RNA–Protein interactions for RNA: ENST00000580886.5

EIF4A1-215, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-215ENST00000580886 RTF1Q92541 710 aaKnown RBP13.1□□□□□ -0.31
EIF4A1-215ENST00000580886 ITGB4P16144 1822 aa13.09□□□□□ -0.31
EIF4A1-215ENST00000580886 KCNQ2O43526 872 aa13.09□□□□□ -0.31
EIF4A1-215ENST00000580886 TAF7Q15545 349 aaPredicted RBP13.09□□□□□ -0.31
EIF4A1-215ENST00000580886 FAM182BQ5T319 152 aa13.09□□□□□ -0.31
EIF4A1-215ENST00000580886 PTF1AQ7RTS3 328 aa13.09□□□□□ -0.31
EIF4A1-215ENST00000580886 NFATC2IPQ8NCF5 419 aa13.09□□□□□ -0.31
EIF4A1-215ENST00000580886 DOT1LQ8TEK3 1739 aa13.09□□□□□ -0.31
EIF4A1-215ENST00000580886 CFAP44Q96MT7 982 aa13.09□□□□□ -0.31
EIF4A1-215ENST00000580886 PAPPAQ13219 1627 aa13.09□□□□□ -0.31
EIF4A1-215ENST00000580886 ZBED9Q6R2W3 1325 aa13.09□□□□□ -0.31
EIF4A1-215ENST00000580886 VIRMAQ69YN4 1812 aaKnown RBP13.09□□□□□ -0.31
EIF4A1-215ENST00000580886 A0A0G2JS52 829 aa13.08□□□□□ -0.32
EIF4A1-215ENST00000580886 MYT1Q01538 1121 aa13.08□□□□□ -0.32
EIF4A1-215ENST00000580886 CALD1Q05682 793 aaKnown RBP13.08□□□□□ -0.32
EIF4A1-215ENST00000580886 NEUROD2Q15784 382 aa13.08□□□□□ -0.32
EIF4A1-215ENST00000580886 THUMPD2Q9BTF0 503 aaKnown RBP13.08□□□□□ -0.32
EIF4A1-215ENST00000580886 IFT57Q9NWB7 429 aa13.08□□□□□ -0.32
EIF4A1-215ENST00000580886 PLSCR1O15162 318 aa13.07□□□□□ -0.32
EIF4A1-215ENST00000580886 SPINK5Q9NQ38 1064 aaPredicted RBP13.07□□□□□ -0.32
EIF4A1-215ENST00000580886 ATG3Q9NT62 314 aa13.07□□□□□ -0.32
EIF4A1-215ENST00000580886 ZNF831Q5JPB2 1677 aa13.07□□□□□ -0.32
EIF4A1-215ENST00000580886 CICQ96RK0 1608 aaPredicted RBP13.06□□□□□ -0.32
EIF4A1-215ENST00000580886 CABP4P57796 275 aa13.06□□□□□ -0.32
EIF4A1-215ENST00000580886 CCDC125Q86Z20 511 aa13.06□□□□□ -0.32
EIF4A1-215ENST00000580886 KDM3BQ7LBC6 1761 aa13.06□□□□□ -0.32
EIF4A1-215ENST00000580886 TNS1Q9HBL0 1735 aaKnown RBP13.05□□□□□ -0.32
EIF4A1-215ENST00000580886 UBR2Q8IWV8 1755 aa13.05□□□□□ -0.32
EIF4A1-215ENST00000580886 KCPQ6ZWJ8 1503 aa13.05□□□□□ -0.32
EIF4A1-215ENST00000580886 SLFN5Q08AF3 891 aa13.05□□□□□ -0.32
EIF4A1-215ENST00000580886 TEFQ10587 303 aa13.05□□□□□ -0.32
EIF4A1-215ENST00000580886 ZNF790Q6PG37 636 aa13.05□□□□□ -0.32
EIF4A1-215ENST00000580886 ACSBG1Q96GR2 724 aa13.05□□□□□ -0.32
EIF4A1-215ENST00000580886 TMOD3Q9NYL9 352 aa13.05□□□□□ -0.32
EIF4A1-215ENST00000580886 RGPD3A6NKT7 1758 aaPredicted RBP13.04□□□□□ -0.32
EIF4A1-215ENST00000580886 RGPD4Q7Z3J3 1758 aa13.04□□□□□ -0.32
EIF4A1-215ENST00000580886 GNAI1P63096 354 aa13.04□□□□□ -0.32
EIF4A1-215ENST00000580886 HNRNPUQ00839 825 aaKnown RBP eCLIP13.04□□□□□ -0.32
EIF4A1-215ENST00000580886 PPP4R3CPQ6ZMV5 832 aa13.04□□□□□ -0.32
EIF4A1-215ENST00000580886 VSIG10Q8N0Z9 540 aa13.04□□□□□ -0.32
EIF4A1-215ENST00000580886 ASAP1Q9ULH1 1129 aa13.04□□□□□ -0.32
EIF4A1-215ENST00000580886 BTAF1O14981 1849 aa13.04□□□□□ -0.32
EIF4A1-215ENST00000580886 LY75O60449 1722 aa13.03□□□□□ -0.32
EIF4A1-215ENST00000580886 BTBD11A6QL63 1104 aa13.03□□□□□ -0.32
EIF4A1-215ENST00000580886 TRIM37O94972 964 aa13.03□□□□□ -0.32
EIF4A1-215ENST00000580886 EIF4A1P60842 406 aaKnown RBP13.03□□□□□ -0.32
EIF4A1-215ENST00000580886 GOLGA2Q08379 1002 aa13.03□□□□□ -0.32
EIF4A1-215ENST00000580886 PROM2Q8N271 834 aa13.03□□□□□ -0.32
EIF4A1-215ENST00000580886 SMARCC1Q92922 1105 aaPredicted RBP13.03□□□□□ -0.32
EIF4A1-215ENST00000580886 SLC4A9Q96Q91 983 aa13.03□□□□□ -0.32
EIF4A1-215ENST00000580886 E9PSI1 815 aa13.02□□□□□ -0.33
EIF4A1-215ENST00000580886 KCNQ3O43525 872 aa13.02□□□□□ -0.33
EIF4A1-215ENST00000580886 UPF1Q92900 1129 aaKnown RBP eCLIP13.02□□□□□ -0.33
EIF4A1-215ENST00000580886 MBIPQ9NS73 344 aa13.02□□□□□ -0.33
EIF4A1-215ENST00000580886 DUSP27Q5VZP5 1158 aa13.01□□□□□ -0.33
EIF4A1-215ENST00000580886 CAMKK2Q96RR4 588 aa13.01□□□□□ -0.33
EIF4A1-215ENST00000580886 SOS1Q07889 1333 aaPredicted RBP13.01□□□□□ -0.33
EIF4A1-215ENST00000580886 PALLDQ8WX93 1383 aa13□□□□□ -0.33
EIF4A1-215ENST00000580886 FANCIQ9NVI1 1328 aa13□□□□□ -0.33
EIF4A1-215ENST00000580886 SENP3-EIF4A1A0A087X0R7 540 aa13□□□□□ -0.33
EIF4A1-215ENST00000580886 HOXB7P09629 217 aa13□□□□□ -0.33
EIF4A1-215ENST00000580886 SLC39A6Q13433 755 aa13□□□□□ -0.33
EIF4A1-215ENST00000580886 CDCA7LQ96GN5 454 aa13□□□□□ -0.33
EIF4A1-215ENST00000580886 ZNF496Q96IT1 587 aaPredicted RBP13□□□□□ -0.33
EIF4A1-215ENST00000580886 MIS18AQ9NYP9 233 aa13□□□□□ -0.33
EIF4A1-215ENST00000580886 SALL2Q9Y467 1007 aaPredicted RBP13□□□□□ -0.33
EIF4A1-215ENST00000580886 GIGYF1O75420 1035 aaPredicted RBP12.99□□□□□ -0.33
EIF4A1-215ENST00000580886 TSPYL4Q9UJ04 414 aa12.99□□□□□ -0.33
EIF4A1-215ENST00000580886 LOC102724428A0A0B4J2F2 783 aa12.98□□□□□ -0.33
EIF4A1-215ENST00000580886 SIK1P57059 783 aa12.98□□□□□ -0.33
EIF4A1-215ENST00000580886 SLC27A3Q5K4L6 730 aa12.98□□□□□ -0.33
EIF4A1-215ENST00000580886 SYTL4Q96C24 671 aaPredicted RBP12.98□□□□□ -0.33
EIF4A1-215ENST00000580886 FMNL2Q96PY5 1086 aa12.98□□□□□ -0.33
EIF4A1-215ENST00000580886 MYH16Q9H6N6 1097 aa12.98□□□□□ -0.33
EIF4A1-215ENST00000580886 APBA3O96018 575 aa12.97□□□□□ -0.33
EIF4A1-215ENST00000580886 C8orf58Q8NAV2 365 aa12.97□□□□□ -0.33
EIF4A1-215ENST00000580886 LRRC4BQ9NT99 713 aa12.97□□□□□ -0.33
EIF4A1-215ENST00000580886 TJP1Q07157 1748 aa12.96□□□□□ -0.33
EIF4A1-215ENST00000580886 VAMP4O75379 141 aa12.96□□□□□ -0.33
EIF4A1-215ENST00000580886 SNRPA1P09661 255 aaKnown RBP12.96□□□□□ -0.33
EIF4A1-215ENST00000580886 CT47B1P0C2W7 299 aaPredicted RBP12.96□□□□□ -0.33
EIF4A1-215ENST00000580886 ITPK1Q13572 414 aa12.96□□□□□ -0.33
EIF4A1-215ENST00000580886 TXNRD1Q16881 649 aa12.96□□□□□ -0.33
EIF4A1-215ENST00000580886 TSR2Q969E8 191 aaKnown RBP12.96□□□□□ -0.33
EIF4A1-215ENST00000580886 TEX13AQ9BXU3 409 aaPredicted RBP12.96□□□□□ -0.33
EIF4A1-215ENST00000580886 C5P01031 1676 aa12.96□□□□□ -0.34
EIF4A1-215ENST00000580886 RREB1Q92766 1687 aa12.96□□□□□ -0.34
EIF4A1-215ENST00000580886 HMGB2P26583 209 aaKnown RBP12.95□□□□□ -0.34
EIF4A1-215ENST00000580886 RC3H1Q5TC82 1133 aaKnown RBP12.95□□□□□ -0.34
EIF4A1-215ENST00000580886 TTC5Q8N0Z6 440 aa12.95□□□□□ -0.34
EIF4A1-215ENST00000580886 COL5A3P25940 1745 aaPredicted RBP12.94□□□□□ -0.34
EIF4A1-215ENST00000580886 CYP19A1P11511 503 aaPredicted RBP12.94□□□□□ -0.34
EIF4A1-215ENST00000580886 EXOSC9Q06265 439 aaKnown RBP12.94□□□□□ -0.34
EIF4A1-215ENST00000580886 KRT24Q2M2I5 525 aa12.94□□□□□ -0.34
EIF4A1-215ENST00000580886 LRP10Q7Z4F1 713 aa12.94□□□□□ -0.34
EIF4A1-215ENST00000580886 TSPYL6Q8N831 410 aa12.94□□□□□ -0.34
EIF4A1-215ENST00000580886 ZNF428Q96B54 188 aa12.94□□□□□ -0.34
EIF4A1-215ENST00000580886 RNF216Q9NWF9 866 aaPredicted RBP12.94□□□□□ -0.34
EIF4A1-215ENST00000580886 USP16Q9Y5T5 823 aa12.94□□□□□ -0.34
EIF4A1-215ENST00000580886 ERBB4Q15303 1308 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms