RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 AK7Q96M32 723 aa16.92■□□□□ 0.3
CDK5RAP3-222ENST00000581708 NUDCQ9Y266 331 aa16.92■□□□□ 0.3
CDK5RAP3-222ENST00000581708 SCN11AQ9UI33 1791 aa16.92■□□□□ 0.3
CDK5RAP3-222ENST00000581708 SSFA2P28290 1259 aa16.91■□□□□ 0.3
CDK5RAP3-222ENST00000581708 ATP6V1AP38606 617 aa16.91■□□□□ 0.3
CDK5RAP3-222ENST00000581708 COL23A1Q86Y22 540 aaPredicted RBP16.91■□□□□ 0.3
CDK5RAP3-222ENST00000581708 PPP2R1AP30153 589 aa16.9■□□□□ 0.3
CDK5RAP3-222ENST00000581708 U2SURPO15042 1029 aaKnown RBP16.89■□□□□ 0.29
CDK5RAP3-222ENST00000581708 RC3H1Q5TC82 1133 aaKnown RBP16.89■□□□□ 0.29
CDK5RAP3-222ENST00000581708 NFATC2IPQ8NCF5 419 aa16.89■□□□□ 0.29
CDK5RAP3-222ENST00000581708 GAS2L2Q8NHY3 880 aa16.89■□□□□ 0.29
CDK5RAP3-222ENST00000581708 SYT17Q9BSW7 474 aa16.89■□□□□ 0.29
CDK5RAP3-222ENST00000581708 FHDC1Q9C0D6 1143 aaPredicted RBP16.89■□□□□ 0.29
CDK5RAP3-222ENST00000581708 UBR3Q6ZT12 1888 aa16.88■□□□□ 0.29
CDK5RAP3-222ENST00000581708 ADAMTS7Q9UKP4 1686 aa16.88■□□□□ 0.29
CDK5RAP3-222ENST00000581708 MRC1P22897 1456 aa16.88■□□□□ 0.29
CDK5RAP3-222ENST00000581708 MSH5O43196 834 aa16.88■□□□□ 0.29
CDK5RAP3-222ENST00000581708 ITPK1Q13572 414 aa16.88■□□□□ 0.29
CDK5RAP3-222ENST00000581708 MTHFSDQ2M296 383 aaKnown RBP16.88■□□□□ 0.29
CDK5RAP3-222ENST00000581708 LINC00116Q8NCU8 138 aa16.88■□□□□ 0.29
CDK5RAP3-222ENST00000581708 SLC52A2Q9HAB3 445 aa16.88■□□□□ 0.29
CDK5RAP3-222ENST00000581708 RNMTO43148 476 aaKnown RBP16.87■□□□□ 0.29
CDK5RAP3-222ENST00000581708 CNGB1Q14028 1251 aaPredicted RBP16.87■□□□□ 0.29
CDK5RAP3-222ENST00000581708 CICQ96RK0 1608 aaPredicted RBP16.87■□□□□ 0.29
CDK5RAP3-222ENST00000581708 CNTNAP4Q9C0A0 1308 aa16.87■□□□□ 0.29
CDK5RAP3-222ENST00000581708 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.86■□□□□ 0.29
CDK5RAP3-222ENST00000581708 ADRA2BP18089 450 aa16.86■□□□□ 0.29
CDK5RAP3-222ENST00000581708 RBM42Q9BTD8 480 aaKnown RBP16.86■□□□□ 0.29
CDK5RAP3-222ENST00000581708 FCHSD2O94868 740 aa16.85■□□□□ 0.29
CDK5RAP3-222ENST00000581708 COL5A3P25940 1745 aaPredicted RBP16.84■□□□□ 0.29
CDK5RAP3-222ENST00000581708 GNAT3A8MTJ3 354 aa16.84■□□□□ 0.29
CDK5RAP3-222ENST00000581708 GNPATO15228 680 aa16.84■□□□□ 0.29
CDK5RAP3-222ENST00000581708 SLC4A9Q96Q91 983 aa16.84■□□□□ 0.29
CDK5RAP3-222ENST00000581708 LGR6Q9HBX8 967 aa16.84■□□□□ 0.29
CDK5RAP3-222ENST00000581708 RTCBQ9Y3I0 505 aaKnown RBP16.84■□□□□ 0.29
CDK5RAP3-222ENST00000581708 RSPH6AQ9H0K4 717 aa16.83■□□□□ 0.28
CDK5RAP3-222ENST00000581708 PTCD1O75127 700 aaKnown RBP16.82■□□□□ 0.28
CDK5RAP3-222ENST00000581708 RPS6KA4O75676 772 aa16.82■□□□□ 0.28
CDK5RAP3-222ENST00000581708 U2AF1L5P0DN76 240 aaPredicted RBP16.82■□□□□ 0.28
CDK5RAP3-222ENST00000581708 U2AF1Q01081 240 aaKnown RBP eCLIP16.82■□□□□ 0.281e-8■□□□□ 9.6
CDK5RAP3-222ENST00000581708 RALBP1Q15311 655 aa16.82■□□□□ 0.28
CDK5RAP3-222ENST00000581708 TRAPPC3LQ5T215 181 aa16.82■□□□□ 0.28
CDK5RAP3-222ENST00000581708 VIRMAQ69YN4 1812 aaKnown RBP16.82■□□□□ 0.28
CDK5RAP3-222ENST00000581708 PRKAR2BP31323 418 aa16.81■□□□□ 0.28
CDK5RAP3-222ENST00000581708 VSIG10Q8N0Z9 540 aa16.81■□□□□ 0.28
CDK5RAP3-222ENST00000581708 PHF14O94880 888 aa16.8■□□□□ 0.28
CDK5RAP3-222ENST00000581708 ZEB1P37275 1124 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-222ENST00000581708 AMIGO3Q86WK7 504 aa16.8■□□□□ 0.28
CDK5RAP3-222ENST00000581708 CD2APQ9Y5K6 639 aa16.8■□□□□ 0.28
CDK5RAP3-222ENST00000581708 CEMIPQ8WUJ3 1361 aa16.79■□□□□ 0.28
CDK5RAP3-222ENST00000581708 HTATSF1O43719 755 aaKnown RBP16.79■□□□□ 0.28
CDK5RAP3-222ENST00000581708 TEFQ10587 303 aa16.79■□□□□ 0.28
CDK5RAP3-222ENST00000581708 NLGN1Q8N2Q7 840 aa16.79■□□□□ 0.28
CDK5RAP3-222ENST00000581708 CRKLP46109 303 aaKnown RBP16.78■□□□□ 0.28
CDK5RAP3-222ENST00000581708 MSL1Q68DK7 614 aa16.78■□□□□ 0.28
CDK5RAP3-222ENST00000581708 IL17REQ8NFR9 667 aa16.78■□□□□ 0.28
CDK5RAP3-222ENST00000581708 PHACTR3Q96KR7 559 aa16.78■□□□□ 0.28
CDK5RAP3-222ENST00000581708 PNNQ9H307 717 aaKnown RBP16.78■□□□□ 0.28
CDK5RAP3-222ENST00000581708 KCPQ6ZWJ8 1503 aa16.77■□□□□ 0.28
CDK5RAP3-222ENST00000581708 TJP1Q07157 1748 aa16.77■□□□□ 0.28
CDK5RAP3-222ENST00000581708 NEFMP07197 916 aa16.77■□□□□ 0.28
CDK5RAP3-222ENST00000581708 TTC5Q8N0Z6 440 aa16.77■□□□□ 0.28
CDK5RAP3-222ENST00000581708 MYH14Q7Z406 1995 aaKnown RBP16.77■□□□□ 0.27
CDK5RAP3-222ENST00000581708 RFC4P35249 363 aa16.76■□□□□ 0.27
CDK5RAP3-222ENST00000581708 ARHGEF1Q92888 912 aaKnown RBP16.76■□□□□ 0.27
CDK5RAP3-222ENST00000581708 TEX13AQ9BXU3 409 aaPredicted RBP16.76■□□□□ 0.27
CDK5RAP3-222ENST00000581708 UBR2Q8IWV8 1755 aa16.76■□□□□ 0.27
CDK5RAP3-222ENST00000581708 SIPA1L3O60292 1781 aaPredicted RBP16.75■□□□□ 0.27
CDK5RAP3-222ENST00000581708 RTF1Q92541 710 aaKnown RBP16.75■□□□□ 0.27
CDK5RAP3-222ENST00000581708 CCDC87Q9NVE4 849 aa16.75■□□□□ 0.27
CDK5RAP3-222ENST00000581708 CYP19A1P11511 503 aaPredicted RBP16.74■□□□□ 0.27
CDK5RAP3-222ENST00000581708 DDX10Q13206 875 aaKnown RBP16.74■□□□□ 0.27
CDK5RAP3-222ENST00000581708 SLC39A6Q13433 755 aa16.74■□□□□ 0.27
CDK5RAP3-222ENST00000581708 ZNF790Q6PG37 636 aa16.74■□□□□ 0.27
CDK5RAP3-222ENST00000581708 KLHL34Q8N239 644 aa16.74■□□□□ 0.27
CDK5RAP3-222ENST00000581708 STARD3NLO95772 234 aa16.73■□□□□ 0.27
CDK5RAP3-222ENST00000581708 INTS5Q6P9B9 1019 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP3-222ENST00000581708 SMIM5Q71RC9 77 aa16.73■□□□□ 0.27
CDK5RAP3-222ENST00000581708 DNAJC10Q8IXB1 793 aa16.73■□□□□ 0.27
CDK5RAP3-222ENST00000581708 MMP10P09238 476 aa16.72■□□□□ 0.27
CDK5RAP3-222ENST00000581708 GYS1P13807 737 aa16.72■□□□□ 0.27
CDK5RAP3-222ENST00000581708 YY1P25490 414 aa16.72■□□□□ 0.27
CDK5RAP3-222ENST00000581708 GPR162Q16538 588 aa16.72■□□□□ 0.27
CDK5RAP3-222ENST00000581708 C4AP0C0L4 1744 aa16.71■□□□□ 0.27
CDK5RAP3-222ENST00000581708 GRIN3BO60391 1043 aa16.71■□□□□ 0.27
CDK5RAP3-222ENST00000581708 NLGN2Q8NFZ4 835 aa16.71■□□□□ 0.27
CDK5RAP3-222ENST00000581708 FMNL2Q96PY5 1086 aa16.71■□□□□ 0.27
CDK5RAP3-222ENST00000581708 HEG1Q9ULI3 1381 aa16.71■□□□□ 0.27
CDK5RAP3-222ENST00000581708 SOS1Q07889 1333 aaPredicted RBP16.7■□□□□ 0.26
CDK5RAP3-222ENST00000581708 MYBBP1AQ9BQG0 1328 aaKnown RBP16.7■□□□□ 0.26
CDK5RAP3-222ENST00000581708 USP42Q9H9J4 1324 aaKnown RBP16.7■□□□□ 0.26
CDK5RAP3-222ENST00000581708 BTBD11A6QL63 1104 aa16.7■□□□□ 0.26
CDK5RAP3-222ENST00000581708 ZNF496Q96IT1 587 aaPredicted RBP16.7■□□□□ 0.26
CDK5RAP3-222ENST00000581708 PLEKHF1Q96S99 279 aa16.7■□□□□ 0.26
CDK5RAP3-222ENST00000581708 CHD4Q14839 1912 aa16.69■□□□□ 0.26
CDK5RAP3-222ENST00000581708 ZPR1O75312 459 aa16.68■□□□□ 0.26
CDK5RAP3-222ENST00000581708 PARP3Q9Y6F1 533 aa16.68■□□□□ 0.26
CDK5RAP3-222ENST00000581708 A0A087WZG4 1122 aa16.67■□□□□ 0.26
CDK5RAP3-222ENST00000581708 TGFB2P61812 414 aa16.67■□□□□ 0.26
CDK5RAP3-222ENST00000581708 NFE2L2Q16236 605 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms