RNA–Protein interactions for RNA: ENST00000581514.1

SCN4A-202, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

TSL 3

Gene SCN4A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-202ENST00000581514 GNPATO15228 680 aa20.43■□□□□ 0.86
SCN4A-202ENST00000581514 HSPA5P11021 654 aaKnown RBP20.43■□□□□ 0.86
SCN4A-202ENST00000581514 PANK3Q9H999 370 aa20.43■□□□□ 0.86
SCN4A-202ENST00000581514 KDRP35968 1356 aa20.4■□□□□ 0.86
SCN4A-202ENST00000581514 ZNF831Q5JPB2 1677 aa20.39■□□□□ 0.86
SCN4A-202ENST00000581514 ATP10DQ9P241 1426 aa20.39■□□□□ 0.85
SCN4A-202ENST00000581514 ERVV-2B6SEH9 535 aa20.39■□□□□ 0.85
SCN4A-202ENST00000581514 HSP90AB1P08238 724 aaKnown RBP20.39■□□□□ 0.85
SCN4A-202ENST00000581514 PLEKHO1Q53GL0 409 aaPredicted RBP20.38■□□□□ 0.85
SCN4A-202ENST00000581514 DCAF5Q96JK2 942 aa20.38■□□□□ 0.85
SCN4A-202ENST00000581514 SLC4A9Q96Q91 983 aa20.37■□□□□ 0.85
SCN4A-202ENST00000581514 KDM6AO15550 1401 aaPredicted RBP20.36■□□□□ 0.85
SCN4A-202ENST00000581514 COL5A3P25940 1745 aaPredicted RBP20.36■□□□□ 0.85
SCN4A-202ENST00000581514 ZNF530Q6P9A1 599 aaPredicted RBP20.36■□□□□ 0.85
SCN4A-202ENST00000581514 RBM42Q9BTD8 480 aaKnown RBP20.36■□□□□ 0.85
SCN4A-202ENST00000581514 WWC3Q9ULE0 1092 aa20.36■□□□□ 0.85
SCN4A-202ENST00000581514 ADCY9O60503 1353 aa20.35■□□□□ 0.85
SCN4A-202ENST00000581514 MMP10P09238 476 aa20.35■□□□□ 0.85
SCN4A-202ENST00000581514 AMOTQ4VCS5 1084 aa20.35■□□□□ 0.85
SCN4A-202ENST00000581514 MORC1Q86VD1 984 aa20.35■□□□□ 0.85
SCN4A-202ENST00000581514 RTCBQ9Y3I0 505 aaKnown RBP20.35■□□□□ 0.85
SCN4A-202ENST00000581514 KIF13BQ9NQT8 1826 aa20.34■□□□□ 0.85
SCN4A-202ENST00000581514 TRAPPC3LQ5T215 181 aa20.34■□□□□ 0.85
SCN4A-202ENST00000581514 CABP4P57796 275 aa20.33■□□□□ 0.85
SCN4A-202ENST00000581514 RC3H1Q5TC82 1133 aaKnown RBP20.33■□□□□ 0.85
SCN4A-202ENST00000581514 AEBP1Q8IUX7 1158 aa20.33■□□□□ 0.85
SCN4A-202ENST00000581514 CNTNAP4Q9C0A0 1308 aa20.32■□□□□ 0.84
SCN4A-202ENST00000581514 MYH14Q7Z406 1995 aaKnown RBP20.32■□□□□ 0.84
SCN4A-202ENST00000581514 GPBP1L1Q9HC44 474 aaPredicted RBP20.32■□□□□ 0.84
SCN4A-202ENST00000581514 CICQ96RK0 1608 aaPredicted RBP20.31■□□□□ 0.84
SCN4A-202ENST00000581514 KIAA1551Q9HCM1 1747 aa20.31■□□□□ 0.84
SCN4A-202ENST00000581514 ADRA2BP18089 450 aa20.31■□□□□ 0.84
SCN4A-202ENST00000581514 MTHFSP49914 203 aa20.31■□□□□ 0.84
SCN4A-202ENST00000581514 C1orf141Q5JVX7 400 aa20.31■□□□□ 0.84
SCN4A-202ENST00000581514 NLGN1Q8N2Q7 840 aa20.31■□□□□ 0.84
SCN4A-202ENST00000581514 ARHGEF1Q92888 912 aaKnown RBP20.31■□□□□ 0.84
SCN4A-202ENST00000581514 RPS6KA4O75676 772 aa20.3■□□□□ 0.84
SCN4A-202ENST00000581514 KNSTRNQ9Y448 316 aa20.3■□□□□ 0.84
SCN4A-202ENST00000581514 N4BP2Q86UW6 1770 aaPredicted RBP20.3■□□□□ 0.84
SCN4A-202ENST00000581514 PXDNLA1KZ92 1463 aa20.3■□□□□ 0.84
SCN4A-202ENST00000581514 SULT6B1Q6IMI4 303 aa20.29■□□□□ 0.84
SCN4A-202ENST00000581514 C4AP0C0L4 1744 aa20.29■□□□□ 0.84
SCN4A-202ENST00000581514 CEP350Q5VT06 3117 aa20.29■□□□□ 0.84
SCN4A-202ENST00000581514 GYS1P13807 737 aa20.28■□□□□ 0.84
SCN4A-202ENST00000581514 RFC4P35249 363 aa20.28■□□□□ 0.84
SCN4A-202ENST00000581514 CCER1Q8TC90 406 aaPredicted RBP20.28■□□□□ 0.84
SCN4A-202ENST00000581514 ZNF526Q8TF50 670 aaPredicted RBP20.28■□□□□ 0.84
SCN4A-202ENST00000581514 SCN11AQ9UI33 1791 aa20.28■□□□□ 0.84
SCN4A-202ENST00000581514 C10orf71Q711Q0 1435 aa20.27■□□□□ 0.84
SCN4A-202ENST00000581514 PTCD1O75127 700 aaKnown RBP20.27■□□□□ 0.84
SCN4A-202ENST00000581514 IL13P35225 146 aa20.27■□□□□ 0.84
SCN4A-202ENST00000581514 TGFB2P61812 414 aa20.27■□□□□ 0.84
SCN4A-202ENST00000581514 NFATC2IPQ8NCF5 419 aa20.27■□□□□ 0.84
SCN4A-202ENST00000581514 TJP1Q07157 1748 aa20.25■□□□□ 0.83
SCN4A-202ENST00000581514 AMER1Q5JTC6 1135 aaPredicted RBP20.25■□□□□ 0.83
SCN4A-202ENST00000581514 CCDC87Q9NVE4 849 aa20.25■□□□□ 0.83
SCN4A-202ENST00000581514 A0A0G2JLW4 131 aa20.24■□□□□ 0.83
SCN4A-202ENST00000581514 CRKLP46109 303 aaKnown RBP20.24■□□□□ 0.83
SCN4A-202ENST00000581514 PARP3Q9Y6F1 533 aa20.24■□□□□ 0.83
SCN4A-202ENST00000581514 BRCA1P38398 1863 aaKnown RBP20.23■□□□□ 0.83
SCN4A-202ENST00000581514 BCS1LQ9Y276 419 aa20.23■□□□□ 0.83
SCN4A-202ENST00000581514 AKAP4Q5JQC9 854 aa20.22■□□□□ 0.83
SCN4A-202ENST00000581514 VIRMAQ69YN4 1812 aaKnown RBP20.21■□□□□ 0.83
SCN4A-202ENST00000581514 DPEP1P16444 411 aa20.21■□□□□ 0.83
SCN4A-202ENST00000581514 SRP68Q9UHB9 627 aaKnown RBP20.21■□□□□ 0.83
SCN4A-202ENST00000581514 KIF7Q2M1P5 1343 aa20.2■□□□□ 0.82
SCN4A-202ENST00000581514 USP42Q9H9J4 1324 aaKnown RBP20.2■□□□□ 0.82
SCN4A-202ENST00000581514 INTS5Q6P9B9 1019 aaKnown RBP20.19■□□□□ 0.82
SCN4A-202ENST00000581514 SLC52A2Q9HAB3 445 aa20.19■□□□□ 0.82
SCN4A-202ENST00000581514 KIF3CO14782 793 aa20.18■□□□□ 0.82
SCN4A-202ENST00000581514 FCHSD2O94868 740 aa20.18■□□□□ 0.82
SCN4A-202ENST00000581514 FKBP8Q14318 412 aa20.18■□□□□ 0.82
SCN4A-202ENST00000581514 LGR6Q9HBX8 967 aa20.18■□□□□ 0.82
SCN4A-202ENST00000581514 ADAMTS7Q9UKP4 1686 aa20.18■□□□□ 0.82
SCN4A-202ENST00000581514 ARFGEF1Q9Y6D6 1849 aa20.18■□□□□ 0.82
SCN4A-202ENST00000581514 MRC1P22897 1456 aa20.18■□□□□ 0.82
SCN4A-202ENST00000581514 HMOX1P09601 288 aa20.17■□□□□ 0.82
SCN4A-202ENST00000581514 HSPA6P17066 643 aa20.17■□□□□ 0.82
SCN4A-202ENST00000581514 KCNA3P22001 575 aa20.17■□□□□ 0.82
SCN4A-202ENST00000581514 ARHGAP27Q6ZUM4 889 aa20.17■□□□□ 0.82
SCN4A-202ENST00000581514 RNMTO43148 476 aaKnown RBP20.16■□□□□ 0.82
SCN4A-202ENST00000581514 DDR1Q08345 913 aa20.16■□□□□ 0.82
SCN4A-202ENST00000581514 DNAJC10Q8IXB1 793 aa20.16■□□□□ 0.82
SCN4A-202ENST00000581514 PER1O15534 1290 aaPredicted RBP20.14■□□□□ 0.81
SCN4A-202ENST00000581514 SLC39A6Q13433 755 aa20.14■□□□□ 0.81
SCN4A-202ENST00000581514 KCPQ6ZWJ8 1503 aa20.13■□□□□ 0.81
SCN4A-202ENST00000581514 SOS1Q07889 1333 aaPredicted RBP20.13■□□□□ 0.81
SCN4A-202ENST00000581514 CYP19A1P11511 503 aaPredicted RBP20.13■□□□□ 0.81
SCN4A-202ENST00000581514 MTHFSDQ2M296 383 aaKnown RBP20.13■□□□□ 0.81
SCN4A-202ENST00000581514 PIM2Q9P1W9 311 aa20.13■□□□□ 0.81
SCN4A-202ENST00000581514 POLRMTO00411 1230 aaKnown RBP20.12■□□□□ 0.81
SCN4A-202ENST00000581514 DIAPH1O60610 1272 aaKnown RBP20.12■□□□□ 0.81
SCN4A-202ENST00000581514 ZPR1O75312 459 aa20.12■□□□□ 0.81
SCN4A-202ENST00000581514 TM4SF1P30408 202 aa20.12■□□□□ 0.81
SCN4A-202ENST00000581514 CC2D1BQ5T0F9 858 aaKnown RBP20.12■□□□□ 0.81
SCN4A-202ENST00000581514 USPL1Q5W0Q7 1092 aa20.11■□□□□ 0.81
SCN4A-202ENST00000581514 DALRD3Q5D0E6 543 aaKnown RBP20.1■□□□□ 0.81
SCN4A-202ENST00000581514 AFDNP55196 1824 aaKnown RBP20.09■□□□□ 0.81
SCN4A-202ENST00000581514 UBR2Q8IWV8 1755 aa20.09■□□□□ 0.81
SCN4A-202ENST00000581514 CHRNA5P30532 468 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms