RNA–Protein interactions for RNA: ENST00000582084.1

SSH2-210, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 3 BASIC

Gene SSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-210ENST00000582084 ZNF530Q6P9A1 599 aaPredicted RBP21.49■■□□□ 1.03
SSH2-210ENST00000582084 COL24A1Q17RW2 1714 aa21.49■■□□□ 1.03
SSH2-210ENST00000582084 COL3A1P02461 1466 aaPredicted RBP21.48■■□□□ 1.03
SSH2-210ENST00000582084 ATP6V1AP38606 617 aa21.48■■□□□ 1.03
SSH2-210ENST00000582084 DCAF5Q96JK2 942 aa21.48■■□□□ 1.03
SSH2-210ENST00000582084 ATG3Q9NT62 314 aa21.48■■□□□ 1.03
SSH2-210ENST00000582084 TAF1LQ8IZX4 1826 aa21.48■■□□□ 1.03
SSH2-210ENST00000582084 ERVV-2B6SEH9 535 aa21.47■■□□□ 1.03
SSH2-210ENST00000582084 C1orf141Q5JVX7 400 aa21.47■■□□□ 1.03
SSH2-210ENST00000582084 SMIM5Q71RC9 77 aa21.47■■□□□ 1.03
SSH2-210ENST00000582084 LINC00116Q8NCU8 138 aa21.47■■□□□ 1.03
SSH2-210ENST00000582084 NLGN2Q8NFZ4 835 aa21.47■■□□□ 1.03
SSH2-210ENST00000582084 C4BP0C0L5 1744 aa21.46■■□□□ 1.03
SSH2-210ENST00000582084 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.46■■□□□ 1.03
SSH2-210ENST00000582084 HMOX1P09601 288 aa21.46■■□□□ 1.03
SSH2-210ENST00000582084 ITPK1Q13572 414 aa21.45■■□□□ 1.02
SSH2-210ENST00000582084 AMIGO3Q86WK7 504 aa21.45■■□□□ 1.02
SSH2-210ENST00000582084 U2SURPO15042 1029 aaKnown RBP21.44■■□□□ 1.02
SSH2-210ENST00000582084 RBM42Q9BTD8 480 aaKnown RBP21.44■■□□□ 1.02
SSH2-210ENST00000582084 NUDCQ9Y266 331 aa21.44■■□□□ 1.02
SSH2-210ENST00000582084 GNPATO15228 680 aa21.43■■□□□ 1.02
SSH2-210ENST00000582084 SSFA2P28290 1259 aa21.43■■□□□ 1.02
SSH2-210ENST00000582084 CABP4P57796 275 aa21.43■■□□□ 1.02
SSH2-210ENST00000582084 DDX10Q13206 875 aaKnown RBP21.43■■□□□ 1.02
SSH2-210ENST00000582084 AKAP4Q5JQC9 854 aa21.42■■□□□ 1.02
SSH2-210ENST00000582084 ZNF784Q8NCA9 323 aaPredicted RBP21.42■■□□□ 1.02
SSH2-210ENST00000582084 KDM6AO15550 1401 aaPredicted RBP21.4■■□□□ 1.02
SSH2-210ENST00000582084 CD2APQ9Y5K6 639 aa21.4■■□□□ 1.02
SSH2-210ENST00000582084 RALBP1Q15311 655 aa21.39■■□□□ 1.01
SSH2-210ENST00000582084 CHD4Q14839 1912 aa21.38■■□□□ 1.01
SSH2-210ENST00000582084 MTHFSDQ2M296 383 aaKnown RBP21.38■■□□□ 1.01
SSH2-210ENST00000582084 NFATC2IPQ8NCF5 419 aa21.38■■□□□ 1.01
SSH2-210ENST00000582084 UBR3Q6ZT12 1888 aa21.38■■□□□ 1.01
SSH2-210ENST00000582084 SLC4A9Q96Q91 983 aa21.37■■□□□ 1.01
SSH2-210ENST00000582084 UTRNP46939 3433 aa21.37■■□□□ 1.01
SSH2-210ENST00000582084 GRIN3BO60391 1043 aa21.36■■□□□ 1.01
SSH2-210ENST00000582084 PTCD1O75127 700 aaKnown RBP21.36■■□□□ 1.01
SSH2-210ENST00000582084 YBX3P16989 372 aaKnown RBP eCLIP21.36■■□□□ 1.01
SSH2-210ENST00000582084 TRAPPC3LQ5T215 181 aa21.36■■□□□ 1.01
SSH2-210ENST00000582084 RTCBQ9Y3I0 505 aaKnown RBP21.36■■□□□ 1.01
SSH2-210ENST00000582084 U2AF1L5P0DN76 240 aaPredicted RBP21.35■■□□□ 1.01
SSH2-210ENST00000582084 U2AF1Q01081 240 aaKnown RBP eCLIP21.35■■□□□ 1.01
SSH2-210ENST00000582084 GAS2L2Q8NHY3 880 aa21.35■■□□□ 1.01
SSH2-210ENST00000582084 FCHSD2O94868 740 aa21.34■■□□□ 1.01
SSH2-210ENST00000582084 RSPH6AQ9H0K4 717 aa21.34■■□□□ 1.01
SSH2-210ENST00000582084 RC3H1Q5TC82 1133 aaKnown RBP21.33■■□□□ 1.01
SSH2-210ENST00000582084 RNMTO43148 476 aaKnown RBP21.32■■□□□ 1
SSH2-210ENST00000582084 PRKAR2BP31323 418 aa21.32■■□□□ 1
SSH2-210ENST00000582084 LGR6Q9HBX8 967 aa21.32■■□□□ 1
SSH2-210ENST00000582084 ARHGEF1Q92888 912 aaKnown RBP21.31■■□□□ 1
SSH2-210ENST00000582084 SLC52A2Q9HAB3 445 aa21.31■■□□□ 1
SSH2-210ENST00000582084 CNTNAP4Q9C0A0 1308 aa21.3■■□□□ 1
SSH2-210ENST00000582084 RPS6KA4O75676 772 aa21.3■■□□□ 1
SSH2-210ENST00000582084 MMP10P09238 476 aa21.3■■□□□ 1
SSH2-210ENST00000582084 RFC4P35249 363 aa21.3■■□□□ 1
SSH2-210ENST00000582084 NLGN1Q8N2Q7 840 aa21.3■■□□□ 1
SSH2-210ENST00000582084 GNAT3A8MTJ3 354 aa21.29■■□□□ 1
SSH2-210ENST00000582084 ADRA2BP18089 450 aa21.29■■□□□ 1
SSH2-210ENST00000582084 PHACTR3Q96KR7 559 aa21.29■■□□□ 1
SSH2-210ENST00000582084 WWC3Q9ULE0 1092 aa21.29■■□□□ 1
SSH2-210ENST00000582084 SCN11AQ9UI33 1791 aa21.28■■□□□ 1
SSH2-210ENST00000582084 ZNF831Q5JPB2 1677 aa21.28■■□□□ 1
SSH2-210ENST00000582084 MYBBP1AQ9BQG0 1328 aaKnown RBP21.27■□□□□ 0.99
SSH2-210ENST00000582084 MRC1P22897 1456 aa21.26■□□□□ 0.99
SSH2-210ENST00000582084 CRKLP46109 303 aaKnown RBP21.26■□□□□ 0.99
SSH2-210ENST00000582084 ADAMTS7Q9UKP4 1686 aa21.25■□□□□ 0.99
SSH2-210ENST00000582084 GOLGB1Q14789 3259 aaKnown RBP21.24■□□□□ 0.99
SSH2-210ENST00000582084 GYS1P13807 737 aa21.24■□□□□ 0.99
SSH2-210ENST00000582084 IL17REQ8NFR9 667 aa21.24■□□□□ 0.99
SSH2-210ENST00000582084 COL5A3P25940 1745 aaPredicted RBP21.24■□□□□ 0.99
SSH2-210ENST00000582084 NEFMP07197 916 aa21.23■□□□□ 0.99
SSH2-210ENST00000582084 SLC39A6Q13433 755 aa21.23■□□□□ 0.99
SSH2-210ENST00000582084 PNNQ9H307 717 aaKnown RBP21.23■□□□□ 0.99
SSH2-210ENST00000582084 TEFQ10587 303 aa21.22■□□□□ 0.99
SSH2-210ENST00000582084 PRKRIP1Q9H875 184 aaPredicted RBP21.22■□□□□ 0.99
SSH2-210ENST00000582084 PARP3Q9Y6F1 533 aa21.22■□□□□ 0.99
SSH2-210ENST00000582084 ZNF316A6NFI3 1004 aaPredicted RBP21.21■□□□□ 0.99
SSH2-210ENST00000582084 HTATSF1O43719 755 aaKnown RBP21.21■□□□□ 0.99
SSH2-210ENST00000582084 INTS5Q6P9B9 1019 aaKnown RBP21.21■□□□□ 0.99
SSH2-210ENST00000582084 DNAJC10Q8IXB1 793 aa21.21■□□□□ 0.99
SSH2-210ENST00000582084 MYH14Q7Z406 1995 aaKnown RBP21.21■□□□□ 0.99
SSH2-210ENST00000582084 CEMIPQ8WUJ3 1361 aa21.21■□□□□ 0.99
SSH2-210ENST00000582084 C1QTNF8P60827 252 aa21.2■□□□□ 0.98
SSH2-210ENST00000582084 RTF1Q92541 710 aaKnown RBP21.2■□□□□ 0.98
SSH2-210ENST00000582084 CCDC87Q9NVE4 849 aa21.2■□□□□ 0.98
SSH2-210ENST00000582084 SRP68Q9UHB9 627 aaKnown RBP21.2■□□□□ 0.98
SSH2-210ENST00000582084 A0A0G2JLW4 131 aa21.19■□□□□ 0.98
SSH2-210ENST00000582084 GIGYF1O75420 1035 aaPredicted RBP21.19■□□□□ 0.98
SSH2-210ENST00000582084 TGFB2P61812 414 aa21.19■□□□□ 0.98
SSH2-210ENST00000582084 PLEKHF1Q96S99 279 aa21.19■□□□□ 0.98
SSH2-210ENST00000582084 CICQ96RK0 1608 aaPredicted RBP21.18■□□□□ 0.98
SSH2-210ENST00000582084 TTC5Q8N0Z6 440 aa21.18■□□□□ 0.98
SSH2-210ENST00000582084 VSIG10Q8N0Z9 540 aa21.18■□□□□ 0.98
SSH2-210ENST00000582084 USP42Q9H9J4 1324 aaKnown RBP21.17■□□□□ 0.98
SSH2-210ENST00000582084 VIRMAQ69YN4 1812 aaKnown RBP21.17■□□□□ 0.98
SSH2-210ENST00000582084 TJP1Q07157 1748 aa21.16■□□□□ 0.98
SSH2-210ENST00000582084 ZPR1O75312 459 aa21.16■□□□□ 0.98
SSH2-210ENST00000582084 CYP19A1P11511 503 aaPredicted RBP21.16■□□□□ 0.98
SSH2-210ENST00000582084 FKBP8Q14318 412 aa21.16■□□□□ 0.98
SSH2-210ENST00000582084 MAPK8IP3Q9UPT6 1336 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms