RNA–Protein interactions for RNA: ENST00000581000.1

NEK8-205, Transcript of NIMA related kinase 8, humanhuman

TSL 3

Gene NEK8, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK8-205ENST00000581000 TSPYL4Q9UJ04 414 aa17.81■□□□□ 0.44
NEK8-205ENST00000581000 LAS1LQ9Y4W2 734 aaKnown RBP17.81■□□□□ 0.44
NEK8-205ENST00000581000 KDM6AO15550 1401 aaPredicted RBP17.81■□□□□ 0.44
NEK8-205ENST00000581000 WNK3Q9BYP7 1800 aa17.8■□□□□ 0.44
NEK8-205ENST00000581000 RARSP54136 660 aaKnown RBP17.8■□□□□ 0.44
NEK8-205ENST00000581000 SLC52A2Q9HAB3 445 aa17.8■□□□□ 0.44
NEK8-205ENST00000581000 EP400Q96L91 3159 aa17.8■□□□□ 0.44
NEK8-205ENST00000581000 HOXB7P09629 217 aa17.79■□□□□ 0.44
NEK8-205ENST00000581000 CCDC125Q86Z20 511 aa17.79■□□□□ 0.44
NEK8-205ENST00000581000 USP35Q9P2H5 1018 aa17.79■□□□□ 0.44
NEK8-205ENST00000581000 SCN11AQ9UI33 1791 aa17.79■□□□□ 0.44
NEK8-205ENST00000581000 VAMP4O75379 141 aa17.78■□□□□ 0.44
NEK8-205ENST00000581000 RRP1P56182 461 aaKnown RBP17.78■□□□□ 0.44
NEK8-205ENST00000581000 TWISTNBQ3B726 338 aaPredicted RBP17.78■□□□□ 0.44
NEK8-205ENST00000581000 ATRNO75882 1429 aa17.77■□□□□ 0.44
NEK8-205ENST00000581000 SHANK3Q9BYB0 1731 aa17.77■□□□□ 0.44
NEK8-205ENST00000581000 BTBD11A6QL63 1104 aa17.76■□□□□ 0.43
NEK8-205ENST00000581000 ONECUT3O60422 494 aaPredicted RBP17.76■□□□□ 0.43
NEK8-205ENST00000581000 DDB1Q16531 1140 aa17.76■□□□□ 0.43
NEK8-205ENST00000581000 CCDC9Q9Y3X0 531 aaKnown RBP17.76■□□□□ 0.43
NEK8-205ENST00000581000 GJD4Q96KN9 370 aaPredicted RBP17.75■□□□□ 0.43
NEK8-205ENST00000581000 SIPA1L3O60292 1781 aaPredicted RBP17.75■□□□□ 0.43
NEK8-205ENST00000581000 HEG1Q9ULI3 1381 aa17.75■□□□□ 0.43
NEK8-205ENST00000581000 KIF16BQ96L93 1317 aa17.74■□□□□ 0.43
NEK8-205ENST00000581000 KDM3BQ7LBC6 1761 aa17.74■□□□□ 0.43
NEK8-205ENST00000581000 MS4A1P11836 297 aa17.74■□□□□ 0.43
NEK8-205ENST00000581000 CABP4P57796 275 aa17.74■□□□□ 0.43
NEK8-205ENST00000581000 EIF4A1P60842 406 aaKnown RBP17.74■□□□□ 0.43
NEK8-205ENST00000581000 C8orf58Q8NAV2 365 aa17.74■□□□□ 0.43
NEK8-205ENST00000581000 PDE3AQ14432 1141 aa17.73■□□□□ 0.43
NEK8-205ENST00000581000 DDX54Q8TDD1 881 aaKnown RBP17.73■□□□□ 0.43
NEK8-205ENST00000581000 ZNF790Q6PG37 636 aa17.72■□□□□ 0.43
NEK8-205ENST00000581000 NFATC2IPQ8NCF5 419 aa17.72■□□□□ 0.43
NEK8-205ENST00000581000 ARHGAP45Q92619 1136 aa17.72■□□□□ 0.43
NEK8-205ENST00000581000 IPO8O15397 1037 aaKnown RBP17.71■□□□□ 0.43
NEK8-205ENST00000581000 TSPYL6Q8N831 410 aa17.71■□□□□ 0.43
NEK8-205ENST00000581000 SSH1Q8WYL5 1049 aa17.71■□□□□ 0.43
NEK8-205ENST00000581000 GTF3C3Q9Y5Q9 886 aa17.71■□□□□ 0.43
NEK8-205ENST00000581000 BCL9O00512 1426 aa17.71■□□□□ 0.43
NEK8-205ENST00000581000 THSD7AQ9UPZ6 1657 aa17.71■□□□□ 0.42
NEK8-205ENST00000581000 SMC4Q9NTJ3 1288 aa17.7■□□□□ 0.42
NEK8-205ENST00000581000 MIS18AQ9NYP9 233 aa17.7■□□□□ 0.42
NEK8-205ENST00000581000 VIRMAQ69YN4 1812 aaKnown RBP17.7■□□□□ 0.42
NEK8-205ENST00000581000 BCAR3O75815 825 aa17.69■□□□□ 0.42
NEK8-205ENST00000581000 CCDC30Q5VVM6 783 aa17.69■□□□□ 0.42
NEK8-205ENST00000581000 GLI3P10071 1580 aa17.69■□□□□ 0.42
NEK8-205ENST00000581000 AAMPQ13685 434 aa17.68■□□□□ 0.42
NEK8-205ENST00000581000 FAM98CQ17RN3 349 aaKnown RBP17.68■□□□□ 0.42
NEK8-205ENST00000581000 ZKSCAN2Q63HK3 967 aa17.68■□□□□ 0.42
NEK8-205ENST00000581000 TTC5Q8N0Z6 440 aa17.68■□□□□ 0.42
NEK8-205ENST00000581000 TMOD3Q9NYL9 352 aa17.68■□□□□ 0.42
NEK8-205ENST00000581000 MRPL50Q8N5N7 158 aaKnown RBP17.67■□□□□ 0.42
NEK8-205ENST00000581000 GIGYF1O75420 1035 aaPredicted RBP17.66■□□□□ 0.42
NEK8-205ENST00000581000 FKBP8Q14318 412 aa17.66■□□□□ 0.42
NEK8-205ENST00000581000 FMNL2Q96PY5 1086 aa17.66■□□□□ 0.42
NEK8-205ENST00000581000 ELL2O00472 640 aaPredicted RBP17.65■□□□□ 0.42
NEK8-205ENST00000581000 MARCH10Q8NA82 808 aaPredicted RBP17.65■□□□□ 0.42
NEK8-205ENST00000581000 STK31Q9BXU1 1019 aa17.65■□□□□ 0.42
NEK8-205ENST00000581000 PTPRCP08575 1304 aa17.65■□□□□ 0.42
NEK8-205ENST00000581000 PAPPAQ13219 1627 aa17.65■□□□□ 0.42
NEK8-205ENST00000581000 SNRPA1P09661 255 aaKnown RBP17.64■□□□□ 0.41
NEK8-205ENST00000581000 CANXP27824 592 aaKnown RBP17.64■□□□□ 0.41
NEK8-205ENST00000581000 ATF7IPQ6VMQ6 1270 aa17.64■□□□□ 0.41
NEK8-205ENST00000581000 VSIG10Q8N0Z9 540 aa17.64■□□□□ 0.41
NEK8-205ENST00000581000 TOGARAM1Q9Y4F4 1720 aa17.64■□□□□ 0.41
NEK8-205ENST00000581000 KRT24Q2M2I5 525 aa17.63■□□□□ 0.41
NEK8-205ENST00000581000 TEX13AQ9BXU3 409 aaPredicted RBP17.63■□□□□ 0.41
NEK8-205ENST00000581000 API5Q9BZZ5 524 aaKnown RBP17.63■□□□□ 0.41
NEK8-205ENST00000581000 ERBB4Q15303 1308 aa17.63■□□□□ 0.41
NEK8-205ENST00000581000 KCNQ3O43525 872 aa17.62■□□□□ 0.41
NEK8-205ENST00000581000 HDGFL1Q5TGJ6 251 aa17.62■□□□□ 0.41
NEK8-205ENST00000581000 PIGBQ92521 554 aa17.61■□□□□ 0.41
NEK8-205ENST00000581000 FRAT1Q92837 279 aaPredicted RBP17.61■□□□□ 0.41
NEK8-205ENST00000581000 ZNF496Q96IT1 587 aaPredicted RBP17.61■□□□□ 0.41
NEK8-205ENST00000581000 CHMP4BQ9H444 224 aaKnown RBP17.61■□□□□ 0.41
NEK8-205ENST00000581000 DBF4Q9UBU7 674 aaPredicted RBP17.61■□□□□ 0.41
NEK8-205ENST00000581000 NOB1Q9ULX3 412 aaKnown RBP17.61■□□□□ 0.41
NEK8-205ENST00000581000 UBR2Q8IWV8 1755 aa17.61■□□□□ 0.41
NEK8-205ENST00000581000 PLIN1O60240 522 aa17.6■□□□□ 0.41
NEK8-205ENST00000581000 SLC4A2P04920 1241 aa17.6■□□□□ 0.41
NEK8-205ENST00000581000 SLC39A6Q13433 755 aa17.6■□□□□ 0.41
NEK8-205ENST00000581000 DZIP1LQ8IYY4 767 aaKnown RBP17.6■□□□□ 0.41
NEK8-205ENST00000581000 BCL2L13Q9BXK5 485 aa17.6■□□□□ 0.41
NEK8-205ENST00000581000 KCPQ6ZWJ8 1503 aa17.59■□□□□ 0.41
NEK8-205ENST00000581000 TRIM27P14373 513 aa17.59■□□□□ 0.41
NEK8-205ENST00000581000 SEPT12Q8IYM1 358 aa17.59■□□□□ 0.41
NEK8-205ENST00000581000 SMARCC1Q92922 1105 aaPredicted RBP17.59■□□□□ 0.41
NEK8-205ENST00000581000 PRIM1P49642 420 aaKnown RBP17.58■□□□□ 0.4
NEK8-205ENST00000581000 ATG3Q9NT62 314 aa17.58■□□□□ 0.4
NEK8-205ENST00000581000 HYPKQ9NX55 129 aa17.58■□□□□ 0.4
NEK8-205ENST00000581000 CACNA1FO60840 1977 aa17.58■□□□□ 0.4
NEK8-205ENST00000581000 A0A0G2JS52 829 aa17.57■□□□□ 0.4
NEK8-205ENST00000581000 MYT1Q01538 1121 aa17.57■□□□□ 0.4
NEK8-205ENST00000581000 FTSJ3Q8IY81 847 aaKnown RBP17.57■□□□□ 0.4
NEK8-205ENST00000581000 DDX21Q9NR30 783 aaKnown RBP eCLIP17.57■□□□□ 0.4
NEK8-205ENST00000581000 PPP4R2Q9NY27 417 aa17.57■□□□□ 0.4
NEK8-205ENST00000581000 ITGB4P16144 1822 aa17.56■□□□□ 0.4
NEK8-205ENST00000581000 DOT1LQ8TEK3 1739 aa17.56■□□□□ 0.4
NEK8-205ENST00000581000 ABCC4O15439 1325 aa17.56■□□□□ 0.4
NEK8-205ENST00000581000 FLIIQ13045 1269 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms