RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 GNRH1P01148 92 aa11.14□□□□□ -0.63
SMCHD1-207ENST00000581711 IL2RAP01589 272 aa11.14□□□□□ -0.63
SMCHD1-207ENST00000581711 C1orf229Q6ZS94 237 aaPredicted RBP11.14□□□□□ -0.63
SMCHD1-207ENST00000581711 KLRG1Q96E93 195 aa11.14□□□□□ -0.63
SMCHD1-207ENST00000581711 PHF24Q9UPV7 400 aa11.14□□□□□ -0.63
SMCHD1-207ENST00000581711 A0A1B0GTH6 734 aa11.13□□□□□ -0.63
SMCHD1-207ENST00000581711 PHKA2P46019 1235 aa11.13□□□□□ -0.63
SMCHD1-207ENST00000581711 CENPCQ03188 943 aa11.13□□□□□ -0.63
SMCHD1-207ENST00000581711 ZNF330Q9Y3S2 320 aaPredicted RBP11.13□□□□□ -0.63
SMCHD1-207ENST00000581711 RRAGCQ9HB90 399 aa11.12□□□□□ -0.63
SMCHD1-207ENST00000581711 GDF2Q9UK05 429 aaPredicted RBP11.12□□□□□ -0.63
SMCHD1-207ENST00000581711 COL8A1P27658 744 aa11.11□□□□□ -0.63
SMCHD1-207ENST00000581711 BAG6P46379 1132 aa11.11□□□□□ -0.63
SMCHD1-207ENST00000581711 UBAP2LQ14157 1087 aaKnown RBP11.11□□□□□ -0.63
SMCHD1-207ENST00000581711 ALYREFQ86V81 257 aaKnown RBP11.11□□□□□ -0.63
SMCHD1-207ENST00000581711 GPR37L1O60883 481 aa11.1□□□□□ -0.63
SMCHD1-207ENST00000581711 EDARADDQ8WWZ3 215 aa11.1□□□□□ -0.63
SMCHD1-207ENST00000581711 ZSCAN10Q96SZ4 725 aaPredicted RBP11.1□□□□□ -0.63
SMCHD1-207ENST00000581711 HRH3Q9Y5N1 445 aa11.1□□□□□ -0.63
SMCHD1-207ENST00000581711 LBRQ14739 615 aaKnown RBP11.09□□□□□ -0.63
SMCHD1-207ENST00000581711 GOLGA6L1Q8N7Z2 621 aa11.09□□□□□ -0.63
SMCHD1-207ENST00000581711 GNASQ5JWF2 1037 aa11.08□□□□□ -0.64
SMCHD1-207ENST00000581711 FHDC1Q9C0D6 1143 aaPredicted RBP11.08□□□□□ -0.64
SMCHD1-207ENST00000581711 RUBCNLQ9H714 662 aa11.08□□□□□ -0.64
SMCHD1-207ENST00000581711 MYCP01106 439 aaPredicted RBP11.07□□□□□ -0.64
SMCHD1-207ENST00000581711 CSB-PGBD3P0DP91 1061 aa11.07□□□□□ -0.64
SMCHD1-207ENST00000581711 PGBD3Q8N328 593 aa11.07□□□□□ -0.64
SMCHD1-207ENST00000581711 XAGE2Q96GT9 111 aa11.07□□□□□ -0.64
SMCHD1-207ENST00000581711 ATXN7L1Q9ULK2 861 aaPredicted RBP11.07□□□□□ -0.64
SMCHD1-207ENST00000581711 HOXB4P17483 251 aaPredicted RBP11.06□□□□□ -0.64
SMCHD1-207ENST00000581711 C4orf17Q53FE4 359 aa11.06□□□□□ -0.64
SMCHD1-207ENST00000581711 TMEM214Q6NUQ4 689 aaKnown RBP11.06□□□□□ -0.64
SMCHD1-207ENST00000581711 CDCA7Q9BWT1 371 aaPredicted RBP11.06□□□□□ -0.64
SMCHD1-207ENST00000581711 FURINP09958 794 aa11.05□□□□□ -0.64
SMCHD1-207ENST00000581711 BMP4P12644 408 aa11.05□□□□□ -0.64
SMCHD1-207ENST00000581711 MSX1P28360 303 aa11.05□□□□□ -0.64
SMCHD1-207ENST00000581711 GTF2E1P29083 439 aaPredicted RBP11.05□□□□□ -0.64
SMCHD1-207ENST00000581711 GRIN2CQ14957 1233 aa11.05□□□□□ -0.64
SMCHD1-207ENST00000581711 CCDC85AQ96PX6 553 aaPredicted RBP11.05□□□□□ -0.64
SMCHD1-207ENST00000581711 C2CD2LO14523 706 aa11.04□□□□□ -0.64
SMCHD1-207ENST00000581711 AMPD1P23109 780 aa11.04□□□□□ -0.64
SMCHD1-207ENST00000581711 EFHC2Q5JST6 749 aa11.04□□□□□ -0.64
SMCHD1-207ENST00000581711 LINC00114Q6XXX2 140 aa11.04□□□□□ -0.64
SMCHD1-207ENST00000581711 SLCO4C1Q6ZQN7 724 aa11.04□□□□□ -0.64
SMCHD1-207ENST00000581711 ABHD17AQ96GS6 310 aa11.04□□□□□ -0.64
SMCHD1-207ENST00000581711 NDUFB9Q9Y6M9 179 aa11.04□□□□□ -0.64
SMCHD1-207ENST00000581711 SOCS7O14512 581 aa11.03□□□□□ -0.64
SMCHD1-207ENST00000581711 FGFR3P22607 806 aa11.03□□□□□ -0.64
SMCHD1-207ENST00000581711 MTMR14Q8NCE2 650 aa11.03□□□□□ -0.64
SMCHD1-207ENST00000581711 SUV39H2Q9H5I1 410 aa11.03□□□□□ -0.64
SMCHD1-207ENST00000581711 CEP126Q9P2H0 1117 aa11.03□□□□□ -0.64
SMCHD1-207ENST00000581711 GGA1Q9UJY5 639 aa11.03□□□□□ -0.64
SMCHD1-207ENST00000581711 ESCO1Q5FWF5 840 aa11.02□□□□□ -0.65
SMCHD1-207ENST00000581711 NDFIP2Q9NV92 336 aa11.02□□□□□ -0.65
SMCHD1-207ENST00000581711 BNIP3LO60238 219 aa11.01□□□□□ -0.65
SMCHD1-207ENST00000581711 Q8N3U1 123 aa11.01□□□□□ -0.65
SMCHD1-207ENST00000581711 BANK1Q8NDB2 785 aa11.01□□□□□ -0.65
SMCHD1-207ENST00000581711 GNB5O14775 395 aa11□□□□□ -0.65
SMCHD1-207ENST00000581711 CTBSQ01459 385 aa11□□□□□ -0.65
SMCHD1-207ENST00000581711 IL27Q8NEV9 243 aa11□□□□□ -0.65
SMCHD1-207ENST00000581711 RHBDD1Q8TEB9 315 aa11□□□□□ -0.65
SMCHD1-207ENST00000581711 CRISPLD1Q9H336 500 aa10.99□□□□□ -0.65
SMCHD1-207ENST00000581711 PIK3R2O00459 728 aa10.98□□□□□ -0.65
SMCHD1-207ENST00000581711 EPXP11678 715 aa10.98□□□□□ -0.65
SMCHD1-207ENST00000581711 PPARGC1BQ86YN6 1023 aaKnown RBP10.98□□□□□ -0.65
SMCHD1-207ENST00000581711 ETNK1Q9HBU6 452 aa10.98□□□□□ -0.65
SMCHD1-207ENST00000581711 STAU1O95793 577 aaKnown RBP10.97□□□□□ -0.65
SMCHD1-207ENST00000581711 BTBD6Q96KE9 485 aa10.97□□□□□ -0.65
SMCHD1-207ENST00000581711 C1QTNF9BB2RNN3 333 aa10.96□□□□□ -0.65
SMCHD1-207ENST00000581711 ARAFP10398 606 aa10.96□□□□□ -0.65
SMCHD1-207ENST00000581711 DGKGP49619 791 aa10.96□□□□□ -0.65
SMCHD1-207ENST00000581711 TLR1Q15399 786 aa10.96□□□□□ -0.65
SMCHD1-207ENST00000581711 CD163Q86VB7 1156 aa10.96□□□□□ -0.65
SMCHD1-207ENST00000581711 RNF135Q8IUD6 432 aa10.96□□□□□ -0.65
SMCHD1-207ENST00000581711 APBB1O00213 710 aa10.95□□□□□ -0.66
SMCHD1-207ENST00000581711 TSGA10IPQ3SY00 556 aa10.95□□□□□ -0.66
SMCHD1-207ENST00000581711 DNAAF2Q9NVR5 837 aaKnown RBP10.95□□□□□ -0.66
SMCHD1-207ENST00000581711 DOLKQ9UPQ8 538 aa10.95□□□□□ -0.66
SMCHD1-207ENST00000581711 NEURL1BA8MQ27 555 aa10.94□□□□□ -0.66
SMCHD1-207ENST00000581711 PLA2G4AP47712 749 aa10.94□□□□□ -0.66
SMCHD1-207ENST00000581711 FIGNL1Q6PIW4 674 aa10.94□□□□□ -0.66
SMCHD1-207ENST00000581711 TBC1D9Q6ZT07 1266 aa10.94□□□□□ -0.66
SMCHD1-207ENST00000581711 SNRKQ9NRH2 765 aa10.94□□□□□ -0.66
SMCHD1-207ENST00000581711 CHRNA4P43681 627 aa10.93□□□□□ -0.66
SMCHD1-207ENST00000581711 USP4Q13107 963 aa10.93□□□□□ -0.66
SMCHD1-207ENST00000581711 NEUROD2Q15784 382 aa10.93□□□□□ -0.66
SMCHD1-207ENST00000581711 NOP53Q9NZM5 478 aaKnown RBP10.93□□□□□ -0.66
SMCHD1-207ENST00000581711 PCDHGC4Q9Y5F7 938 aa10.93□□□□□ -0.66
SMCHD1-207ENST00000581711 ATP4AP20648 1035 aa10.92□□□□□ -0.66
SMCHD1-207ENST00000581711 KRTAP4-8Q9BYQ9 185 aa10.92□□□□□ -0.66
SMCHD1-207ENST00000581711 ZCCHC2Q9C0B9 1178 aaKnown RBP10.92□□□□□ -0.66
SMCHD1-207ENST00000581711 PHTF2Q8N3S3 785 aa10.91□□□□□ -0.66
SMCHD1-207ENST00000581711 CHSY3Q70JA7 882 aa10.9□□□□□ -0.66
SMCHD1-207ENST00000581711 NLRP8Q86W28 1048 aa10.9□□□□□ -0.66
SMCHD1-207ENST00000581711 C1orf216Q8TAB5 229 aa10.9□□□□□ -0.66
SMCHD1-207ENST00000581711 SLFNL1Q499Z3 407 aa10.89□□□□□ -0.67
SMCHD1-207ENST00000581711 ATXN7O15265 892 aaPredicted RBP10.88□□□□□ -0.67
SMCHD1-207ENST00000581711 ADH6P28332 368 aa10.88□□□□□ -0.67
SMCHD1-207ENST00000581711 SCNN1DP51172 638 aa10.88□□□□□ -0.67
SMCHD1-207ENST00000581711 OXLD1Q5BKU9 147 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms