RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 PCDH11YQ9BZA8 1340 aa7.91□□□□□ -1.14
RNU4ATAC-201ENST00000580972 AFF2P51816 1311 aa7.9□□□□□ -1.14
RNU4ATAC-201ENST00000580972 SPATA31A6Q5VVP1 1343 aa7.9□□□□□ -1.14
RNU4ATAC-201ENST00000580972 EIF2S2P20042 333 aaKnown RBP7.9□□□□□ -1.14
RNU4ATAC-201ENST00000580972 CABP4P57796 275 aa7.9□□□□□ -1.14
RNU4ATAC-201ENST00000580972 PROSER3Q2NL68 480 aa7.9□□□□□ -1.14
RNU4ATAC-201ENST00000580972 ALDH1L2Q3SY69 923 aa7.9□□□□□ -1.14
RNU4ATAC-201ENST00000580972 SKAP1Q86WV1 359 aa7.9□□□□□ -1.14
RNU4ATAC-201ENST00000580972 FNBP4Q8N3X1 1017 aaPredicted RBP7.9□□□□□ -1.14
RNU4ATAC-201ENST00000580972 TMEM57Q8N5G2 664 aa7.9□□□□□ -1.14
RNU4ATAC-201ENST00000580972 DCAF5Q96JK2 942 aa7.9□□□□□ -1.14
RNU4ATAC-201ENST00000580972 PPP4R2Q9NY27 417 aa7.9□□□□□ -1.14
RNU4ATAC-201ENST00000580972 USP21Q9UK80 565 aa7.9□□□□□ -1.14
RNU4ATAC-201ENST00000580972 COL14A1Q05707 1796 aaKnown RBP7.89□□□□□ -1.15
RNU4ATAC-201ENST00000580972 RGS12O14924 1447 aa7.89□□□□□ -1.15
RNU4ATAC-201ENST00000580972 PIP4K2AP48426 406 aaPredicted RBP7.89□□□□□ -1.15
RNU4ATAC-201ENST00000580972 NKX1-1Q15270 411 aaPredicted RBP7.89□□□□□ -1.15
RNU4ATAC-201ENST00000580972 VPS72Q15906 364 aa7.89□□□□□ -1.15
RNU4ATAC-201ENST00000580972 ZKSCAN2Q63HK3 967 aa7.89□□□□□ -1.15
RNU4ATAC-201ENST00000580972 ATF7IPQ6VMQ6 1270 aa7.89□□□□□ -1.15
RNU4ATAC-201ENST00000580972 DZIP1LQ8IYY4 767 aaKnown RBP7.89□□□□□ -1.15
RNU4ATAC-201ENST00000580972 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.89□□□□□ -1.15
RNU4ATAC-201ENST00000580972 MARCH10Q8NA82 808 aaPredicted RBP7.89□□□□□ -1.15
RNU4ATAC-201ENST00000580972 ACSBG1Q96GR2 724 aa7.89□□□□□ -1.15
RNU4ATAC-201ENST00000580972 ZNF496Q96IT1 587 aaPredicted RBP7.89□□□□□ -1.15
RNU4ATAC-201ENST00000580972 RGPD5Q99666 1765 aa7.89□□□□□ -1.15
RNU4ATAC-201ENST00000580972 A0A0G2JS52 829 aa7.88□□□□□ -1.15
RNU4ATAC-201ENST00000580972 F6X3S4 739 aa7.88□□□□□ -1.15
RNU4ATAC-201ENST00000580972 SLC4A2P04920 1241 aa7.88□□□□□ -1.15
RNU4ATAC-201ENST00000580972 FAM182BQ5T319 152 aa7.88□□□□□ -1.15
RNU4ATAC-201ENST00000580972 HDGFL1Q5TGJ6 251 aa7.88□□□□□ -1.15
RNU4ATAC-201ENST00000580972 ZNF790Q6PG37 636 aa7.88□□□□□ -1.15
RNU4ATAC-201ENST00000580972 PIGBQ92521 554 aa7.88□□□□□ -1.15
RNU4ATAC-201ENST00000580972 CHPF2Q9P2E5 772 aa7.88□□□□□ -1.15
RNU4ATAC-201ENST00000580972 MRC1P22897 1456 aa7.87□□□□□ -1.15
RNU4ATAC-201ENST00000580972 TNS2Q63HR2 1409 aa7.87□□□□□ -1.15
RNU4ATAC-201ENST00000580972 HEG1Q9ULI3 1381 aa7.87□□□□□ -1.15
RNU4ATAC-201ENST00000580972 KIF16BQ96L93 1317 aa7.87□□□□□ -1.15
RNU4ATAC-201ENST00000580972 EXOC5O00471 708 aa7.87□□□□□ -1.15
RNU4ATAC-201ENST00000580972 GIGYF1O75420 1035 aaPredicted RBP7.87□□□□□ -1.15
RNU4ATAC-201ENST00000580972 HSP90AB1P08238 724 aaKnown RBP7.87□□□□□ -1.15
RNU4ATAC-201ENST00000580972 BRPF1P55201 1214 aaPredicted RBP7.87□□□□□ -1.15
RNU4ATAC-201ENST00000580972 MYT1Q01538 1121 aa7.87□□□□□ -1.15
RNU4ATAC-201ENST00000580972 PDE3AQ14432 1141 aa7.87□□□□□ -1.15
RNU4ATAC-201ENST00000580972 PTF1AQ7RTS3 328 aa7.87□□□□□ -1.15
RNU4ATAC-201ENST00000580972 ITPRIPQ8IWB1 547 aa7.87□□□□□ -1.15
RNU4ATAC-201ENST00000580972 FTSJ3Q8IY81 847 aaKnown RBP7.87□□□□□ -1.15
RNU4ATAC-201ENST00000580972 PHAXQ9H814 394 aaKnown RBP7.87□□□□□ -1.15
RNU4ATAC-201ENST00000580972 BABAM1Q9NWV8 329 aa7.87□□□□□ -1.15
RNU4ATAC-201ENST00000580972 ASAP1Q9ULH1 1129 aa7.87□□□□□ -1.15
RNU4ATAC-201ENST00000580972 PLEKHG2Q9H7P9 1386 aa7.86□□□□□ -1.15
RNU4ATAC-201ENST00000580972 ABCC4O15439 1325 aa7.86□□□□□ -1.15
RNU4ATAC-201ENST00000580972 PTCD1O75127 700 aaKnown RBP7.86□□□□□ -1.15
RNU4ATAC-201ENST00000580972 PRIM1P49642 420 aaKnown RBP7.86□□□□□ -1.15
RNU4ATAC-201ENST00000580972 MVPQ14764 893 aaKnown RBP7.86□□□□□ -1.15
RNU4ATAC-201ENST00000580972 DDB1Q16531 1140 aa7.86□□□□□ -1.15
RNU4ATAC-201ENST00000580972 ERICH6BQ5W0A0 696 aa7.86□□□□□ -1.15
RNU4ATAC-201ENST00000580972 BARGINQ6ZT62 677 aa7.86□□□□□ -1.15
RNU4ATAC-201ENST00000580972 ZNF428Q96B54 188 aa7.86□□□□□ -1.15
RNU4ATAC-201ENST00000580972 SYTL4Q96C24 671 aaPredicted RBP7.86□□□□□ -1.15
RNU4ATAC-201ENST00000580972 CCDC136Q96JN2 1154 aa7.86□□□□□ -1.15
RNU4ATAC-201ENST00000580972 C1orf115Q9H7X2 142 aa7.86□□□□□ -1.15
RNU4ATAC-201ENST00000580972 PCDHB15Q9Y5E8 787 aa7.86□□□□□ -1.15
RNU4ATAC-201ENST00000580972 USP16Q9Y5T5 823 aa7.86□□□□□ -1.15
RNU4ATAC-201ENST00000580972 NRAPQ86VF7 1730 aa7.86□□□□□ -1.15
RNU4ATAC-201ENST00000580972 PLCH1Q4KWH8 1693 aa7.86□□□□□ -1.15
RNU4ATAC-201ENST00000580972 ERVV-2B6SEH9 535 aa7.85□□□□□ -1.15
RNU4ATAC-201ENST00000580972 KCNQ2O43526 872 aa7.85□□□□□ -1.15
RNU4ATAC-201ENST00000580972 FLIIQ13045 1269 aa7.85□□□□□ -1.15
RNU4ATAC-201ENST00000580972 PDIA6Q15084 440 aa7.85□□□□□ -1.15
RNU4ATAC-201ENST00000580972 CCDC30Q5VVM6 783 aa7.85□□□□□ -1.15
RNU4ATAC-201ENST00000580972 SLC4A9Q96Q91 983 aa7.85□□□□□ -1.15
RNU4ATAC-201ENST00000580972 ATG3Q9NT62 314 aa7.85□□□□□ -1.15
RNU4ATAC-201ENST00000580972 TMOD3Q9NYL9 352 aa7.85□□□□□ -1.15
RNU4ATAC-201ENST00000580972 THRAP3Q9Y2W1 955 aaKnown RBP7.85□□□□□ -1.15
RNU4ATAC-201ENST00000580972 ATRNO75882 1429 aa7.85□□□□□ -1.15
RNU4ATAC-201ENST00000580972 PKD1L3Q7Z443 1732 aa7.84□□□□□ -1.15
RNU4ATAC-201ENST00000580972 ADAMTS7Q9UKP4 1686 aa7.84□□□□□ -1.15
RNU4ATAC-201ENST00000580972 IPO8O15397 1037 aaKnown RBP7.84□□□□□ -1.15
RNU4ATAC-201ENST00000580972 IGHDP01880 384 aa7.84□□□□□ -1.15
RNU4ATAC-201ENST00000580972 TTC5Q8N0Z6 440 aa7.84□□□□□ -1.15
RNU4ATAC-201ENST00000580972 GJD4Q96KN9 370 aaPredicted RBP7.84□□□□□ -1.15
RNU4ATAC-201ENST00000580972 STK31Q9BXU1 1019 aa7.84□□□□□ -1.15
RNU4ATAC-201ENST00000580972 API5Q9BZZ5 524 aaKnown RBP7.84□□□□□ -1.15
RNU4ATAC-201ENST00000580972 NBPF26B4DH59 902 aa7.83□□□□□ -1.16
RNU4ATAC-201ENST00000580972 A1BGP04217 495 aa7.83□□□□□ -1.16
RNU4ATAC-201ENST00000580972 HOXB7P09629 217 aa7.83□□□□□ -1.16
RNU4ATAC-201ENST00000580972 MYL6BP14649 208 aa7.83□□□□□ -1.16
RNU4ATAC-201ENST00000580972 FKBP5Q13451 457 aaPredicted RBP7.83□□□□□ -1.16
RNU4ATAC-201ENST00000580972 NBPF14Q5TI25 921 aa7.83□□□□□ -1.16
RNU4ATAC-201ENST00000580972 NBPF10Q6P3W6 841 aaKnown RBP7.83□□□□□ -1.16
RNU4ATAC-201ENST00000580972 SLC4A10Q6U841 1118 aa7.83□□□□□ -1.16
RNU4ATAC-201ENST00000580972 LRP10Q7Z4F1 713 aa7.83□□□□□ -1.16
RNU4ATAC-201ENST00000580972 DNAJC10Q8IXB1 793 aa7.83□□□□□ -1.16
RNU4ATAC-201ENST00000580972 SEPT12Q8IYM1 358 aa7.83□□□□□ -1.16
RNU4ATAC-201ENST00000580972 NBPF15Q8N660 670 aa7.83□□□□□ -1.16
RNU4ATAC-201ENST00000580972 ARHGAP45Q92619 1136 aa7.83□□□□□ -1.16
RNU4ATAC-201ENST00000580972 FMNL2Q96PY5 1086 aa7.83□□□□□ -1.16
RNU4ATAC-201ENST00000580972 RBM42Q9BTD8 480 aaKnown RBP7.83□□□□□ -1.16
RNU4ATAC-201ENST00000580972 CDCA7Q9BWT1 371 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms