RNA–Protein interactions for RNA: ENST00000580898.5

PGAP3-207, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 4

Gene PGAP3, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-207ENST00000580898 GNPATO15228 680 aa18.48■□□□□ 0.55
PGAP3-207ENST00000580898 CABP4P57796 275 aa18.48■□□□□ 0.55
PGAP3-207ENST00000580898 LINC00116Q8NCU8 138 aa18.48■□□□□ 0.55
PGAP3-207ENST00000580898 ATG3Q9NT62 314 aa18.48■□□□□ 0.55
PGAP3-207ENST00000580898 KIF7Q2M1P5 1343 aa18.47■□□□□ 0.55
PGAP3-207ENST00000580898 MTHFSP49914 203 aa18.46■□□□□ 0.55
PGAP3-207ENST00000580898 SULT6B1Q6IMI4 303 aa18.46■□□□□ 0.55
PGAP3-207ENST00000580898 RBM42Q9BTD8 480 aaKnown RBP18.46■□□□□ 0.55
PGAP3-207ENST00000580898 UBR3Q6ZT12 1888 aa18.46■□□□□ 0.54
PGAP3-207ENST00000580898 ITPK1Q13572 414 aa18.45■□□□□ 0.54
PGAP3-207ENST00000580898 AMER1Q5JTC6 1135 aaPredicted RBP18.45■□□□□ 0.54
PGAP3-207ENST00000580898 RTCBQ9Y3I0 505 aaKnown RBP18.45■□□□□ 0.54
PGAP3-207ENST00000580898 KDRP35968 1356 aa18.44■□□□□ 0.54
PGAP3-207ENST00000580898 IL13P35225 146 aa18.43■□□□□ 0.54
PGAP3-207ENST00000580898 AEBP1Q8IUX7 1158 aa18.43■□□□□ 0.54
PGAP3-207ENST00000580898 ZNF831Q5JPB2 1677 aa18.43■□□□□ 0.54
PGAP3-207ENST00000580898 KDM6AO15550 1401 aaPredicted RBP18.42■□□□□ 0.54
PGAP3-207ENST00000580898 ADRA2BP18089 450 aa18.42■□□□□ 0.54
PGAP3-207ENST00000580898 TRAPPC3LQ5T215 181 aa18.42■□□□□ 0.54
PGAP3-207ENST00000580898 RC3H1Q5TC82 1133 aaKnown RBP18.42■□□□□ 0.54
PGAP3-207ENST00000580898 YBX3P16989 372 aaKnown RBP eCLIP18.41■□□□□ 0.54
PGAP3-207ENST00000580898 AMIGO3Q86WK7 504 aa18.41■□□□□ 0.54
PGAP3-207ENST00000580898 UTRNP46939 3433 aa18.41■□□□□ 0.54
PGAP3-207ENST00000580898 CNTNAP4Q9C0A0 1308 aa18.41■□□□□ 0.54
PGAP3-207ENST00000580898 AKAP4Q5JQC9 854 aa18.4■□□□□ 0.54
PGAP3-207ENST00000580898 NLGN1Q8N2Q7 840 aa18.39■□□□□ 0.53
PGAP3-207ENST00000580898 RFC4P35249 363 aa18.38■□□□□ 0.53
PGAP3-207ENST00000580898 SMIM5Q71RC9 77 aa18.38■□□□□ 0.53
PGAP3-207ENST00000580898 NFATC2IPQ8NCF5 419 aa18.38■□□□□ 0.53
PGAP3-207ENST00000580898 DIAPH1O60610 1272 aaKnown RBP18.37■□□□□ 0.53
PGAP3-207ENST00000580898 PTCD1O75127 700 aaKnown RBP18.37■□□□□ 0.53
PGAP3-207ENST00000580898 RPS6KA4O75676 772 aa18.37■□□□□ 0.53
PGAP3-207ENST00000580898 CC2D1BQ5T0F9 858 aaKnown RBP18.37■□□□□ 0.53
PGAP3-207ENST00000580898 PER1O15534 1290 aaPredicted RBP18.36■□□□□ 0.53
PGAP3-207ENST00000580898 GIGYF1O75420 1035 aaPredicted RBP18.36■□□□□ 0.53
PGAP3-207ENST00000580898 MMP10P09238 476 aa18.36■□□□□ 0.53
PGAP3-207ENST00000580898 SLC4A9Q96Q91 983 aa18.36■□□□□ 0.53
PGAP3-207ENST00000580898 COL5A3P25940 1745 aaPredicted RBP18.35■□□□□ 0.53
PGAP3-207ENST00000580898 NPC1L1Q9UHC9 1359 aa18.35■□□□□ 0.53
PGAP3-207ENST00000580898 ARHGEF1Q92888 912 aaKnown RBP18.35■□□□□ 0.53
PGAP3-207ENST00000580898 HMOX1P09601 288 aa18.34■□□□□ 0.53
PGAP3-207ENST00000580898 CCDC87Q9NVE4 849 aa18.34■□□□□ 0.53
PGAP3-207ENST00000580898 CRKLP46109 303 aaKnown RBP18.33■□□□□ 0.52
PGAP3-207ENST00000580898 C1QTNF8P60827 252 aa18.33■□□□□ 0.52
PGAP3-207ENST00000580898 TGFB2P61812 414 aa18.33■□□□□ 0.52
PGAP3-207ENST00000580898 SLC52A2Q9HAB3 445 aa18.33■□□□□ 0.52
PGAP3-207ENST00000580898 PARP3Q9Y6F1 533 aa18.33■□□□□ 0.52
PGAP3-207ENST00000580898 SCN11AQ9UI33 1791 aa18.32■□□□□ 0.52
PGAP3-207ENST00000580898 CICQ96RK0 1608 aaPredicted RBP18.31■□□□□ 0.52
PGAP3-207ENST00000580898 GYS1P13807 737 aa18.31■□□□□ 0.52
PGAP3-207ENST00000580898 RNMTO43148 476 aaKnown RBP18.3■□□□□ 0.52
PGAP3-207ENST00000580898 MRC1P22897 1456 aa18.3■□□□□ 0.52
PGAP3-207ENST00000580898 SENP3-EIF4A1A0A087X0R7 540 aa18.28■□□□□ 0.52
PGAP3-207ENST00000580898 U2SURPO15042 1029 aaKnown RBP18.28■□□□□ 0.52
PGAP3-207ENST00000580898 MTHFSDQ2M296 383 aaKnown RBP18.28■□□□□ 0.52
PGAP3-207ENST00000580898 CFAP53Q96M91 514 aa18.28■□□□□ 0.52
PGAP3-207ENST00000580898 LGR6Q9HBX8 967 aa18.28■□□□□ 0.52
PGAP3-207ENST00000580898 C10orf71Q711Q0 1435 aa18.28■□□□□ 0.52
PGAP3-207ENST00000580898 ATP10DQ9P241 1426 aa18.28■□□□□ 0.52
PGAP3-207ENST00000580898 GOLGB1Q14789 3259 aaKnown RBP18.27■□□□□ 0.52
PGAP3-207ENST00000580898 PXDNLA1KZ92 1463 aa18.27■□□□□ 0.52
PGAP3-207ENST00000580898 C4AP0C0L4 1744 aa18.27■□□□□ 0.52
PGAP3-207ENST00000580898 TJP1Q07157 1748 aa18.27■□□□□ 0.52
PGAP3-207ENST00000580898 CNGB1Q14028 1251 aaPredicted RBP18.27■□□□□ 0.52
PGAP3-207ENST00000580898 GAS2L2Q8NHY3 880 aa18.27■□□□□ 0.52
PGAP3-207ENST00000580898 GPBP1L1Q9HC44 474 aaPredicted RBP18.27■□□□□ 0.52
PGAP3-207ENST00000580898 WWC3Q9ULE0 1092 aa18.27■□□□□ 0.52
PGAP3-207ENST00000580898 USP42Q9H9J4 1324 aaKnown RBP18.26■□□□□ 0.51
PGAP3-207ENST00000580898 ZPR1O75312 459 aa18.26■□□□□ 0.51
PGAP3-207ENST00000580898 TTC5Q8N0Z6 440 aa18.26■□□□□ 0.51
PGAP3-207ENST00000580898 VSIG10Q8N0Z9 540 aa18.26■□□□□ 0.51
PGAP3-207ENST00000580898 KIF13BQ9NQT8 1826 aa18.26■□□□□ 0.51
PGAP3-207ENST00000580898 DNAJC10Q8IXB1 793 aa18.25■□□□□ 0.51
PGAP3-207ENST00000580898 TEFQ10587 303 aa18.24■□□□□ 0.51
PGAP3-207ENST00000580898 INTS5Q6P9B9 1019 aaKnown RBP18.24■□□□□ 0.51
PGAP3-207ENST00000580898 NUDCQ9Y266 331 aa18.24■□□□□ 0.51
PGAP3-207ENST00000580898 BCS1LQ9Y276 419 aa18.24■□□□□ 0.51
PGAP3-207ENST00000580898 ADCY9O60503 1353 aa18.24■□□□□ 0.51
PGAP3-207ENST00000580898 COL3A1P02461 1466 aaPredicted RBP18.24■□□□□ 0.51
PGAP3-207ENST00000580898 ADAMTS7Q9UKP4 1686 aa18.23■□□□□ 0.51
PGAP3-207ENST00000580898 A0A0G2JLW4 131 aa18.23■□□□□ 0.51
PGAP3-207ENST00000580898 GNAT3A8MTJ3 354 aa18.23■□□□□ 0.51
PGAP3-207ENST00000580898 SLC39A6Q13433 755 aa18.23■□□□□ 0.51
PGAP3-207ENST00000580898 SRP68Q9UHB9 627 aaKnown RBP18.23■□□□□ 0.51
PGAP3-207ENST00000580898 SOS1Q07889 1333 aaPredicted RBP18.23■□□□□ 0.51
PGAP3-207ENST00000580898 MYH14Q7Z406 1995 aaKnown RBP18.22■□□□□ 0.51
PGAP3-207ENST00000580898 CYP19A1P11511 503 aaPredicted RBP18.22■□□□□ 0.51
PGAP3-207ENST00000580898 FKBP8Q14318 412 aa18.22■□□□□ 0.51
PGAP3-207ENST00000580898 KCPQ6ZWJ8 1503 aa18.22■□□□□ 0.51
PGAP3-207ENST00000580898 COL15A1P39059 1388 aa18.21■□□□□ 0.51
PGAP3-207ENST00000580898 FCHSD2O94868 740 aa18.21■□□□□ 0.51
PGAP3-207ENST00000580898 STARD3NLO95772 234 aa18.21■□□□□ 0.51
PGAP3-207ENST00000580898 DPEP1P16444 411 aa18.21■□□□□ 0.51
PGAP3-207ENST00000580898 USPL1Q5W0Q7 1092 aa18.2■□□□□ 0.5
PGAP3-207ENST00000580898 TEX13AQ9BXU3 409 aaPredicted RBP18.2■□□□□ 0.5
PGAP3-207ENST00000580898 PIM2Q9P1W9 311 aa18.2■□□□□ 0.5
PGAP3-207ENST00000580898 ZNF526Q8TF50 670 aaPredicted RBP18.19■□□□□ 0.5
PGAP3-207ENST00000580898 KIAA1551Q9HCM1 1747 aa18.19■□□□□ 0.5
PGAP3-207ENST00000580898 NARFQ9UHQ1 456 aa18.19■□□□□ 0.5
PGAP3-207ENST00000580898 N4BP2Q86UW6 1770 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms