■□□□□ 0.76
CDC42EP4-208ENST00000582303 AEBP1Q8IUX7 1158 aa19.79■□□□□ 0.76
CDC42EP4-208ENST00000582303 NFATC2IPQ8NCF5 419 aa19.79■□□□□ 0.76
CDC42EP4-208ENST00000582303 SLC4A9Q96Q91 983 aa19.79■□□□□ 0.76
CDC42EP4-208ENST00000582303 CEP350Q5VT06 3117 aa19.79■□□□□ 0.76
CDC42EP4-208ENST00000582303 GYS1P13807 737 aa19.78■□□□□ 0.76
CDC42EP4-208ENST00000582303 IL13P35225 146 aa19.77■□□□□ 0.76
CDC42EP4-208ENST00000582303 AKAP4Q5JQC9 854 aa19.77■□□□□ 0.76
CDC42EP4-208ENST00000582303 WWC3Q9ULE0 1092 aa19.77■□□□□ 0.76
CDC42EP4-208ENST00000582303 ZNF526Q8TF50 670 aaPredicted RBP19.76■□□□□ 0.75
CDC42EP4-208ENST00000582303 BCS1LQ9Y276 419 aa19.76■□□□□ 0.75
CDC42EP4-208ENST00000582303 C10orf71Q711Q0 1435 aa19.76■□□□□ 0.75
CDC42EP4-208ENST00000582303 PXDNLA1KZ92 1463 aa19.75■□□□□ 0.75
CDC42EP4-208ENST00000582303 CRKLP46109 303 aaKnown RBP19.75■□□□□ 0.75
CDC42EP4-208ENST00000582303 CICQ96RK0 1608 aaPredicted RBP19.74■□□□□ 0.75
CDC42EP4-208ENST00000582303 AMER1Q5JTC6 1135 aaPredicted RBP19.74■□□□□ 0.75
CDC42EP4-208ENST00000582303 A0A0G2JLW4 131 aa19.73■□□□□ 0.75
CDC42EP4-208ENST00000582303 FCHSD2O94868 740 aa19.72■□□□□ 0.75
CDC42EP4-208ENST00000582303 SLC52A2Q9HAB3 445 aa19.72■□□□□ 0.75
CDC42EP4-208ENST00000582303 USP42Q9H9J4 1324 aaKnown RBP19.72■□□□□ 0.75
CDC42EP4-208ENST00000582303 ZPR1O75312 459 aa19.71■□□□□ 0.75
CDC42EP4-208ENST00000582303 HSPA6P17066 643 aa19.71■□□□□ 0.75
CDC42EP4-208ENST00000582303 ARHGAP27Q6ZUM4 889 aa19.71■□□□□ 0.75
CDC42EP4-208ENST00000582303 PIM2Q9P1W9 311 aa19.71■□□□□ 0.75
CDC42EP4-208ENST00000582303 DPEP1P16444 411 aa19.7■□□□□ 0.74
CDC42EP4-208ENST00000582303 KIF7Q2M1P5 1343 aa19.7■□□□□ 0.74
CDC42EP4-208ENST00000582303 COL5A3P25940 1745 aaPredicted RBP19.69■□□□□ 0.74
CDC42EP4-208ENST00000582303 DIAPH1O60610 1272 aaKnown RBP19.69■□□□□ 0.74
CDC42EP4-208ENST00000582303 C4AP0C0L4 1744 aa19.68■□□□□ 0.74
CDC42EP4-208ENST00000582303 DALRD3Q5D0E6 543 aaKnown RBP19.68■□□□□ 0.74
CDC42EP4-208ENST00000582303 KIF13BQ9NQT8 1826 aa19.67■□□□□ 0.74
CDC42EP4-208ENST00000582303 RNMTO43148 476 aaKnown RBP19.67■□□□□ 0.74
CDC42EP4-208ENST00000582303 INTS5Q6P9B9 1019 aaKnown RBP19.67■□□□□ 0.74
CDC42EP4-208ENST00000582303 VSIG10Q8N0Z9 540 aa19.67■□□□□ 0.74
CDC42EP4-208ENST00000582303 HMOX1P09601 288 aa19.66■□□□□ 0.74
CDC42EP4-208ENST00000582303 FKBP8Q14318 412 aa19.66■□□□□ 0.74
CDC42EP4-208ENST00000582303 SRP68Q9UHB9 627 aaKnown RBP19.66■□□□□ 0.74
CDC42EP4-208ENST00000582303 KIF3CO14782 793 aa19.65■□□□□ 0.74
CDC42EP4-208ENST00000582303 DNAJC10Q8IXB1 793 aa19.65■□□□□ 0.74
CDC42EP4-208ENST00000582303 LGR6Q9HBX8 967 aa19.65■□□□□ 0.74
CDC42EP4-208ENST00000582303 TOMM70O94826 608 aa19.64■□□□□ 0.73
CDC42EP4-208ENST00000582303 TTC5Q8N0Z6 440 aa19.64■□□□□ 0.73
CDC42EP4-208ENST00000582303 MRC1P22897 1456 aa19.63■□□□□ 0.73
CDC42EP4-208ENST00000582303 SOS1Q07889 1333 aaPredicted RBP19.63■□□□□ 0.73
CDC42EP4-208ENST00000582303 PER1O15534 1290 aaPredicted RBP19.63■□□□□ 0.73
CDC42EP4-208ENST00000582303 STARD3NLO95772 234 aa19.63■□□□□ 0.73
CDC42EP4-208ENST00000582303 CYP19A1P11511 503 aaPredicted RBP19.63■□□□□ 0.73
CDC42EP4-208ENST00000582303 KCNA3P22001 575 aa19.63■□□□□ 0.73
CDC42EP4-208ENST00000582303 MTHFSDQ2M296 383 aaKnown RBP19.63■□□□□ 0.73
CDC42EP4-208ENST00000582303 CC2D1BQ5T0F9 858 aaKnown RBP19.63■□□□□ 0.73
CDC42EP4-208ENST00000582303 NARFQ9UHQ1 456 aa19.63■□□□□ 0.73
CDC42EP4-208ENST00000582303 NPC1L1Q9UHC9 1359 aa19.62■□□□□ 0.73
CDC42EP4-208ENST00000582303 POLRMTO00411 1230 aaKnown RBP19.62■□□□□ 0.73
CDC42EP4-208ENST00000582303 TM4SF1P30408 202 aa19.62■□□□□ 0.73
CDC42EP4-208ENST00000582303 DDR1Q08345 913 aa19.62■□□□□ 0.73
CDC42EP4-208ENST00000582303 USPL1Q5W0Q7 1092 aa19.62■□□□□ 0.73
CDC42EP4-208ENST00000582303 APLP1P51693 650 aa19.61■□□□□ 0.73
CDC42EP4-208ENST00000582303 SLC39A6Q13433 755 aa19.61■□□□□ 0.73
CDC42EP4-208ENST00000582303 C9orf131Q5VYM1 1079 aa19.61■□□□□ 0.73
CDC42EP4-208ENST00000582303 C16orf71Q8IYS4 520 aaPredicted RBP19.61■□□□□ 0.73
CDC42EP4-208ENST00000582303 GAS2L2Q8NHY3 880 aa19.61■□□□□ 0.73
CDC42EP4-208ENST00000582303 TEX13AQ9BXU3 409 aaPredicted RBP19.61■□□□□ 0.73
CDC42EP4-208ENST00000582303 MYH14Q7Z406 1995 aaKnown RBP19.61■□□□□ 0.73
CDC42EP4-208ENST00000582303 SCN11AQ9UI33 1791 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms