RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 CEP126Q9P2H0 1117 aa9.03□□□□□ -0.96
SMCHD1-206ENST00000581631 PROCP04070 461 aa9.01□□□□□ -0.97
SMCHD1-206ENST00000581631 C1orf229Q6ZS94 237 aaPredicted RBP9.01□□□□□ -0.97
SMCHD1-206ENST00000581631 BEND7Q8N7W2 519 aaPredicted RBP9.01□□□□□ -0.97
SMCHD1-206ENST00000581631 MAP2K3P46734 347 aa9□□□□□ -0.97
SMCHD1-206ENST00000581631 PHTF2Q8N3S3 785 aa9□□□□□ -0.97
SMCHD1-206ENST00000581631 NEDD1Q8NHV4 660 aa9□□□□□ -0.97
SMCHD1-206ENST00000581631 SPOCK3Q9BQ16 436 aa9□□□□□ -0.97
SMCHD1-206ENST00000581631 OXCT2Q9BYC2 517 aaPredicted RBP9□□□□□ -0.97
SMCHD1-206ENST00000581631 A0A1B0GTH6 734 aa8.99□□□□□ -0.97
SMCHD1-206ENST00000581631 SHISA8B8ZZ34 492 aa8.99□□□□□ -0.97
SMCHD1-206ENST00000581631 ZSCAN10Q96SZ4 725 aaPredicted RBP8.99□□□□□ -0.97
SMCHD1-206ENST00000581631 SNRPNP63162 240 aaKnown RBP8.98□□□□□ -0.97
SMCHD1-206ENST00000581631 LBRQ14739 615 aaKnown RBP8.98□□□□□ -0.97
SMCHD1-206ENST00000581631 TSGA10IPQ3SY00 556 aa8.98□□□□□ -0.97
SMCHD1-206ENST00000581631 C4orf17Q53FE4 359 aa8.98□□□□□ -0.97
SMCHD1-206ENST00000581631 GPAMQ9HCL2 828 aa8.98□□□□□ -0.97
SMCHD1-206ENST00000581631 CHIC2Q9UKJ5 165 aa8.98□□□□□ -0.97
SMCHD1-206ENST00000581631 NSFL1CQ9UNZ2 370 aaKnown RBP8.98□□□□□ -0.97
SMCHD1-206ENST00000581631 MSTNO14793 375 aa8.97□□□□□ -0.97
SMCHD1-206ENST00000581631 HOXB4P17483 251 aaPredicted RBP8.97□□□□□ -0.97
SMCHD1-206ENST00000581631 PHKA2P46019 1235 aa8.97□□□□□ -0.97
SMCHD1-206ENST00000581631 PODNQ7Z5L7 613 aa8.97□□□□□ -0.97
SMCHD1-206ENST00000581631 KLRG1Q96E93 195 aa8.97□□□□□ -0.97
SMCHD1-206ENST00000581631 NDFIP2Q9NV92 336 aa8.97□□□□□ -0.97
SMCHD1-206ENST00000581631 ADAM23O75077 832 aa8.96□□□□□ -0.98
SMCHD1-206ENST00000581631 MYCP01106 439 aaPredicted RBP8.96□□□□□ -0.98
SMCHD1-206ENST00000581631 STAU1O95793 577 aaKnown RBP8.95□□□□□ -0.98
SMCHD1-206ENST00000581631 IRF5Q13568 498 aa8.95□□□□□ -0.98
SMCHD1-206ENST00000581631 ETNK1Q9HBU6 452 aa8.95□□□□□ -0.98
SMCHD1-206ENST00000581631 APBB1O00213 710 aa8.94□□□□□ -0.98
SMCHD1-206ENST00000581631 C2CD2LO14523 706 aa8.94□□□□□ -0.98
SMCHD1-206ENST00000581631 MSX1P28360 303 aa8.94□□□□□ -0.98
SMCHD1-206ENST00000581631 ESF1Q9H501 851 aaKnown RBP8.94□□□□□ -0.98
SMCHD1-206ENST00000581631 RUBCNLQ9H714 662 aa8.94□□□□□ -0.98
SMCHD1-206ENST00000581631 TBC1D2BQ9UPU7 963 aa8.94□□□□□ -0.98
SMCHD1-206ENST00000581631 KRBA1A5PL33 1030 aa8.93□□□□□ -0.98
SMCHD1-206ENST00000581631 PPARGC1BQ86YN6 1023 aaKnown RBP8.93□□□□□ -0.98
SMCHD1-206ENST00000581631 CRISPLD1Q9H336 500 aa8.93□□□□□ -0.98
SMCHD1-206ENST00000581631 GDF2Q9UK05 429 aaPredicted RBP8.93□□□□□ -0.98
SMCHD1-206ENST00000581631 ATXN7L1Q9ULK2 861 aaPredicted RBP8.93□□□□□ -0.98
SMCHD1-206ENST00000581631 PHF24Q9UPV7 400 aa8.93□□□□□ -0.98
SMCHD1-206ENST00000581631 COL8A1P27658 744 aa8.92□□□□□ -0.98
SMCHD1-206ENST00000581631 ESCO1Q5FWF5 840 aa8.92□□□□□ -0.98
SMCHD1-206ENST00000581631 GNASQ5JWF2 1037 aa8.92□□□□□ -0.98
SMCHD1-206ENST00000581631 GALNT6Q8NCL4 622 aa8.92□□□□□ -0.98
SMCHD1-206ENST00000581631 RHBDD1Q8TEB9 315 aa8.92□□□□□ -0.98
SMCHD1-206ENST00000581631 DNAAF2Q9NVR5 837 aaKnown RBP8.92□□□□□ -0.98
SMCHD1-206ENST00000581631 SCNN1DP51172 638 aa8.91□□□□□ -0.98
SMCHD1-206ENST00000581631 TMEM214Q6NUQ4 689 aaKnown RBP8.91□□□□□ -0.98
SMCHD1-206ENST00000581631 EDARADDQ8WWZ3 215 aa8.91□□□□□ -0.98
SMCHD1-206ENST00000581631 DOLKQ9UPQ8 538 aa8.91□□□□□ -0.98
SMCHD1-206ENST00000581631 BNIP3LO60238 219 aa8.9□□□□□ -0.98
SMCHD1-206ENST00000581631 LINC00114Q6XXX2 140 aa8.9□□□□□ -0.98
SMCHD1-206ENST00000581631 SLCO4C1Q6ZQN7 724 aa8.9□□□□□ -0.98
SMCHD1-206ENST00000581631 ZNF295-AS1Q8N0V1 137 aa8.9□□□□□ -0.98
SMCHD1-206ENST00000581631 GOLGA6L1Q8N7Z2 621 aa8.9□□□□□ -0.98
SMCHD1-206ENST00000581631 ABHD17AQ96GS6 310 aa8.9□□□□□ -0.98
SMCHD1-206ENST00000581631 HCN2Q9UL51 889 aa8.9□□□□□ -0.98
SMCHD1-206ENST00000581631 MKL2Q9ULH7 1088 aa8.9□□□□□ -0.98
SMCHD1-206ENST00000581631 ATP4AP20648 1035 aa8.89□□□□□ -0.99
SMCHD1-206ENST00000581631 FGFR3P22607 806 aa8.89□□□□□ -0.99
SMCHD1-206ENST00000581631 USP4Q13107 963 aa8.89□□□□□ -0.99
SMCHD1-206ENST00000581631 CSB-PGBD3P0DP91 1061 aa8.88□□□□□ -0.99
SMCHD1-206ENST00000581631 EIF4G2P78344 907 aaKnown RBP eCLIP8.88□□□□□ -0.99
SMCHD1-206ENST00000581631 CTBSQ01459 385 aa8.88□□□□□ -0.99
SMCHD1-206ENST00000581631 TLR1Q15399 786 aa8.88□□□□□ -0.99
SMCHD1-206ENST00000581631 EFHC2Q5JST6 749 aa8.88□□□□□ -0.99
SMCHD1-206ENST00000581631 ALYREFQ86V81 257 aaKnown RBP8.88□□□□□ -0.99
SMCHD1-206ENST00000581631 PGBD3Q8N328 593 aa8.88□□□□□ -0.99
SMCHD1-206ENST00000581631 RNF135Q8IUD6 432 aa8.87□□□□□ -0.99
SMCHD1-206ENST00000581631 INHAP05111 366 aa8.86□□□□□ -0.99
SMCHD1-206ENST00000581631 BMP4P12644 408 aa8.86□□□□□ -0.99
SMCHD1-206ENST00000581631 GTF2E1P29083 439 aaPredicted RBP8.86□□□□□ -0.99
SMCHD1-206ENST00000581631 XP32Q5T750 250 aa8.86□□□□□ -0.99
SMCHD1-206ENST00000581631 SUV39H2Q9H5I1 410 aa8.86□□□□□ -0.99
SMCHD1-206ENST00000581631 GGA1Q9UJY5 639 aa8.86□□□□□ -0.99
SMCHD1-206ENST00000581631 EPXP11678 715 aa8.85□□□□□ -0.99
SMCHD1-206ENST00000581631 BAG6P46379 1132 aa8.85□□□□□ -0.99
SMCHD1-206ENST00000581631 PLA2G4AP47712 749 aa8.85□□□□□ -0.99
SMCHD1-206ENST00000581631 SLFNL1Q499Z3 407 aa8.85□□□□□ -0.99
SMCHD1-206ENST00000581631 ARAFP10398 606 aa8.84□□□□□ -0.99
SMCHD1-206ENST00000581631 DGKGP49619 791 aa8.84□□□□□ -0.99
SMCHD1-206ENST00000581631 GDF10P55107 478 aa8.84□□□□□ -0.99
SMCHD1-206ENST00000581631 VAC14Q08AM6 782 aa8.84□□□□□ -0.99
SMCHD1-206ENST00000581631 OXLD1Q5BKU9 147 aa8.84□□□□□ -0.99
SMCHD1-206ENST00000581631 C1orf216Q8TAB5 229 aa8.84□□□□□ -0.99
SMCHD1-206ENST00000581631 ZCCHC2Q9C0B9 1178 aaKnown RBP8.84□□□□□ -0.99
SMCHD1-206ENST00000581631 TBC1D9Q6ZT07 1266 aa8.83□□□□□ -1
SMCHD1-206ENST00000581631 NLRP8Q86W28 1048 aa8.83□□□□□ -1
SMCHD1-206ENST00000581631 SIRT1Q96EB6 747 aa8.83□□□□□ -1
SMCHD1-206ENST00000581631 BTBD6Q96KE9 485 aa8.83□□□□□ -1
SMCHD1-206ENST00000581631 IQSEC3Q9UPP2 1182 aaPredicted RBP8.83□□□□□ -1
SMCHD1-206ENST00000581631 TMEM229AB2RXF0 380 aa8.82□□□□□ -1
SMCHD1-206ENST00000581631 MTFR1Q15390 333 aa8.82□□□□□ -1
SMCHD1-206ENST00000581631 SLC4A9Q96Q91 983 aa8.82□□□□□ -1
SMCHD1-206ENST00000581631 KLF15Q9UIH9 416 aa8.82□□□□□ -1
SMCHD1-206ENST00000581631 PCDHGC4Q9Y5F7 938 aa8.82□□□□□ -1
SMCHD1-206ENST00000581631 K7ELQ4 463 aaPredicted RBP8.81□□□□□ -1
SMCHD1-206ENST00000581631 SMTNP53814 917 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms