RNA–Protein interactions for RNA: ENST00000581029.5

GAPLINC-203, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 613 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-203ENST00000581029 SCN11AQ9UI33 1791 aa11.8□□□□□ -0.52
GAPLINC-203ENST00000581029 LRRC37A3O60309 1634 aa11.8□□□□□ -0.52
GAPLINC-203ENST00000581029 BTBD11A6QL63 1104 aa11.8□□□□□ -0.52
GAPLINC-203ENST00000581029 RXRBP28702 533 aa11.8□□□□□ -0.52
GAPLINC-203ENST00000581029 DUSP27Q5VZP5 1158 aa11.8□□□□□ -0.52
GAPLINC-203ENST00000581029 SLC52A2Q9HAB3 445 aa11.8□□□□□ -0.52
GAPLINC-203ENST00000581029 TSPYL4Q9UJ04 414 aa11.8□□□□□ -0.52
GAPLINC-203ENST00000581029 LAS1LQ9Y4W2 734 aaKnown RBP11.8□□□□□ -0.52
GAPLINC-203ENST00000581029 BCL9O00512 1426 aa11.79□□□□□ -0.52
GAPLINC-203ENST00000581029 THSD7AQ9UPZ6 1657 aa11.79□□□□□ -0.52
GAPLINC-203ENST00000581029 HOXB7P09629 217 aa11.79□□□□□ -0.52
GAPLINC-203ENST00000581029 TTC5Q8N0Z6 440 aa11.79□□□□□ -0.52
GAPLINC-203ENST00000581029 MRC1P22897 1456 aa11.78□□□□□ -0.52
GAPLINC-203ENST00000581029 DCTN1Q14203 1278 aa11.78□□□□□ -0.52
GAPLINC-203ENST00000581029 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.78□□□□□ -0.52
GAPLINC-203ENST00000581029 TMOD3Q9NYL9 352 aa11.78□□□□□ -0.52
GAPLINC-203ENST00000581029 GLI3P10071 1580 aa11.78□□□□□ -0.52
GAPLINC-203ENST00000581029 FANCIQ9NVI1 1328 aa11.78□□□□□ -0.52
GAPLINC-203ENST00000581029 SEPT12Q8IYM1 358 aa11.77□□□□□ -0.53
GAPLINC-203ENST00000581029 CDCA7LQ96GN5 454 aa11.77□□□□□ -0.53
GAPLINC-203ENST00000581029 LGR6Q9HBX8 967 aa11.77□□□□□ -0.53
GAPLINC-203ENST00000581029 MBIPQ9NS73 344 aa11.77□□□□□ -0.53
GAPLINC-203ENST00000581029 SHANK3Q9BYB0 1731 aa11.77□□□□□ -0.53
GAPLINC-203ENST00000581029 KDM6AO15550 1401 aaPredicted RBP11.77□□□□□ -0.53
GAPLINC-203ENST00000581029 VIRMAQ69YN4 1812 aaKnown RBP11.76□□□□□ -0.53
GAPLINC-203ENST00000581029 FAM196AQ6ZSG2 479 aa11.76□□□□□ -0.53
GAPLINC-203ENST00000581029 SMARCC1Q92922 1105 aaPredicted RBP11.76□□□□□ -0.53
GAPLINC-203ENST00000581029 THUMPD2Q9BTF0 503 aaKnown RBP11.76□□□□□ -0.53
GAPLINC-203ENST00000581029 TEX13AQ9BXU3 409 aaPredicted RBP11.76□□□□□ -0.53
GAPLINC-203ENST00000581029 SENP3-EIF4A1A0A087X0R7 540 aa11.75□□□□□ -0.53
GAPLINC-203ENST00000581029 ALDH1L2Q3SY69 923 aa11.75□□□□□ -0.53
GAPLINC-203ENST00000581029 ZNF790Q6PG37 636 aa11.75□□□□□ -0.53
GAPLINC-203ENST00000581029 NFATC2IPQ8NCF5 419 aa11.75□□□□□ -0.53
GAPLINC-203ENST00000581029 FMNL2Q96PY5 1086 aa11.75□□□□□ -0.53
GAPLINC-203ENST00000581029 RCAN3Q9UKA8 241 aa11.75□□□□□ -0.53
GAPLINC-203ENST00000581029 MS4A1P11836 297 aa11.74□□□□□ -0.53
GAPLINC-203ENST00000581029 EXOSC9Q06265 439 aaKnown RBP11.74□□□□□ -0.53
GAPLINC-203ENST00000581029 TWISTNBQ3B726 338 aaPredicted RBP11.74□□□□□ -0.53
GAPLINC-203ENST00000581029 KRT27Q7Z3Y8 459 aa11.74□□□□□ -0.53
GAPLINC-203ENST00000581029 MARCH10Q8NA82 808 aaPredicted RBP11.74□□□□□ -0.53
GAPLINC-203ENST00000581029 SIPA1L3O60292 1781 aaPredicted RBP11.74□□□□□ -0.53
GAPLINC-203ENST00000581029 ZBTB22O15209 634 aa11.73□□□□□ -0.53
GAPLINC-203ENST00000581029 KDM3BQ7LBC6 1761 aa11.73□□□□□ -0.53
GAPLINC-203ENST00000581029 ILDR1Q86SU0 546 aaPredicted RBP11.73□□□□□ -0.53
GAPLINC-203ENST00000581029 VSIG10Q8N0Z9 540 aa11.73□□□□□ -0.53
GAPLINC-203ENST00000581029 TSR2Q969E8 191 aaKnown RBP11.73□□□□□ -0.53
GAPLINC-203ENST00000581029 SPINK5Q9NQ38 1064 aaPredicted RBP11.73□□□□□ -0.53
GAPLINC-203ENST00000581029 IPO8O15397 1037 aaKnown RBP11.72□□□□□ -0.53
GAPLINC-203ENST00000581029 SNRPA1P09661 255 aaKnown RBP11.72□□□□□ -0.53
GAPLINC-203ENST00000581029 BRPF1P55201 1214 aaPredicted RBP11.72□□□□□ -0.53
GAPLINC-203ENST00000581029 EIF4A1P60842 406 aaKnown RBP11.72□□□□□ -0.53
GAPLINC-203ENST00000581029 CCDC30Q5VVM6 783 aa11.72□□□□□ -0.53
GAPLINC-203ENST00000581029 STK31Q9BXU1 1019 aa11.72□□□□□ -0.53
GAPLINC-203ENST00000581029 PRIM1P49642 420 aaKnown RBP11.71□□□□□ -0.53
GAPLINC-203ENST00000581029 SYTL4Q96C24 671 aaPredicted RBP11.71□□□□□ -0.53
GAPLINC-203ENST00000581029 ERBB4Q15303 1308 aa11.7□□□□□ -0.54
GAPLINC-203ENST00000581029 KIF16BQ96L93 1317 aa11.7□□□□□ -0.54
GAPLINC-203ENST00000581029 VAMP4O75379 141 aa11.7□□□□□ -0.54
GAPLINC-203ENST00000581029 NEFLP07196 543 aa11.7□□□□□ -0.54
GAPLINC-203ENST00000581029 KAT6BQ8WYB5 2073 aa11.7□□□□□ -0.54
GAPLINC-203ENST00000581029 CACNA1FO60840 1977 aa11.7□□□□□ -0.54
GAPLINC-203ENST00000581029 ITGB4P16144 1822 aa11.7□□□□□ -0.54
GAPLINC-203ENST00000581029 HEG1Q9ULI3 1381 aa11.69□□□□□ -0.54
GAPLINC-203ENST00000581029 PIGBQ92521 554 aa11.69□□□□□ -0.54
GAPLINC-203ENST00000581029 BCL11BQ9C0K0 894 aaPredicted RBP11.69□□□□□ -0.54
GAPLINC-203ENST00000581029 MIS18AQ9NYP9 233 aa11.69□□□□□ -0.54
GAPLINC-203ENST00000581029 DOT1LQ8TEK3 1739 aa11.69□□□□□ -0.54
GAPLINC-203ENST00000581029 GIGYF1O75420 1035 aaPredicted RBP11.68□□□□□ -0.54
GAPLINC-203ENST00000581029 STARD3NLO95772 234 aa11.68□□□□□ -0.54
GAPLINC-203ENST00000581029 RARSP54136 660 aaKnown RBP11.68□□□□□ -0.54
GAPLINC-203ENST00000581029 C8orf58Q8NAV2 365 aa11.68□□□□□ -0.54
GAPLINC-203ENST00000581029 ARHGAP45Q92619 1136 aa11.68□□□□□ -0.54
GAPLINC-203ENST00000581029 SMC4Q9NTJ3 1288 aa11.68□□□□□ -0.54
GAPLINC-203ENST00000581029 DBF4Q9UBU7 674 aaPredicted RBP11.68□□□□□ -0.54
GAPLINC-203ENST00000581029 RGS17Q9UGC6 210 aaPredicted RBP11.68□□□□□ -0.54
GAPLINC-203ENST00000581029 NHSQ6T4R5 1651 aa11.68□□□□□ -0.54
GAPLINC-203ENST00000581029 TOGARAM1Q9Y4F4 1720 aa11.67□□□□□ -0.54
GAPLINC-203ENST00000581029 CANXP27824 592 aaKnown RBP11.67□□□□□ -0.54
GAPLINC-203ENST00000581029 HDGFL1Q5TGJ6 251 aa11.67□□□□□ -0.54
GAPLINC-203ENST00000581029 POTEAQ6S8J7 498 aa11.67□□□□□ -0.54
GAPLINC-203ENST00000581029 CHMP4BQ9H444 224 aaKnown RBP11.67□□□□□ -0.54
GAPLINC-203ENST00000581029 PAPPAQ13219 1627 aa11.67□□□□□ -0.54
GAPLINC-203ENST00000581029 PTPRCP08575 1304 aa11.66□□□□□ -0.54
GAPLINC-203ENST00000581029 SLC39A6Q13433 755 aa11.66□□□□□ -0.54
GAPLINC-203ENST00000581029 NPM2Q86SE8 214 aaKnown RBP11.66□□□□□ -0.54
GAPLINC-203ENST00000581029 ACSBG1Q96GR2 724 aa11.66□□□□□ -0.54
GAPLINC-203ENST00000581029 ZNF496Q96IT1 587 aaPredicted RBP11.66□□□□□ -0.54
GAPLINC-203ENST00000581029 ATG3Q9NT62 314 aa11.66□□□□□ -0.54
GAPLINC-203ENST00000581029 FOXD4L1Q9NU39 408 aa11.66□□□□□ -0.54
GAPLINC-203ENST00000581029 HYPKQ9NX55 129 aa11.66□□□□□ -0.54
GAPLINC-203ENST00000581029 UBR2Q8IWV8 1755 aa11.66□□□□□ -0.54
GAPLINC-203ENST00000581029 ZNF831Q5JPB2 1677 aa11.65□□□□□ -0.54
GAPLINC-203ENST00000581029 ELL2O00472 640 aaPredicted RBP11.65□□□□□ -0.54
GAPLINC-203ENST00000581029 ERICH6BQ5W0A0 696 aa11.65□□□□□ -0.54
GAPLINC-203ENST00000581029 API5Q9BZZ5 524 aaKnown RBP11.65□□□□□ -0.54
GAPLINC-203ENST00000581029 RGS12O14924 1447 aa11.65□□□□□ -0.54
GAPLINC-203ENST00000581029 PALLDQ8WX93 1383 aa11.65□□□□□ -0.55
GAPLINC-203ENST00000581029 BRWD3Q6RI45 1802 aa11.65□□□□□ -0.55
GAPLINC-203ENST00000581029 RNF123Q5XPI4 1314 aa11.64□□□□□ -0.55
GAPLINC-203ENST00000581029 DDX58O95786 925 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms