RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 GMPR2Q9P2T1 348 aaKnown RBP8.51□□□□□ -1.05
NF1-220ENST00000581113 NOVA2Q9UNW9 492 aaKnown RBP8.51□□□□□ -1.05
NF1-220ENST00000581113 TTLL8A6PVC2 850 aa8.51□□□□□ -1.05
NF1-220ENST00000581113 SFI1A8K8P3 1242 aa8.51□□□□□ -1.05
NF1-220ENST00000581113 ANKMY2Q8IV38 441 aa8.51□□□□□ -1.05
NF1-220ENST00000581113 XAGE2Q96GT9 111 aa8.51□□□□□ -1.05
NF1-220ENST00000581113 ACIN1Q9UKV3 1341 aaKnown RBP8.5□□□□□ -1.05
NF1-220ENST00000581113 WASLO00401 505 aaPredicted RBP8.5□□□□□ -1.05
NF1-220ENST00000581113 ATG7O95352 703 aa8.5□□□□□ -1.05
NF1-220ENST00000581113 SEC13P55735 322 aa8.5□□□□□ -1.05
NF1-220ENST00000581113 FAM200AQ8TCP9 573 aa8.5□□□□□ -1.05
NF1-220ENST00000581113 SENP2Q9HC62 589 aa8.5□□□□□ -1.05
NF1-220ENST00000581113 FIGNL2A6NMB9 653 aa8.49□□□□□ -1.05
NF1-220ENST00000581113 BACH1O14867 736 aa8.49□□□□□ -1.05
NF1-220ENST00000581113 DKK1O94907 266 aa8.49□□□□□ -1.05
NF1-220ENST00000581113 CENPCQ03188 943 aa8.49□□□□□ -1.05
NF1-220ENST00000581113 TLR1Q15399 786 aa8.49□□□□□ -1.05
NF1-220ENST00000581113 SLC27A3Q5K4L6 730 aa8.49□□□□□ -1.05
NF1-220ENST00000581113 FOXD4L5Q5VV16 416 aaPredicted RBP8.49□□□□□ -1.05
NF1-220ENST00000581113 SOS2Q07890 1332 aaPredicted RBP8.48□□□□□ -1.05
NF1-220ENST00000581113 RNF217Q8TC41 542 aa8.48□□□□□ -1.05
NF1-220ENST00000581113 STK32AQ8WU08 396 aa8.48□□□□□ -1.05
NF1-220ENST00000581113 KIFC2Q96AC6 838 aa8.48□□□□□ -1.05
NF1-220ENST00000581113 ARXQ96QS3 562 aa8.48□□□□□ -1.05
NF1-220ENST00000581113 ZMIZ1Q9ULJ6 1067 aa8.48□□□□□ -1.05
NF1-220ENST00000581113 MAN1A2O60476 641 aa8.47□□□□□ -1.05
NF1-220ENST00000581113 GPC1P35052 558 aa8.47□□□□□ -1.05
NF1-220ENST00000581113 RNF144AP50876 292 aaPredicted RBP8.47□□□□□ -1.05
NF1-220ENST00000581113 SMTNP53814 917 aa8.47□□□□□ -1.05
NF1-220ENST00000581113 ELOAQ14241 798 aaKnown RBP8.47□□□□□ -1.05
NF1-220ENST00000581113 TSEN2Q8NCE0 465 aaKnown RBP8.47□□□□□ -1.05
NF1-220ENST00000581113 TRIM47Q96LD4 638 aa8.47□□□□□ -1.05
NF1-220ENST00000581113 HRH3Q9Y5N1 445 aa8.47□□□□□ -1.05
NF1-220ENST00000581113 SOBPA7XYQ1 873 aa8.46□□□□□ -1.05
NF1-220ENST00000581113 POTECB2RU33 542 aa8.46□□□□□ -1.05
NF1-220ENST00000581113 C11orf95C9JLR9 678 aaPredicted RBP8.46□□□□□ -1.05
NF1-220ENST00000581113 SLC4A9Q96Q91 983 aa8.46□□□□□ -1.05
NF1-220ENST00000581113 ZSCAN10Q96SZ4 725 aaPredicted RBP8.46□□□□□ -1.05
NF1-220ENST00000581113 HINFPQ9BQA5 517 aa8.46□□□□□ -1.05
NF1-220ENST00000581113 DNMT3LQ9UJW3 386 aa8.46□□□□□ -1.05
NF1-220ENST00000581113 GTF2E1P29083 439 aaPredicted RBP8.45□□□□□ -1.06
NF1-220ENST00000581113 TMEM214Q6NUQ4 689 aaKnown RBP8.45□□□□□ -1.06
NF1-220ENST00000581113 PRICKLE2Q7Z3G6 844 aa8.45□□□□□ -1.06
NF1-220ENST00000581113 TNS4Q8IZW8 715 aa8.45□□□□□ -1.06
NF1-220ENST00000581113 FHDC1Q9C0D6 1143 aaPredicted RBP8.45□□□□□ -1.06
NF1-220ENST00000581113 A6NJY4 79 aa8.45□□□□□ -1.06
NF1-220ENST00000581113 LGR5O75473 907 aa8.45□□□□□ -1.06
NF1-220ENST00000581113 CSB-PGBD3P0DP91 1061 aa8.45□□□□□ -1.06
NF1-220ENST00000581113 SNRPBP14678 240 aaKnown RBP8.45□□□□□ -1.06
NF1-220ENST00000581113 TMEM164Q5U3C3 297 aa8.45□□□□□ -1.06
NF1-220ENST00000581113 LYSMD3Q7Z3D4 306 aa8.45□□□□□ -1.06
NF1-220ENST00000581113 GRIP2Q9C0E4 1043 aa8.45□□□□□ -1.06
NF1-220ENST00000581113 M0R2N6 131 aa8.44□□□□□ -1.06
NF1-220ENST00000581113 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.44□□□□□ -1.06
NF1-220ENST00000581113 SCHIP1Q9P0W5 487 aaPredicted RBP8.43□□□□□ -1.06
NF1-220ENST00000581113 EPHA4P54764 986 aa8.42□□□□□ -1.06
NF1-220ENST00000581113 POU4F2Q12837 409 aa8.42□□□□□ -1.06
NF1-220ENST00000581113 MTFR1Q15390 333 aa8.42□□□□□ -1.06
NF1-220ENST00000581113 GNASQ5JWF2 1037 aa8.42□□□□□ -1.06
NF1-220ENST00000581113 TBCELQ5QJ74 424 aa8.42□□□□□ -1.06
NF1-220ENST00000581113 CDK2AP1O14519 115 aa8.41□□□□□ -1.06
NF1-220ENST00000581113 RHOQP17081 205 aa8.41□□□□□ -1.06
NF1-220ENST00000581113 ZNF787Q6DD87 383 aa8.41□□□□□ -1.06
NF1-220ENST00000581113 PPARGC1BQ86YN6 1023 aaKnown RBP8.41□□□□□ -1.06
NF1-220ENST00000581113 SLC9A9Q8IVB4 645 aa8.41□□□□□ -1.06
NF1-220ENST00000581113 NBPF15Q8N660 670 aa8.41□□□□□ -1.06
NF1-220ENST00000581113 TSPAN10Q9H1Z9 355 aaPredicted RBP8.41□□□□□ -1.06
NF1-220ENST00000581113 USP3Q9Y6I4 520 aa8.41□□□□□ -1.06
NF1-220ENST00000581113 PHKA2P46019 1235 aa8.4□□□□□ -1.06
NF1-220ENST00000581113 TAS1R3Q7RTX0 852 aa8.4□□□□□ -1.06
NF1-220ENST00000581113 RETREG2Q8NC44 543 aa8.4□□□□□ -1.06
NF1-220ENST00000581113 RHBDD1Q8TEB9 315 aa8.4□□□□□ -1.06
NF1-220ENST00000581113 IQSEC3Q9UPP2 1182 aaPredicted RBP8.4□□□□□ -1.06
NF1-220ENST00000581113 CARNS1A5YM72 827 aa8.39□□□□□ -1.07
NF1-220ENST00000581113 FOXK2Q01167 660 aa8.39□□□□□ -1.07
NF1-220ENST00000581113 FAM69CQ0P6D2 419 aa8.39□□□□□ -1.07
NF1-220ENST00000581113 SWI5Q1ZZU3 235 aa8.39□□□□□ -1.07
NF1-220ENST00000581113 NBPF10Q6P3W6 841 aaKnown RBP8.39□□□□□ -1.07
NF1-220ENST00000581113 SCG3Q8WXD2 468 aaKnown RBP8.39□□□□□ -1.07
NF1-220ENST00000581113 NIFKQ9BYG3 293 aaKnown RBP8.39□□□□□ -1.07
NF1-220ENST00000581113 CABP1Q9NZU7 370 aa8.39□□□□□ -1.07
NF1-220ENST00000581113 SPATA31C2B4DYI2 1134 aa8.38□□□□□ -1.07
NF1-220ENST00000581113 C4orf17Q53FE4 359 aa8.38□□□□□ -1.07
NF1-220ENST00000581113 TMEM88BA6NKF7 163 aa8.38□□□□□ -1.07
NF1-220ENST00000581113 PRMT3O60678 531 aa8.38□□□□□ -1.07
NF1-220ENST00000581113 PLA2G4AP47712 749 aa8.38□□□□□ -1.07
NF1-220ENST00000581113 PTSQ03393 145 aa8.38□□□□□ -1.07
NF1-220ENST00000581113 GAS2L2Q8NHY3 880 aa8.38□□□□□ -1.07
NF1-220ENST00000581113 CHMP7Q8WUX9 453 aaPredicted RBP8.38□□□□□ -1.07
NF1-220ENST00000581113 PRIMPOLQ96LW4 560 aa8.38□□□□□ -1.07
NF1-220ENST00000581113 PARP3Q9Y6F1 533 aa8.38□□□□□ -1.07
NF1-220ENST00000581113 PPP1R12BO60237 982 aaPredicted RBP8.37□□□□□ -1.07
NF1-220ENST00000581113 TIMMDC1Q9NPL8 285 aa8.37□□□□□ -1.07
NF1-220ENST00000581113 ZNF232Q9UNY5 417 aa8.37□□□□□ -1.07
NF1-220ENST00000581113 CHMP3Q9Y3E7 222 aa8.37□□□□□ -1.07
NF1-220ENST00000581113 ATAD2Q6PL18 1390 aa8.36□□□□□ -1.07
NF1-220ENST00000581113 C21orf2O43822 256 aa8.36□□□□□ -1.07
NF1-220ENST00000581113 CLP1Q92989 425 aaKnown RBP8.36□□□□□ -1.07
NF1-220ENST00000581113 AIDAQ96BJ3 306 aa8.36□□□□□ -1.07
NF1-220ENST00000581113 USTQ9Y2C2 406 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms