RNA–Protein interactions for RNA: ENST00000581705.5

SNX11-209, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 1,426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-209ENST00000581705 NGEFQ8N5V2 710 aa27.13■■□□□ 1.93
SNX11-209ENST00000581705 TMOD3Q9NYL9 352 aa27.13■■□□□ 1.93
SNX11-209ENST00000581705 POLD1P28340 1107 aa27.12■■□□□ 1.93
SNX11-209ENST00000581705 COL23A1Q86Y22 540 aaPredicted RBP27.12■■□□□ 1.93
SNX11-209ENST00000581705 PNNQ9H307 717 aaKnown RBP27.11■■□□□ 1.93
SNX11-209ENST00000581705 TAF1LQ8IZX4 1826 aa27.1■■□□□ 1.93
SNX11-209ENST00000581705 IL13P35225 146 aa27.1■■□□□ 1.93
SNX11-209ENST00000581705 PLEKHO1Q53GL0 409 aaPredicted RBP27.1■■□□□ 1.93
SNX11-209ENST00000581705 UTRNP46939 3433 aa27.09■■□□□ 1.93
SNX11-209ENST00000581705 MSH5O43196 834 aa27.08■■□□□ 1.93
SNX11-209ENST00000581705 U2AF1L5P0DN76 240 aaPredicted RBP27.08■■□□□ 1.93
SNX11-209ENST00000581705 U2AF1Q01081 240 aaKnown RBP eCLIP27.08■■□□□ 1.93
SNX11-209ENST00000581705 AEBP1Q8IUX7 1158 aa27.08■■□□□ 1.93
SNX11-209ENST00000581705 LOC102724428A0A0B4J2F2 783 aa27.07■■□□□ 1.92
SNX11-209ENST00000581705 YY1P25490 414 aa27.07■■□□□ 1.92
SNX11-209ENST00000581705 SIK1P57059 783 aa27.07■■□□□ 1.92
SNX11-209ENST00000581705 AMOTQ4VCS5 1084 aa27.07■■□□□ 1.92
SNX11-209ENST00000581705 NCBP3Q53F19 620 aaKnown RBP27.07■■□□□ 1.92
SNX11-209ENST00000581705 FLAD1Q8NFF5 587 aa27.07■■□□□ 1.92
SNX11-209ENST00000581705 ASAP1Q9ULH1 1129 aa27.07■■□□□ 1.92
SNX11-209ENST00000581705 HSP90AB1P08238 724 aaKnown RBP27.07■■□□□ 1.92
SNX11-209ENST00000581705 RUNDC1Q96C34 613 aa27.07■■□□□ 1.92
SNX11-209ENST00000581705 KDRP35968 1356 aa27.06■■□□□ 1.92
SNX11-209ENST00000581705 C4BP0C0L5 1744 aa27.06■■□□□ 1.92
SNX11-209ENST00000581705 ERVV-2B6SEH9 535 aa27.06■■□□□ 1.92
SNX11-209ENST00000581705 FCHSD2O94868 740 aa27.06■■□□□ 1.92
SNX11-209ENST00000581705 DCAF5Q96JK2 942 aa27.06■■□□□ 1.92
SNX11-209ENST00000581705 U2SURPO15042 1029 aaKnown RBP27.05■■□□□ 1.92
SNX11-209ENST00000581705 SULT6B1Q6IMI4 303 aa27.05■■□□□ 1.92
SNX11-209ENST00000581705 ATG3Q9NT62 314 aa27.05■■□□□ 1.92
SNX11-209ENST00000581705 ZNF530Q6P9A1 599 aaPredicted RBP27.04■■□□□ 1.92
SNX11-209ENST00000581705 AK7Q96M32 723 aa27.04■■□□□ 1.92
SNX11-209ENST00000581705 LINC00116Q8NCU8 138 aa27.02■■□□□ 1.92
SNX11-209ENST00000581705 AMIGO3Q86WK7 504 aa27.01■■□□□ 1.91
SNX11-209ENST00000581705 KDM6AO15550 1401 aaPredicted RBP27.01■■□□□ 1.91
SNX11-209ENST00000581705 ITPK1Q13572 414 aa27■■□□□ 1.91
SNX11-209ENST00000581705 ATP6V1AP38606 617 aa26.99■■□□□ 1.91
SNX11-209ENST00000581705 MSL1Q68DK7 614 aa26.99■■□□□ 1.91
SNX11-209ENST00000581705 KLHL34Q8N239 644 aa26.99■■□□□ 1.91
SNX11-209ENST00000581705 C1orf141Q5JVX7 400 aa26.99■■□□□ 1.91
SNX11-209ENST00000581705 UBR3Q6ZT12 1888 aa26.98■■□□□ 1.91
SNX11-209ENST00000581705 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.98■■□□□ 1.91
SNX11-209ENST00000581705 PLEKHF1Q96S99 279 aa26.98■■□□□ 1.91
SNX11-209ENST00000581705 SSFA2P28290 1259 aa26.97■■□□□ 1.91
SNX11-209ENST00000581705 RSPH6AQ9H0K4 717 aa26.97■■□□□ 1.91
SNX11-209ENST00000581705 NEFMP07197 916 aa26.96■■□□□ 1.91
SNX11-209ENST00000581705 CABP4P57796 275 aa26.96■■□□□ 1.91
SNX11-209ENST00000581705 CCDC146Q8IYE0 955 aa26.96■■□□□ 1.91
SNX11-209ENST00000581705 PHF14O94880 888 aa26.95■■□□□ 1.9
SNX11-209ENST00000581705 APAF1O14727 1248 aa26.94■■□□□ 1.9
SNX11-209ENST00000581705 SMIM5Q71RC9 77 aa26.94■■□□□ 1.9
SNX11-209ENST00000581705 NLGN2Q8NFZ4 835 aa26.94■■□□□ 1.9
SNX11-209ENST00000581705 SLC4A9Q96Q91 983 aa26.94■■□□□ 1.9
SNX11-209ENST00000581705 MAPK8IP3Q9UPT6 1336 aa26.94■■□□□ 1.9
SNX11-209ENST00000581705 GOLGB1Q14789 3259 aaKnown RBP26.93■■□□□ 1.9
SNX11-209ENST00000581705 GNPATO15228 680 aa26.92■■□□□ 1.9
SNX11-209ENST00000581705 CCDC27Q2M243 656 aa26.92■■□□□ 1.9
SNX11-209ENST00000581705 ZNF831Q5JPB2 1677 aa26.92■■□□□ 1.9
SNX11-209ENST00000581705 GPR162Q16538 588 aa26.91■■□□□ 1.9
SNX11-209ENST00000581705 RBM42Q9BTD8 480 aaKnown RBP26.91■■□□□ 1.9
SNX11-209ENST00000581705 HMOX1P09601 288 aa26.9■■□□□ 1.9
SNX11-209ENST00000581705 AKAP4Q5JQC9 854 aa26.9■■□□□ 1.9
SNX11-209ENST00000581705 NFATC2IPQ8NCF5 419 aa26.9■■□□□ 1.9
SNX11-209ENST00000581705 ZNF521Q96K83 1311 aa26.9■■□□□ 1.9
SNX11-209ENST00000581705 PRKAR2BP31323 418 aa26.9■■□□□ 1.9
SNX11-209ENST00000581705 CD2APQ9Y5K6 639 aa26.89■■□□□ 1.89
SNX11-209ENST00000581705 RC3H1Q5TC82 1133 aaKnown RBP26.87■■□□□ 1.89
SNX11-209ENST00000581705 SCN11AQ9UI33 1791 aa26.86■■□□□ 1.89
SNX11-209ENST00000581705 CNTNAP4Q9C0A0 1308 aa26.85■■□□□ 1.89
SNX11-209ENST00000581705 RTCBQ9Y3I0 505 aaKnown RBP26.85■■□□□ 1.89
SNX11-209ENST00000581705 CHD4Q14839 1912 aa26.85■■□□□ 1.89
SNX11-209ENST00000581705 COL5A3P25940 1745 aaPredicted RBP26.84■■□□□ 1.89
SNX11-209ENST00000581705 PTCD1O75127 700 aaKnown RBP26.84■■□□□ 1.89
SNX11-209ENST00000581705 TMPOP42166 694 aaKnown RBP26.84■■□□□ 1.89
SNX11-209ENST00000581705 PELP1Q8IZL8 1130 aaKnown RBP26.84■■□□□ 1.89
SNX11-209ENST00000581705 MTHFSDQ2M296 383 aaKnown RBP26.82■■□□□ 1.88
SNX11-209ENST00000581705 TRAPPC3LQ5T215 181 aa26.82■■□□□ 1.88
SNX11-209ENST00000581705 SLC52A2Q9HAB3 445 aa26.82■■□□□ 1.88
SNX11-209ENST00000581705 LGR6Q9HBX8 967 aa26.82■■□□□ 1.88
SNX11-209ENST00000581705 ADRA2BP18089 450 aa26.82■■□□□ 1.88
SNX11-209ENST00000581705 NFE2L2Q16236 605 aa26.82■■□□□ 1.88
SNX11-209ENST00000581705 RNMTO43148 476 aaKnown RBP26.81■■□□□ 1.88
SNX11-209ENST00000581705 RPS6KA4O75676 772 aa26.81■■□□□ 1.88
SNX11-209ENST00000581705 WDR63Q8IWG1 891 aa26.81■■□□□ 1.88
SNX11-209ENST00000581705 WWC1Q8IX03 1113 aa26.81■■□□□ 1.88
SNX11-209ENST00000581705 SALL2Q9Y467 1007 aaPredicted RBP26.81■■□□□ 1.88
SNX11-209ENST00000581705 MRC1P22897 1456 aa26.8■■□□□ 1.88
SNX11-209ENST00000581705 YBX3P16989 372 aaKnown RBP eCLIP26.8■■□□□ 1.883e-6■□□□□ 8.1
SNX11-209ENST00000581705 GOLGA2Q08379 1002 aa26.8■■□□□ 1.88
SNX11-209ENST00000581705 ZNF784Q8NCA9 323 aaPredicted RBP26.8■■□□□ 1.88
SNX11-209ENST00000581705 LMOD3Q0VAK6 560 aa26.79■■□□□ 1.88
SNX11-209ENST00000581705 ARHGEF1Q92888 912 aaKnown RBP26.79■■□□□ 1.88
SNX11-209ENST00000581705 GRIN3BO60391 1043 aa26.78■■□□□ 1.88
SNX11-209ENST00000581705 PHACTR3Q96KR7 559 aa26.78■■□□□ 1.88
SNX11-209ENST00000581705 MYH14Q7Z406 1995 aaKnown RBP26.78■■□□□ 1.88
SNX11-209ENST00000581705 CICQ96RK0 1608 aaPredicted RBP26.77■■□□□ 1.88
SNX11-209ENST00000581705 ADAMTS7Q9UKP4 1686 aa26.77■■□□□ 1.88
SNX11-209ENST00000581705 MMP10P09238 476 aa26.76■■□□□ 1.87
SNX11-209ENST00000581705 NLGN1Q8N2Q7 840 aa26.76■■□□□ 1.87
SNX11-209ENST00000581705 RFC4P35249 363 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms