RNA–Protein interactions for RNA: ENST00000580584.1

PMP22-208, Transcript of peripheral myelin protein 22, humanhuman

TSL 3

Gene PMP22, Length 428 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-208ENST00000580584 FHDC1Q9C0D6 1143 aaPredicted RBP20.91■□□□□ 0.94
PMP22-208ENST00000580584 PPP2R1AP30153 589 aa20.9■□□□□ 0.94
PMP22-208ENST00000580584 ATP6V1AP38606 617 aa20.9■□□□□ 0.94
PMP22-208ENST00000580584 AKAP4Q5JQC9 854 aa20.9■□□□□ 0.94
PMP22-208ENST00000580584 PHF14O94880 888 aa20.89■□□□□ 0.93
PMP22-208ENST00000580584 MTHFSDQ2M296 383 aaKnown RBP20.89■□□□□ 0.93
PMP22-208ENST00000580584 MSL1Q68DK7 614 aa20.88■□□□□ 0.93
PMP22-208ENST00000580584 NFATC2IPQ8NCF5 419 aa20.88■□□□□ 0.93
PMP22-208ENST00000580584 CFAP53Q96M91 514 aa20.88■□□□□ 0.93
PMP22-208ENST00000580584 SLC4A9Q96Q91 983 aa20.88■□□□□ 0.93
PMP22-208ENST00000580584 RBM42Q9BTD8 480 aaKnown RBP20.88■□□□□ 0.93
PMP22-208ENST00000580584 HMGB2P26583 209 aaKnown RBP20.87■□□□□ 0.93
PMP22-208ENST00000580584 POLD1P28340 1107 aa20.87■□□□□ 0.93
PMP22-208ENST00000580584 LGR6Q9HBX8 967 aa20.87■□□□□ 0.93
PMP22-208ENST00000580584 SYT17Q9BSW7 474 aa20.86■□□□□ 0.93
PMP22-208ENST00000580584 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.85■□□□□ 0.93
PMP22-208ENST00000580584 GNPATO15228 680 aa20.85■□□□□ 0.93
PMP22-208ENST00000580584 KLHL34Q8N239 644 aa20.85■□□□□ 0.93
PMP22-208ENST00000580584 COL24A1Q17RW2 1714 aa20.84■□□□□ 0.93
PMP22-208ENST00000580584 MRC1P22897 1456 aa20.84■□□□□ 0.93
PMP22-208ENST00000580584 PTCD1O75127 700 aaKnown RBP20.84■□□□□ 0.93
PMP22-208ENST00000580584 FLAD1Q8NFF5 587 aa20.84■□□□□ 0.93
PMP22-208ENST00000580584 SCN11AQ9UI33 1791 aa20.83■□□□□ 0.93
PMP22-208ENST00000580584 RNMTO43148 476 aaKnown RBP20.83■□□□□ 0.93
PMP22-208ENST00000580584 SLC52A2Q9HAB3 445 aa20.83■□□□□ 0.93
PMP22-208ENST00000580584 UBR3Q6ZT12 1888 aa20.82■□□□□ 0.92
PMP22-208ENST00000580584 SSFA2P28290 1259 aa20.82■□□□□ 0.92
PMP22-208ENST00000580584 MAP3K5Q99683 1374 aa20.82■□□□□ 0.92
PMP22-208ENST00000580584 ZNF831Q5JPB2 1677 aa20.81■□□□□ 0.92
PMP22-208ENST00000580584 PRKAR2BP31323 418 aa20.81■□□□□ 0.92
PMP22-208ENST00000580584 RSPH6AQ9H0K4 717 aa20.81■□□□□ 0.92
PMP22-208ENST00000580584 ADAMTS7Q9UKP4 1686 aa20.8■□□□□ 0.92
PMP22-208ENST00000580584 U2AF1L5P0DN76 240 aaPredicted RBP20.8■□□□□ 0.92
PMP22-208ENST00000580584 U2AF1Q01081 240 aaKnown RBP eCLIP20.8■□□□□ 0.92
PMP22-208ENST00000580584 NUDCQ9Y266 331 aa20.8■□□□□ 0.92
PMP22-208ENST00000580584 GAS2L2Q8NHY3 880 aa20.79■□□□□ 0.92
PMP22-208ENST00000580584 PHACTR3Q96KR7 559 aa20.79■□□□□ 0.92
PMP22-208ENST00000580584 CNTNAP4Q9C0A0 1308 aa20.78■□□□□ 0.92
PMP22-208ENST00000580584 COL5A3P25940 1745 aaPredicted RBP20.78■□□□□ 0.92
PMP22-208ENST00000580584 DCAF8L1A6NGE4 600 aa20.78■□□□□ 0.92
PMP22-208ENST00000580584 SLC39A6Q13433 755 aa20.78■□□□□ 0.92
PMP22-208ENST00000580584 RTCBQ9Y3I0 505 aaKnown RBP20.77■□□□□ 0.92
PMP22-208ENST00000580584 TJP1Q07157 1748 aa20.77■□□□□ 0.92
PMP22-208ENST00000580584 DDX10Q13206 875 aaKnown RBP20.76■□□□□ 0.91
PMP22-208ENST00000580584 NLGN2Q8NFZ4 835 aa20.76■□□□□ 0.91
PMP22-208ENST00000580584 KCPQ6ZWJ8 1503 aa20.76■□□□□ 0.91
PMP22-208ENST00000580584 GNAT3A8MTJ3 354 aa20.75■□□□□ 0.91
PMP22-208ENST00000580584 RC3H1Q5TC82 1133 aaKnown RBP20.75■□□□□ 0.91
PMP22-208ENST00000580584 IL17REQ8NFR9 667 aa20.75■□□□□ 0.91
PMP22-208ENST00000580584 CRKLP46109 303 aaKnown RBP20.74■□□□□ 0.91
PMP22-208ENST00000580584 CICQ96RK0 1608 aaPredicted RBP20.74■□□□□ 0.91
PMP22-208ENST00000580584 TRAPPC3LQ5T215 181 aa20.73■□□□□ 0.91
PMP22-208ENST00000580584 DNAJC10Q8IXB1 793 aa20.73■□□□□ 0.91
PMP22-208ENST00000580584 UTRNP46939 3433 aa20.72■□□□□ 0.91
PMP22-208ENST00000580584 RPS6KA4O75676 772 aa20.72■□□□□ 0.91
PMP22-208ENST00000580584 ARHGEF1Q92888 912 aaKnown RBP20.72■□□□□ 0.91
PMP22-208ENST00000580584 FCHSD2O94868 740 aa20.71■□□□□ 0.91
PMP22-208ENST00000580584 TEFQ10587 303 aa20.71■□□□□ 0.91
PMP22-208ENST00000580584 VIRMAQ69YN4 1812 aaKnown RBP20.71■□□□□ 0.91
PMP22-208ENST00000580584 ADRA2BP18089 450 aa20.7■□□□□ 0.9
PMP22-208ENST00000580584 CEMIPQ8WUJ3 1361 aa20.7■□□□□ 0.9
PMP22-208ENST00000580584 YY1P25490 414 aa20.69■□□□□ 0.9
PMP22-208ENST00000580584 INTS5Q6P9B9 1019 aaKnown RBP20.69■□□□□ 0.9
PMP22-208ENST00000580584 PELP1Q8IZL8 1130 aaKnown RBP20.69■□□□□ 0.9
PMP22-208ENST00000580584 TTC5Q8N0Z6 440 aa20.69■□□□□ 0.9
PMP22-208ENST00000580584 GOLGB1Q14789 3259 aaKnown RBP20.68■□□□□ 0.9
PMP22-208ENST00000580584 MMP10P09238 476 aa20.68■□□□□ 0.9
PMP22-208ENST00000580584 RFC4P35249 363 aa20.68■□□□□ 0.9
PMP22-208ENST00000580584 CCDC87Q9NVE4 849 aa20.68■□□□□ 0.9
PMP22-208ENST00000580584 C4AP0C0L4 1744 aa20.67■□□□□ 0.9
PMP22-208ENST00000580584 UBR2Q8IWV8 1755 aa20.67■□□□□ 0.9
PMP22-208ENST00000580584 CYP19A1P11511 503 aaPredicted RBP20.67■□□□□ 0.9
PMP22-208ENST00000580584 RALBP1Q15311 655 aa20.67■□□□□ 0.9
PMP22-208ENST00000580584 GPR162Q16538 588 aa20.67■□□□□ 0.9
PMP22-208ENST00000580584 MCM10Q7L590 875 aa20.67■□□□□ 0.9
PMP22-208ENST00000580584 MYH14Q7Z406 1995 aaKnown RBP20.66■□□□□ 0.9
PMP22-208ENST00000580584 GYS1P13807 737 aa20.66■□□□□ 0.9
PMP22-208ENST00000580584 ZNF790Q6PG37 636 aa20.66■□□□□ 0.9
PMP22-208ENST00000580584 SRP68Q9UHB9 627 aaKnown RBP20.66■□□□□ 0.9
PMP22-208ENST00000580584 CD2APQ9Y5K6 639 aa20.66■□□□□ 0.9
PMP22-208ENST00000580584 SIPA1L3O60292 1781 aaPredicted RBP20.66■□□□□ 0.9
PMP22-208ENST00000580584 DCTN1Q14203 1278 aa20.65■□□□□ 0.9
PMP22-208ENST00000580584 VSIG10Q8N0Z9 540 aa20.65■□□□□ 0.9
PMP22-208ENST00000580584 RTF1Q92541 710 aaKnown RBP20.65■□□□□ 0.9
PMP22-208ENST00000580584 ZNF496Q96IT1 587 aaPredicted RBP20.65■□□□□ 0.9
PMP22-208ENST00000580584 SOS1Q07889 1333 aaPredicted RBP20.64■□□□□ 0.89
PMP22-208ENST00000580584 NLGN1Q8N2Q7 840 aa20.64■□□□□ 0.89
PMP22-208ENST00000580584 ZBTB1Q9Y2K1 713 aa20.64■□□□□ 0.89
PMP22-208ENST00000580584 USP42Q9H9J4 1324 aaKnown RBP20.63■□□□□ 0.89
PMP22-208ENST00000580584 BTBD11A6QL63 1104 aa20.63■□□□□ 0.89
PMP22-208ENST00000580584 KCNQ3O43525 872 aa20.63■□□□□ 0.89
PMP22-208ENST00000580584 HEG1Q9ULI3 1381 aa20.62■□□□□ 0.89
PMP22-208ENST00000580584 YBX3P16989 372 aaKnown RBP eCLIP20.62■□□□□ 0.89
PMP22-208ENST00000580584 PLEKHF1Q96S99 279 aa20.62■□□□□ 0.89
PMP22-208ENST00000580584 MYBBP1AQ9BQG0 1328 aaKnown RBP20.61■□□□□ 0.89
PMP22-208ENST00000580584 FKBP8Q14318 412 aa20.61■□□□□ 0.89
PMP22-208ENST00000580584 COL15A1P39059 1388 aa20.6■□□□□ 0.89
PMP22-208ENST00000580584 NEFMP07197 916 aa20.6■□□□□ 0.89
PMP22-208ENST00000580584 CANXP27824 592 aaKnown RBP20.6■□□□□ 0.89
PMP22-208ENST00000580584 FMNL2Q96PY5 1086 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms